Gene

KWMTBOMO07224

Pre Gene Modal

BGIBMGA010368

Annotation

Broad-complex_core_protein_isoforms_1/2/3/4/5_[Papilio_machaon]

Location

Bomo_Chr12(-):8589201-8595405      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.941

CDS

ATGGCACAAGCACAGTTTTCGTTAAGTTGGGATTCATATCAGTCAAGTATTTGCGATGGCTTTAGCACTTTGCAACAGAATGGTGAATTTGTCGATATGACTCTTGCTTCTGATGGACGTTTTGTAAAAGTTCATCAAGTGTTACTTGCATTAGCTAGTCCATATTTAAAAGACTTAATAGCTTCAGCACCTTGTCCACATCCTATTATATTTCTTAATAATGTATCCCACCACACATTATGTTTACTTCTAGAATACATATATACAGGAGAAGTAATTGTCGCAGGTGATTATCTACAACAGTTTATTGAAGCTGCTAAATCACTTCACATAAAAGGCTTACAAAATATTATTCCAAATGACTTCGAAAATAATGAAGAATTCTATCAGGAACATGATGCAGATGAAACTCCTGATAGAAAAGTTACAAAAGCCTCTTCACATTCAGAAACCATAGACAAAGTAACATTGCCCCATATAGAAATACCATCTTTAGCACAGAAAGTGCTTATAAAACACGAAGATTCCAATTTCAGTCCAATAAAGGTCAGCTCTGCAGGATCGTTAGTTGTTGGTATTAAAGACGACTTTGATGTCATGGATTATTCAGAAGCTCATAACACGGCTTTAAATCTTCAGTATACCGTTTCAATACGAGGGTGTTTGCAAATAATCCTTAATCGTTACATTTACAACTTGAACTCCTCCACGACCAAAAATGGCTTAAAGCGGTGGCGTTGTGTTAACTACAGAGACCAGAAGTGTAGAGCTTTCGTCGTAACCAAAGGAAACATTGTCATAAACAGGGCAAATCCGCACAATCACAGTTTCCACGACAAAAAAATTTTGGCTAAAATCGAAAAGAAAGCAGTGTTCTCGGCGATGGACGAAGTTGAGGAATACAAGGAACGTAAGAAATTAAACGAAGAAAAGAGTGAAGATTCCGAAACGACCGTCGAAACCGAACATGTTATGTTGTTAGAGGACGATGAGAAAATTAGTGACAGTTAA

Protein

MAQAQFSLSWDSYQSSICDGFSTLQQNGEFVDMTLASDGRFVKVHQVLLALASPYLKDLIASAPCPHPIIFLNNVSHHTLCLLLEYIYTGEVIVAGDYLQQFIEAAKSLHIKGLQNIIPNDFENNEEFYQEHDADETPDRKVTKASSHSETIDKVTLPHIEIPSLAQKVLIKHEDSNFSPIKVSSAGSLVVGIKDDFDVMDYSEAHNTALNLQYTVSIRGCLQIILNRYIYNLNSSTTKNGLKRWRCVNYRDQKCRAFVVTKGNIVINRANPHNHSFHDKKILAKIEKKAVFSAMDEVEEYKERKKLNEEKSEDSETTVETEHVMLLEDDEKISDS

Uniprot

A0A2A4K9T4   A0A2H1VZ89   A0A194R0D4   S4NN21   A0A212EHW9   J9QBN1   + More
A0A212EK14   A0A2H1VSC0   A0A2A4JH22   A0A2A4JI35   A0A0N1IEB4   A0A1E1W6C7   A0A2H1VAN7   A0A2A4JGG4   A0A2A4JG78   A0A212EHU3   A0A194PIC4   S4PLX9   H9J8Q6   A0A1Y1K4D4   A0A1Y1K1I3   A0A0T6B6S9   A0A1B6MSE9   D6X4R4   A0A1J1IEI2   A0A1B6GJ06   A0A2H1WEX0  

Pubmed

26354079    23622113    22118469    19121390    28004739    18362917    + More
19820115   

EMBL

NWSH01000030    PCG80543.1    ODYU01005376    SOQ46155.1    KQ460883    KPJ11162.1    + More
GAIX01014126    JAA78434.1    AGBW02014789    OWR41074.1    JN790614    AFD01656.1    AGBW02014349    OWR41829.1    ODYU01004162    SOQ43735.1    NWSH01001496    PCG71076.1    PCG71072.1    KQ460954    KPJ10251.1    GDQN01008516    JAT82538.1    ODYU01001544    SOQ37909.1    PCG71071.1    PCG71077.1    OWR41073.1    KQ459603    KPI92798.1    GAIX01003810    JAA88750.1    BABH01030375    GEZM01095826    JAV55318.1    GEZM01095825    JAV55319.1    LJIG01009440    KRT83076.1    GEBQ01011505    GEBQ01001168    JAT28472.1    JAT38809.1    KQ971380    EEZ97681.1    CVRI01000044    CRK96841.1    GECZ01007372    JAS62397.1    ODYU01008202    SOQ51601.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000005204    UP000007266    + More
UP000183832   

PRIDE

H9J8Q6   

Pfam

PF04500   FLYWCH        + More
PF00651   BTB
PF10523   BEN

Interpro

IPR007588   Znf_FLYWCH        + More
IPR011333   SKP1/BTB/POZ_sf       
IPR000210   BTB/POZ_dom       
IPR018379   BEN_domain       

SUPFAM

SSF54695   SSF54695       

ProteinModelPortal

A0A2A4K9T4   A0A2H1VZ89   A0A194R0D4   S4NN21   A0A212EHW9   J9QBN1   + More
A0A212EK14   A0A2H1VSC0   A0A2A4JH22   A0A2A4JI35   A0A0N1IEB4   A0A1E1W6C7   A0A2H1VAN7   A0A2A4JGG4   A0A2A4JG78   A0A212EHU3   A0A194PIC4   S4PLX9   H9J8Q6   A0A1Y1K4D4   A0A1Y1K1I3   A0A0T6B6S9   A0A1B6MSE9   D6X4R4   A0A1J1IEI2   A0A1B6GJ06   A0A2H1WEX0  

PDB

6N34     E-value=0.000337119,     Score=103

KEGG

101746807    K14677 aminoacylase [EC:3.5.1.14] | (RefSeq) aminoacylase-1-like

PATHWAY

00220    Arginine biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01210    2-Oxocarboxylic acid metabolism - Bombyx mori (domestic silkworm)
01230    Biosynthesis of amino acids - Bombyx mori (domestic silkworm)

GO

GO:0006357   GO:0005634   GO:0005515   GO:0016787   GO:0004046   GO:0005737   GO:0006520   GO:0006508   GO:0008237   GO:0043401   GO:0003707   GO:0051537  

Length:

336

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02972

Exp number, first 60 AAs:

0.00211

Total prob of N-in:

0.01056

outside

1  -  336

 

 

Pi

23.452989

Theta

17.472355

Tajima's D

0.737179

CLR

0.591115

CSRT

0.594020298985051

Interpretation

Uncertain