SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07233
Annotation
PREDICTED:_lipase_member_H-B-like_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 1.805
 

Sequence

CDS
ATGAACGCAGGTGTCTTCGCCTTCTTCTTTATCCTCGTCGGGAGCGGTCAATGGCAATTAATGTCATGTCATCGAGTACACTCGTCGGATTACTTCGATCCAAGCGCCTACATCGAAGATTGGACATTAGACAATGAAAATGAAACACTTCATTTGCCTTCGTCATACCTCCACAGCTTCGGATATAATCACTCGTGGAATGGTTACAGTAGCAATGAAGATGGCGCAAAATTGCGTTATTATTTCGGTTCAAGGAGCGATTATAAGGAATGGCCCTTGTCAGAAGCTCATAAAATTTTTTCATACAGTTGGTACGATCCCAGTAAGCCAACCGTGATTTTCACTCACGGTTTCACAGGTTTTCCCGAAGGTTTAGCGGTAGTTTCGGTAGTCGGTTTCTTCATAGAAGAAGGCAAGAGTAATGTGATACTTTTGAATTGGCAACATCTCGCTGCCCACGTGTATCCCAGCTTCGTGAATTCATACTTGAATTGGGCCGCACCAAACGCAATAAAGGTTGGAGCGGAGTTTGCGGAAACTCTGTTGAACTTGTCAAAGACGGGACTAGATTTGGGAAAGACCCACTTAGTTGGACATTCTCTTGGAGCGCATATCTTCGGGATTGCTGGCAATAGGATTTCGGAGAGAGGGGTGCAGTTACCTTGGATTACAGGATTGGATCCATCCAGTGCAGTGTTTGATATGAAACCTGCTCATATGAAACTGAACCCAAACTCTGCGCGGTACGTGTCAGTAGTACATTCTGATCCGAAAACCGTGGGCCAGTTTTACAACCTGGATGCCCAGCCGGTCGGTATGCTAGATTCTCCAGTGAAGATTTATGCAGTCACCATCGATGTTGGCAACTCCTAA
Protein
MNAGVFAFFFILVGSGQWQLMSCHRVHSSDYFDPSAYIEDWTLDNENETLHLPSSYLHSFGYNHSWNGYSSNEDGAKLRYYFGSRSDYKEWPLSEAHKIFSYSWYDPSKPTVIFTHGFTGFPEGLAVVSVVGFFIEEGKSNVILLNWQHLAAHVYPSFVNSYLNWAAPNAIKVGAEFAETLLNLSKTGLDLGKTHLVGHSLGAHIFGIAGNRISERGVQLPWITGLDPSSAVFDMKPAHMKLNPNSARYVSVVHSDPKTVGQFYNLDAQPVGMLDSPVKIYAVTIDVGNS

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
Pfam
PF00151   Lipase
Interpro
IPR013818   Lipase/vitellogenin        + More
IPR029058   AB_hydrolase       
IPR000734   TAG_lipase       
IPR033906   Lipase_N       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
2PPL     E-value=1.95241e-13,     Score=182

Ontologies

Topology

Subcellular location
Secreted  
SignalP
Position:   1 - 23,         Likelihood:  0.878701
 
 
Length:
290
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
4.91295999999998
Exp number, first 60 AAs:
2.41434
Total prob of N-in:
0.12754
outside
1  -  290
 
 

Population Genetic Test Statistics

Pi
5.038703
Theta
14.693419
Tajima's D
-1.137753
CLR
1.421775
CSRT
0.109694515274236
Interpretation
Uncertain
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