Gene

KWMTBOMO07242

Pre Gene Modal

BGIBMGA010366

Annotation

AMP-activated_protein_kinase_beta_subunit_[Bombyx_mori]

Location

Bomo_Chr12(-):8957073-8960379      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.937 Nuclear   Reliability : 2.014

CDS

ATGGGGAATGCCGGAAGTAACCAACCCAAAGAATGGCATAAAGATGCTAACAAATCGCCTGATCATGATCAAGGACCTTCATCTCCAGCCAAAGAAGGGGAAGCCTTCACGTTTGATAAAAAGCTAGACGATGATCGAAGTAGTCGAGATGATGACAATAATATAGAAGATGGCGCTCCTTATTATACTAAAGCAGTACCTGAAAGTGATATTGAATACACTGAACAACGTGAGAGATCAAATACTCTCACCGATGGTAGTAAAATAGTCGACGATATTAAAGTATTACCAACAGTTTTCAAATGGGAAGGAGGTGGAAAACAAGTATTTATTTCTGGAACATTTACAGATTGGAAAACTATTCCCATGGTAAAATCACATGGTGATTTTGTTACAATAATAGATTTACCAGAAGGTGAACATCAGTACAAATATTTTGTTGATGGAGAATGGAGGCATGATCCTACAGTGAAAGTAATTGACAATGGAATGGGGTCCAAGAATAATTTAGTAACAGTAAAAATGTCAGATTTTGAGGTATTTCAAGCATTAGCCAAAGACAGTGAGGGTATCCACAGCAGTGCTCAGACTGAATATTCACAGGAAATCCCACAGTCCAAACCATGGGAGAAAGTGTCTGGTCCACCAATATTGCCACCACACCTCTTACAGGTTATACTTAACAAGGATACTCCACTTTCTTGTGAGCCGACTCTACTTCCGGAGCCTAATCATGTGATGTTAAATCACTTGTATGCTTTGTCAATAAAAGATGGAGTTATGGTACTGTCTGCAACACATCGCTATCGCAAGAAATATGTTACCACTCTTCTATACAAGCCAATTTAA

Protein

MGNAGSNQPKEWHKDANKSPDHDQGPSSPAKEGEAFTFDKKLDDDRSSRDDDNNIEDGAPYYTKAVPESDIEYTEQRERSNTLTDGSKIVDDIKVLPTVFKWEGGGKQVFISGTFTDWKTIPMVKSHGDFVTIIDLPEGEHQYKYFVDGEWRHDPTVKVIDNGMGSKNNLVTVKMSDFEVFQALAKDSEGIHSSAQTEYSQEIPQSKPWEKVSGPPILPPHLLQVILNKDTPLSCEPTLLPEPNHVMLNHLYALSIKDGVMVLSATHRYRKKYVTTLLYKPI

Uniprot

A7Y9I6   A0A2A4IX04   A0A2H1X3J5   A0A2W1C1X7   A0A1E1W1J1   A0A3S2NN12   + More
A0A212FG47   S4PDT8   A0A194PHC9   H9JLG5   A0A2A3EE14   A0A087ZYX1   A0A0J7L046   A0A154PCX1   A0A0M9A2V6   E2BMN1   A0A026WYP3   A0A0L7QY23   A0A151XCB6   F4X6P5   A0A151IHE6   A0A158NFS9   A0A195E7I2   A0A195F2K4   A0A195B2N8   A0A3L8DRA8   A0A067QWQ7   K7IWF0   A0A2P8ZDK8   A0A1Y1KLP2   A0A1B6C9V7   A0A2J7R8L6   B0WBL5   A0A1S4JCH8   A0A1Q3FG21   A0A1Q3FHJ1   A0A1W4XM12   A0A1Q3FHU5   A0A310SW51   R4WCW2   U5EPD9   A0A194R0C2   Q5BU46   A0A1S4F115   A0A1B6ENT1   Q17IU7   A0A1B6LXF5   A0A1L8E208   A0A0K8TMV9   A0A182GMW3   A0A023EMP5   A0A023EMP3   D2A2M0   A0A182F205   E0VPY2   W5JC86   A0A1B1PFX7   A0A2M3Z3J1   A0A2M4AAB8   A0A1B6MBH9   A0A182J856   W5J8C7   A0A336KJI6   A0A084VL73   A0A0N7Z9C0   A0A2M4BVP6   A0A0V0G566   A0A1B0CWM8   A0A182W6W3   J3JYW2   A0A182MDU3   A0A182RCN3   N6TDR6   A0A182UX12   A0A182TXB8   A0A182PPQ3   Q7Q442   A0A182HUH0   A0A182XKY4   A0A182L178   A0A182QPK3   A0A182K6Z2   A0A182SI37   A0A182NFC2   N6U9Y0   A0A1I8NLV0   A0A1L8EI01   A0A1A9WBA8   A0A0A9VZC7   A0A0L0CM01   A0A0A9YJN3   A0A146LIT1   T1PFH7   A0A0K8U0B7   N6TSK5   A0A1B0A7J4   W8BRW2   A0A1A9UY73   A0A1A9YIP1   A0A1B0BB20  

Pubmed

28756777    22118469    23622113    26354079    19121390    20798317    + More
24508170    21719571    21347285    30249741    24845553    20075255    29403074    28004739    23691247    17510324    26369729    26483478    24945155    18362917    19820115    20566863    20920257    23761445    24438588    27129103    22516182    23537049    12364791    14747013    17210077    20966253    25401762    26823975    26108605    25315136    24495485   

EMBL

EU126639    ABV09126.1    NWSH01005736    PCG63996.1    ODYU01013127    SOQ59816.1    + More
KZ149911    PZC78113.1    GDQN01010199    JAT80855.1    RSAL01000001    RVE55127.1    AGBW02008720    OWR52706.1    GAIX01003511    JAA89049.1    KQ459603    KPI92816.1    BABH01005820    BABH01005821    BABH01005822    KZ288269    PBC29995.1    LBMM01001634    KMQ95968.1    KQ434875    KZC09779.1    KQ435765    KOX75316.1    GL449275    EFN83049.1    KK107063    EZA61160.1    KQ414697    KOC63513.1    KQ982314    KYQ57987.1    GL888818    EGI57827.1    KQ977647    KYN00823.1    ADTU01014723    KQ979568    KYN20812.1    KQ981864    KYN34324.1    KQ976662    KYM78469.1    QOIP01000005    RLU22822.1    KK852870    KDR14603.1    PYGN01000088    PSN54592.1    GEZM01085001    JAV60326.1    GEDC01027169    GEDC01002674    JAS10129.1    JAS34624.1    NEVH01006721    PNF37178.1    DS231880    EDS42550.1    GFDL01008552    JAV26493.1    GFDL01008027    JAV27018.1    GFDL01007941    JAV27104.1    KQ759870    OAD62426.1    AK417218    BAN20433.1    GANO01000211    JAB59660.1    KQ460883    KPJ11147.1    AY870331    AAX20151.1    GECZ01030175    JAS39594.1    CH477236    EAT46646.1    GEBQ01011589    JAT28388.1    GFDF01001336    JAV12748.1    GDAI01002343    JAI15260.1    JXUM01075154    KQ562872    KXJ74955.1    GAPW01002976    JAC10622.1    GAPW01002975    JAC10623.1    KQ971338    EFA02004.1    DS235379    EEB15438.1    ADMH02001591    ETN61937.1    KX121427    ANT47200.1    GGFM01002331    MBW23082.1    GGFK01004390    MBW37711.1    GEBQ01006728    JAT33249.1    ADMH02001962    ETN60216.1    UFQS01000527    UFQT01000527    SSX04639.1    SSX25002.1    ATLV01014417    KE524970    KFB38717.1    GDKW01000971    JAI55624.1    GGFJ01008015    MBW57156.1    GECL01002936    JAP03188.1    AJWK01032703    AJWK01032704    BT128443    AEE63400.1    AXCM01002282    APGK01033736    KB740888    KB632354    ENN78504.1    ERL93358.1    AAAB01008964    EAA12471.3    APCN01002461    AXCN02000820    APGK01033733    ENN78500.1    GFDG01000429    JAV18370.1    GBHO01045629    GDHC01018340    JAF97974.1    JAQ00289.1    JRES01000204    KNC33296.1    GBHO01011774    GBHO01011773    GBRD01012829    JAG31830.1    JAG31831.1    JAG52997.1    GDHC01010566    JAQ08063.1    KA647547    AFP62176.1    GDHF01032584    JAI19730.1    APGK01020600    KB740224    ENN81023.1    GAMC01010564    JAB95991.1    JXJN01011281    JXJN01011282   

Proteomes

UP000218220    UP000283053    UP000007151    UP000053268    UP000005204    UP000242457    + More
UP000005203    UP000036403    UP000076502    UP000053105    UP000008237    UP000053097    UP000053825    UP000075809    UP000007755    UP000078542    UP000005205    UP000078492    UP000078541    UP000078540    UP000279307    UP000027135    UP000002358    UP000245037    UP000235965    UP000002320    UP000192223    UP000053240    UP000008820    UP000069940    UP000249989    UP000007266    UP000069272    UP000009046    UP000000673    UP000075880    UP000030765    UP000092461    UP000075920    UP000075883    UP000075900    UP000019118    UP000030742    UP000075903    UP000075902    UP000075885    UP000007062    UP000075840    UP000076407    UP000075882    UP000075886    UP000075881    UP000075901    UP000075884    UP000095300    UP000091820    UP000037069    UP000095301    UP000092445    UP000078200    UP000092443    UP000092460   

PRIDE

A7Y9I6    H9JLG5   

Pfam

PF04739   AMPKBI        + More
PF16561   AMPK1_CBM
PF00566   RabGAP-TBC
PF00581   Rhodanese

Interpro

IPR006828   ASC_dom        + More
IPR032640   AMPK1_CBM       
IPR014756   Ig_E-set       
IPR013783   Ig-like_fold       
IPR039160   AMPKB       
IPR037256   ASC_dom_sf       
IPR035969   Rab-GTPase_TBC_sf       
IPR001763   Rhodanese-like_dom       
IPR039755   TBC1D23       
IPR036873   Rhodanese-like_dom_sf       
IPR000195   Rab-GTPase-TBC_dom       

SUPFAM

SSF160219   SSF160219        + More
SSF81296   SSF81296       
SSF52821   SSF52821       
SSF47923   SSF47923       

Gene 3D

2.60.40.10     3.40.250.10    

ProteinModelPortal

A7Y9I6   A0A2A4IX04   A0A2H1X3J5   A0A2W1C1X7   A0A1E1W1J1   A0A3S2NN12   + More
A0A212FG47   S4PDT8   A0A194PHC9   H9JLG5   A0A2A3EE14   A0A087ZYX1   A0A0J7L046   A0A154PCX1   A0A0M9A2V6   E2BMN1   A0A026WYP3   A0A0L7QY23   A0A151XCB6   F4X6P5   A0A151IHE6   A0A158NFS9   A0A195E7I2   A0A195F2K4   A0A195B2N8   A0A3L8DRA8   A0A067QWQ7   K7IWF0   A0A2P8ZDK8   A0A1Y1KLP2   A0A1B6C9V7   A0A2J7R8L6   B0WBL5   A0A1S4JCH8   A0A1Q3FG21   A0A1Q3FHJ1   A0A1W4XM12   A0A1Q3FHU5   A0A310SW51   R4WCW2   U5EPD9   A0A194R0C2   Q5BU46   A0A1S4F115   A0A1B6ENT1   Q17IU7   A0A1B6LXF5   A0A1L8E208   A0A0K8TMV9   A0A182GMW3   A0A023EMP5   A0A023EMP3   D2A2M0   A0A182F205   E0VPY2   W5JC86   A0A1B1PFX7   A0A2M3Z3J1   A0A2M4AAB8   A0A1B6MBH9   A0A182J856   W5J8C7   A0A336KJI6   A0A084VL73   A0A0N7Z9C0   A0A2M4BVP6   A0A0V0G566   A0A1B0CWM8   A0A182W6W3   J3JYW2   A0A182MDU3   A0A182RCN3   N6TDR6   A0A182UX12   A0A182TXB8   A0A182PPQ3   Q7Q442   A0A182HUH0   A0A182XKY4   A0A182L178   A0A182QPK3   A0A182K6Z2   A0A182SI37   A0A182NFC2   N6U9Y0   A0A1I8NLV0   A0A1L8EI01   A0A1A9WBA8   A0A0A9VZC7   A0A0L0CM01   A0A0A9YJN3   A0A146LIT1   T1PFH7   A0A0K8U0B7   N6TSK5   A0A1B0A7J4   W8BRW2   A0A1A9UY73   A0A1A9YIP1   A0A1B0BB20  

PDB

5ISO     E-value=1.29469e-67,     Score=649

KEGG

100126177    K07199 5'-AMP-activated protein kinase, regulatory beta subunit | (RefSeq) AMP-activated protein kin

PATHWAY

04068    FoxO signaling pathway - Bombyx mori (domestic silkworm)
04213    Longevity regulating pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0016301   GO:0050790   GO:0005829   GO:0042147   GO:0005634   GO:0006468   GO:0005737   GO:0019901   GO:0031588   GO:0005515   GO:0015074   GO:0020037   GO:0006520   GO:0006508   GO:0008237   GO:0043401   GO:0003707   GO:0051537  

PANTHER

PTHR10343:SF83   PTHR13297  

Length:

282

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.06322

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04127

outside

1  -  282

 

 

Pi

0.703595

Theta

7.562281

Tajima's D

-2.572307

CLR

963.375758

CSRT

4.99975001249937e-05

Interpretation

Possibly Positive selection