SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07238
Annotation
PREDICTED:_uncharacterized_protein_LOC101735560_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.24
 

Sequence

CDS
ATGATTGCTTTAGCGACGGAAAACTCAATAATTCTTCAAAATTTGGACTTTGCCGCAAGCGGAAGCTACTCTTGTGAGGTATCACTTGACACCCCTATATACACTAAAGCGTCCAGTGGAAAACAACTCACTGTTTTTCATCCACAGAAGCATCACCCACGTATCGACTTCCCGACTCGCTACCTAAGTTCAGGGGAGACGTTACGAGCTAACTGTACAACAGCCCCCGCCCTCCCAGCGCCCCATATAACCTGGTTCATCAATGGGAAGAAGATGGACGGAATTGTCGCCCATTCTCACAAGTTTCGGGTACCAATGGGCGAACGCAGCGGCCGTCGCGGGTTACAACGAACTTTTGAATCAAACAGTACACCACCTCCATTAGTAGCTCTAACGCATGCTTCACATATCGCCACCCGCCCTCCCGGCTGCAATCACAAGGATAACCCTGTTGACGAGATTGGCGAAATAAAAGAACGAGACGAAACAAACATGCTCCACTCGACATCCAGCAGGCACAAAATTCGAAAGCCCTCGCGACGAGATTTATATGTGACCATATCGGAACTGCAATTAGTGGCAACGGGAAGGCTTGAAATTACATGCGTCAGTACTATACCTGAATTCCGCAGCATCGATGATAAGTTCGCAGACGTCCGAAATGACACTGTTATTGTATTAGATAACCCATTTATTGAGGAAGGCTATAATATAACATCACGGTAA
Protein
MIALATENSIILQNLDFAASGSYSCEVSLDTPIYTKASSGKQLTVFHPQKHHPRIDFPTRYLSSGETLRANCTTAPALPAPHITWFINGKKMDGIVAHSHKFRVPMGERSGRRGLQRTFESNSTPPPLVALTHASHIATRPPGCNHKDNPVDEIGEIKERDETNMLHSTSSRHKIRKPSRRDLYVTISELQLVATGRLEITCVSTIPEFRSIDDKFADVRNDTVIVLDNPFIEEGYNITSR

Summary

Similarity
Belongs to the peptidase S1 family.
Pfam
PF00089   Trypsin        + More
PF07686   V-set
PF01365   RYDR_ITPR
PF08205   C2-set_2
Interpro
IPR036179   Ig-like_dom_sf        + More
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR009003   Peptidase_S1_PA       
IPR001314   Peptidase_S1A       
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR033116   TRYPSIN_SER       
IPR007110   Ig-like_dom       
IPR013106   Ig_V-set       
IPR000699   RIH_dom       
IPR013162   CD80_C2-set       
SUPFAM
SSF48726   SSF48726        + More
SSF50494   SSF50494       
Gene 3D
PDB
1DR9     E-value=0.0320645,     Score=84

Ontologies

Topology

Length:
241
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00569
Exp number, first 60 AAs:
0.00063
Total prob of N-in:
0.04869
outside
1  -  241
 
 

Population Genetic Test Statistics

Pi
2.51672
Theta
6.311889
Tajima's D
-1.834172
CLR
19.335183
CSRT
0.0216489175541223
Interpretation
Uncertain
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