The Silkworm Genome Information Database

Gene

KWMTBOMO07225

Annotation

PREDICTED:_protein_abrupt-like_[Bombyx_mori]

Location

Bomo_Chr12(-):8599188-8603125 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.93

CDS

ATGCAATACGGCATAAGTTGGAGTCTCCATAAAAGCGATTTAAGCAGCGGTCTTGCACAGCTACAGTTGAATGAAGAATTCGTTGATATGACACTTGCAGCTGAAGGCCATTTAGTTAAAGTTCATAAAAATATAGTGGCACTTGCTAGTCCATATATTAAGGAAATGATGAAGGCAATTCCATCCCCTCACCCAATTATATTCTTAAATAATGTTAGTCATCAAGTATTGAAATACCTATTGGAATACATTTACACAGGAGAAGTACAAGTGCCAAATAATGTGATTAATTCTTTCATTGAAACGGCAAAATCTCTTTGTATAAAAGGAGTTGAACAAATTTGGACTCCAGAAGTAAATAATGATTACAACAAACAAAATGATTGTAGTGAGATATTCAGAGACCCAGTGGAATCGTCAGTTCAGAACGATATTCCATCTGGTACCTTAGAAATACAGAAGCTAGAAAGTAATGTTGCAGCCCAGATAAGAATCAGTGATAGAAATGTTTTTGAAATAATCCCAGTAACACAAAGTAATGAATTAAGATCAATAACTTCAAACAATATGCAAGCTGACAAAGATTTCAATGCATTTAGCAATAATGAAAATATTAATGAAGAAATTGCTGAATTTGATCTAATTAATATTAGCCAATCAAATTGTGAAAATCCAGTGGATTCACTTAAACAACCAATTAATGAAAGTTTTACGCCTAGCATATGTATAACTTATAATAATGATGGCAACAACCAACCAACTACAGCTGATATTAGTATTTCTGAAATAGTACAGTCAGAGAGAAAGTCATATAGTCCCATAACTGATATATTAAAAGAAAATATCAAGGATATTATCAAAGCGAGAGCTTTAACACCACTCTACACAATATCAAATAGAGGGTCACTCCAGTTGATGTTGAACCGATACATGTATTGTTGTCACCACCAATCATTCAAAGGTAGAAAGCGGCGATGGCGATGTGTGGATTATCGGACAAAACACTGCAAAGCACTAGTGGACACTGAAGATGAAACTATTACAAGAAGGTCAGGCTGCCATAATCATTCATACCATGACAGTAAAATTGTAAAAAAATATAAAAAATGTTATGTTTACACTAAGATAAAAGACGCTGAAGATTCCTGTCTCAAGCATGTAAAAAACTGA

Protein

MQYGISWSLHKSDLSSGLAQLQLNEEFVDMTLAAEGHLVKVHKNIVALASPYIKEMMKAIPSPHPIIFLNNVSHQVLKYLLEYIYTGEVQVPNNVINSFIETAKSLCIKGVEQIWTPEVNNDYNKQNDCSEIFRDPVESSVQNDIPSGTLEIQKLESNVAAQIRISDRNVFEIIPVTQSNELRSITSNNMQADKDFNAFSNNENINEEIAEFDLINISQSNCENPVDSLKQPINESFTPSICITYNNDGNNQPTTADISISEIVQSERKSYSPITDILKENIKDIIKARALTPLYTISNRGSLQLMLNRYMYCCHHQSFKGRKRRWRCVDYRTKHCKALVDTEDETITRRSGCHNHSYHDSKIVKKYKKCYVYTKIKDAEDSCLKHVKN

Uniprot

A0A2A4KA62 A0A2H1VZ89 A0A1Y1K4D4

Pubmed

28004739

EMBL

NWSH01000030 PCG80542.1 ODYU01005376 SOQ46155.1 GEZM01095826 JAV55318.1 + More

Proteomes

UP000218220

Pfam

PF04500 FLYWCH + More
PF00651 BTB

Interpro

IPR007588   Znf_FLYWCH        + More
IPR011333   SKP1/BTB/POZ_sf
IPR000210   BTB/POZ_dom

SUPFAM

SSF54695 SSF54695

ProteinModelPortal

A0A2A4KA62 A0A2H1VZ89 A0A1Y1K4D4

PDB

3HVE E-value=6.61595e-06, Score=119

KEGG

101745624 no KO assigned | (RefSeq) protein abrupt-like

GO

GO:0005515 GO:0016787 GO:0004046 GO:0005737 GO:0006520 GO:0006508 GO:0008237 GO:0043401 GO:0003707 GO:0051537

Length:

389

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00265

Exp number, first 60 AAs:

0.00029

Total prob of N-in:

0.00623

outside

1 - 389

Pi

20.447082

Theta

19.649967

Tajima's D

0.016147

CLR

0.352815

CSRT

0.378181090945453

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics