Gene

KWMTBOMO07235

Pre Gene Modal

BGIBMGA010367

Annotation

PREDICTED:_glutamate_receptor-like_[Bombyx_mori]

Location

Bomo_Chr12(-):8787756-8790449      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.288

CDS

ATGGTTGGAAGTCTGCAGCGTCACGAGGCTGATGTCGGCGGTTCGCCTATATTTTTTAAAACCGACAGAGCTTACGTTGTTGACTATGTTGCTGAAACTTGGCCGTCAAAACAGAGCTTCATTTTTCGTCACCCAAAGCATCCGACCGGTGTTCATACTGTTTATTCCAGACCACTAAGTAACTCAGTTTGGTATTGTGTAATAGCGTTTTTATTTGTAACTGCTTCGACAGTTTTCTTTATGCTTAAATTTAACATCGACGAGATAGAACGCGCCGAAACATCTCAAAGTCTTGCATTTTTATTTGCTTGGAGCGCGATCTGTCAACAAGGTATGTCACTCAGACGTAATTCTTTGGCACTAAAAGTTGTCGTTTTCGTTACTTTCGTGTGCTCCATAACATTGTATCAGTACTATAATGCAACTGTAGTTTCAACATTGCTCAAGGAATCTCCGATAACTATACGGACTTTGAAGGATTTACTGCAGAGCGATTTGAAAGTAGGAGTCGAAGATGTCGCCTACGTTAAAGATTATTTTGCGCACACAAAAGATCCGATTGCTATTACAATGTATGAGAAGAAGATCGTCACAGGTAACAATCGTAACTTCTTTGACCCGGAGTACGGCATGTCTTTGGTGAAAAAAGGAGGCTATGCTTTCCACGTGGACACAGTTTATTCATACGGTATCATGAAGAAAACATTCACCGAGAGGGAGATATGTGAGATTCACGACGTAACTATGTATCCACCTCAAAAAATGGGTGCTGTATTGAAAAAAAATTCTCCGTACCGGAATTATTTTGCAATCGGGTAA

Protein

MVGSLQRHEADVGGSPIFFKTDRAYVVDYVAETWPSKQSFIFRHPKHPTGVHTVYSRPLSNSVWYCVIAFLFVTASTVFFMLKFNIDEIERAETSQSLAFLFAWSAICQQGMSLRRNSLALKVVVFVTFVCSITLYQYYNATVVSTLLKESPITIRTLKDLLQSDLKVGVEDVAYVKDYFAHTKDPIAITMYEKKIVTGNNRNFFDPEYGMSLVKKGGYAFHVDTVYSYGIMKKTFTEREICEIHDVTMYPPQKMGAVLKKNSPYRNYFAIG

Uniprot

H9JLG6   A0A3G6V6N1   A0A0F7QED3   A0A1P8SKB1   A0A2K8GL88   A0A212EZI3   + More
A0A3S2LPX5   A0A140G9G6   A0A2D0WKS8   A0A2H1X049   A0A345BF37   A0A2A4JDU9   A0A0V0J232   A0A2D0WKU3   A0A223HCY1   A0A194QF75   A0A194QX57   A0A3Q8HDQ6   A0A223HDB3   D6WR41   D6WR40   A0A139WES1   A0A1A9Y0Y4   A0A2U9NJC0   A0A1I8NZJ5   A0A310S3I7   Q16RP9   A0A1J0KKT8   A0A1B0CCX3   A0A182N213   A0A336LSS8   A0A1W6L167   A0A1Y1JSF2   A0A1S5VFS9   A0A182YKQ2   A0A0L7KZN2   B0W956   A0A0H4K7N6   A0A1J0KKK9   A0A1B3B7C4   A0A182N505   A0A0S3J2Z8   A0A084WCW9   A0A1A9ZUB6   A0A1B0G3C4   K7JKH3   A0A1A9WA95   A0A1A9UGA9   A0A1I8NZ03   A0A067QZN3   A0A1A9W1D6   Q178H7   A0A1S4FBU2   Q29DK2   A0A1B0B6Z6   Q7PYA3   B4N4S7   A0A348AZY8   B4IFX6   A0A182GL17   A0A3B0JUW8   N6ST25   A0A2P8XPT4   A0A1I8P071   B4QQA6   Q9VVU7   B3NDV5   B3M850   A0A1W4UP40   A0A1A9ZRL9   A0A223HCX7   B4PH18   U4UEG7   A0A1A9VIN8   B0X387   A0A182P5M8   Q7Q771   A0A0H4KP08   A0A310SDV6   A0A182NM91   A0A182KER7   A0A1I8N129   B0W957   U4UF86   A0A1S4J9H4   F5HLW5   A0A182Y0V0   A0A182WK86   A0A0G2UMS0   A0A2A4IYY8   N6U3W0   A0A182UMD8   A0A182VQS8   A0A182K342   A0A182TLZ3   A0A182RN63   A0A1W6L166   A0A1S5VFU7  

Pubmed

19121390    30465940    25803580    29375398    22118469    27004525    + More
29727827    27006164    28150741    26354079    18362917    19820115    17510324    27836740    28004739    28187311    25244985    26227816    26078716    27171401    26626891    24438588    20075255    24845553    15632085    17994087    12364791    14747013    17210077    30026095    26483478    23537049    29403074    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    25315136   

EMBL

BABH01005806    MH193964    AZB49410.1    LC017787    BAR64801.1    KX252770    + More
APY22699.1    KY225539    ARO70551.1    AGBW02011289    OWR46892.1    RSAL01000034    RVE51397.1    KU702618    AMM70645.1    KY019177    ARB05666.1    ODYU01012423    SOQ58719.1    MG820690    AXF48861.1    NWSH01001952    PCG69582.1    GDKB01000023    JAP38473.1    KY019181    ARB05670.1    KY283572    AST36232.1    KQ459053    KPJ04064.1    KQ461073    KPJ09545.1    MF625623    AXY83450.1    KY283702    AST36361.1    KQ971354    EFA06013.2    EFA07015.1    KYB26412.1    MF385089    AWT23261.1    GGOB01000043    MCH29439.1    CH477700    EAT37087.1    KX298833    APC94350.1    AJWK01007165    AJWK01007166    UFQT01000164    SSX21044.1    KX609445    ARN17852.1    GEZM01102247    JAV51933.1    KY445568    AQN78503.1    JTDY01004054    KOB68662.1    DS231862    EDS39753.1    KM979276    AKO90024.1    KX290688    APC94259.1    KU291857    AOE48107.1    KT381535    ALR72541.1    ATLV01022895    ATLV01022896    KE525337    KFB48063.1    CCAG010013760    AAZX01001008    KK852854    KDR14986.1    CH477363    EAT42606.1    CH379070    EAL30412.2    JXJN01009327    AAAB01008987    EAA01475.5    CH964095    EDW79151.2    FX985979    BBD43514.1    CH480834    EDW46563.1    JXUM01071488    KQ562666    KXJ75363.1    OUUW01000002    SPP76531.1    APGK01057891    KB741282    ENN70849.1    PYGN01001567    PSN33995.1    CM000363    CM002912    EDX11012.1    KMZ00469.1    AE014296    AAF49210.2    CH954178    EDV52309.2    CH902618    EDV40989.2    KY283576    AST36236.1    CM000159    EDW95388.2    KB632052    ERL88320.1    DS232311    EDS39589.1    AAAB01008960    EAA11187.5    KM979272    AKO90020.1    GGOB01000048    MCH29444.1    EDS39754.1    KB632161    ERL89256.1    EGK97276.1    KP743671    AKI28987.1    NWSH01004502    PCG65035.1    APGK01043551    APGK01043552    APGK01043553    KB741015    ENN75306.1    KX609444    KB465935    ARN17851.1    RLZ02208.1    KY445567    AQN78502.1   

Proteomes

UP000005204    UP000007151    UP000283053    UP000218220    UP000053268    UP000053240    + More
UP000007266    UP000092443    UP000095300    UP000008820    UP000092461    UP000075884    UP000076408    UP000037510    UP000002320    UP000030765    UP000092445    UP000092444    UP000002358    UP000091820    UP000078200    UP000027135    UP000001819    UP000092460    UP000007062    UP000007798    UP000001292    UP000069940    UP000249989    UP000268350    UP000019118    UP000245037    UP000000304    UP000000803    UP000008711    UP000007801    UP000192221    UP000002282    UP000030742    UP000075885    UP000075881    UP000095301    UP000075920    UP000075903    UP000075902    UP000075900   

PRIDE

H9JLG6    Q9VVU7   

Pfam

PF00060   Lig_chan        + More
PF00497   SBP_bac_3
PF10613   Lig_chan-Glu_bd
PF05147   LANC_like

Interpro

IPR001638   Solute-binding_3/MltF_N        + More
IPR001320   Iontro_rcpt       
IPR019594   Glu/Gly-bd       
IPR012341   6hp_glycosidase-like_sf       
IPR020464   LanC-like_prot_euk       
IPR007822   LANC-like       

Gene 3D

1.50.10.10    

CDD

cd04794  euk_LANCL

ProteinModelPortal

H9JLG6   A0A3G6V6N1   A0A0F7QED3   A0A1P8SKB1   A0A2K8GL88   A0A212EZI3   + More
A0A3S2LPX5   A0A140G9G6   A0A2D0WKS8   A0A2H1X049   A0A345BF37   A0A2A4JDU9   A0A0V0J232   A0A2D0WKU3   A0A223HCY1   A0A194QF75   A0A194QX57   A0A3Q8HDQ6   A0A223HDB3   D6WR41   D6WR40   A0A139WES1   A0A1A9Y0Y4   A0A2U9NJC0   A0A1I8NZJ5   A0A310S3I7   Q16RP9   A0A1J0KKT8   A0A1B0CCX3   A0A182N213   A0A336LSS8   A0A1W6L167   A0A1Y1JSF2   A0A1S5VFS9   A0A182YKQ2   A0A0L7KZN2   B0W956   A0A0H4K7N6   A0A1J0KKK9   A0A1B3B7C4   A0A182N505   A0A0S3J2Z8   A0A084WCW9   A0A1A9ZUB6   A0A1B0G3C4   K7JKH3   A0A1A9WA95   A0A1A9UGA9   A0A1I8NZ03   A0A067QZN3   A0A1A9W1D6   Q178H7   A0A1S4FBU2   Q29DK2   A0A1B0B6Z6   Q7PYA3   B4N4S7   A0A348AZY8   B4IFX6   A0A182GL17   A0A3B0JUW8   N6ST25   A0A2P8XPT4   A0A1I8P071   B4QQA6   Q9VVU7   B3NDV5   B3M850   A0A1W4UP40   A0A1A9ZRL9   A0A223HCX7   B4PH18   U4UEG7   A0A1A9VIN8   B0X387   A0A182P5M8   Q7Q771   A0A0H4KP08   A0A310SDV6   A0A182NM91   A0A182KER7   A0A1I8N129   B0W957   U4UF86   A0A1S4J9H4   F5HLW5   A0A182Y0V0   A0A182WK86   A0A0G2UMS0   A0A2A4IYY8   N6U3W0   A0A182UMD8   A0A182VQS8   A0A182K342   A0A182TLZ3   A0A182RN63   A0A1W6L166   A0A1S5VFU7  

PDB

4UQK     E-value=1.82275e-08,     Score=139

KEGG

101747081    K05313 glutamate receptor, ionotropic, invertebrate | (RefSeq) glutamate receptor-like

GO

GO:0016021   GO:0004970   GO:0003824   GO:0032281   GO:0004971   GO:0005886   GO:0050907   GO:0015276   GO:0016020   GO:0004046   GO:0005737   GO:0006520   GO:0006508   GO:0008237   GO:0043401   GO:0003707   GO:0051537  

Length:

272

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

44.31766

Exp number, first 60 AAs:

0.37856

Total prob of N-in:

0.19386

outside

1  -  59

TMhelix

60  -  82

inside

83  -  118

TMhelix

119  -  141

outside

142  -  272

 

 

Pi

26.162337

Theta

21.670521

Tajima's D

0.447316

CLR

0.359206

CSRT

0.510174491275436

Interpretation

Uncertain