SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07214  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010574
Annotation
Bm8_interacting_protein_precursor_[Bombyx_mori]
Location
Bomo_Chr12(+):8366816-8380546      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.658
 

Sequence

CDS
ATGACTGTAATAAAATTTATTTTAGTTTTAATATTTATAGCTCCATCATATGGTAGAGTGCCTGATAAAGTTTATTGTTTAGATGAAACATGCAGCAAGCCACTTTCAAGAGCCAAAACTTTGATAACTTACTCAAGTGCGGATCCTGACCACATATCCTATCGTAATAATGCTGAAGCTCTGGTGTTTATGAAGTCAGCTGGAACAAACCCTGAGCTATGGTTTGCAAGTATTGAAGTGCCAACAGAGTCATTGATACCAAAAATTTCCTTTCAACCTGATAAAGTTAAACAACCCCATGAAGTGGTCGAGGGTACCACACTGTACACTACGGAAGCAACAGTCAAAGATATCAATACAGCACCACAACCTGCATCAAGTTTACCAAATGAAATTAATGAAAATTTAGGTACAATTAAACCAGTTGACAATATTAACCCAAAAAATGTTGATTTTGAAAACATTAGAGAAGTCAACAAAAGGCTCTTAGATACTCCTAATTTTCCTCAACAAAAAATACCAAATGTTCAAGAAGCACAAGAGAATATTCAGAAAAAAAATACAATTGAAACAAATGTTCGATTTGAAAATGTACCAAATCAACATTTAAATGTTCATAAGGATGTCAATGTTCATAATCCAGAAACAAAAGATCAGAACTACTATAAACAAGTAAATTTGAATGAAGCAGAATTACAGAAAACAAGTGAAACATTGACAACAGTTCCAATACAAAAATTCAATGAAGAGAATTTTCATGATCACAACATTTTGAATGAGAAGTCAGTTCAAAAAGGGCATGAGCAGCATGTTAATGATTTACCTATTATAGAAAATAGTAGTCCTAACGTTCACAATAAAGAAGTTTATAATGAGCCTCAAATTTCCATCTCTCAATCTTCATCAAGAAGTGGCAGTGAAGGAAATATCCCTAATACAGAAGGCATTATTCATCAAATGCTAAACGATGAAGTCCCAGAAAGTGAACAAAATGTTTCAGTGCCTTCAAACATGAATAGAAATGAAGATAGTGATAAACATGCAAAACAAGCAGTAGCAGATAGTACTGTAGAAAATACACAACAACAGAACAATGTGTATAATAATAATCAAAAAGGGCATGAGCAGCATGTTAATGATTTACCTATTATAGAAAATAGCAGTCCTAACATTCACAATAAAGAAGTTTATAATGAGCCTCAAATTTCCATCTCTCAATCTTCGTCAAGAAGTGGCAGTGAAGGAAATATCCCTAATACGGAAGGCACTATTCATCAAATGCTAAACGATGAAGTCCCAGAAAGTGAACAAAATGTTTCAGTGCCTTCAAACATGAATAGAAATGAAGATCGTGATAAACATGCAAAACAAGCAGTAGCAGATAGTACTGTAGAAAATACACAACAACAGAACAATCTATATAATAATATTCCAAATATAAATGGGGAACAAGTTCAAAAAAACCCAGAGCTCCCATTAGAGACAAACAGAGAACAAAATAATTTCTTAGACCAACAAAATCACCCAAACGAAAAATTAAATAAAAATCATTTTGAAAAAAGTACACCTTTTATGGAAAACCCTTCTAATATTTTATATGACAATACTCAAAGTGAAATAAATAGGCTGACAGAAACAATTAGTACTAAGACAGAGATAGAATCCGAACGAACTTTGCCCATTGTAAATAGATCACCCAATTCTGATAATGTTGTAAACTATGAAACAGGAATACCATCTACTCTTAGTGTAACAGAGAGAAATATCGAAATAAATAACCCCAATACAGGAATGCCTCCAATTGTTGAAAATCCTAACAACATAATTCCTAACATAAATTTGAAGGAAATACAATTGGAATCAAGGGAGGTACCCTCAGTAGATAGATCTCACAGTCCTGAATATGTCTTAAACAATCAAAACGAAAATATACGAACACCACCCCATCCAGCTGAAACACAAAGATATTTTGAAACAAATAATGCCATGACTGAAATACCTCCAGTTGTTGAAAATGTTAACAATATTGTTCATAATGCGAACTTAAAGGAACAACAACTGGAATCAATACCTCCCTATGTAGACAGAGCTCCCAATCAAGAAAATGTATTTGTTGATGTGGCAGAACAATTAAGAACACCACCTCCTCCATATTTGAATCCCATAACTGAGAATTATCAACAAGATCATTTTGAAAATCCCACTACAGAAACGTCACCACTTCTATTTAATCCATCCACATCTGCAATACCCGATATTTCCATAAATGAAGAGCAACCATTAACAACAGAATTAAATATACAAACAACAACTGAAGGTTCAAAAGAACCATTTTCAGGCATGGATGAGAACACAAACATTAATCAGGAATTGCAAAGTAACCAGGAAGTTGGTGATAAACACTCCTACTACACGGAAACTCCTGTAGATATTGAATATGGTAACACAGCAGAGTCAAATTTACCAACTAGTGATGAATACCAGGTATTTCCTGAAGAAACCACTAAAGGATGGTTTGCTTCCATTTTTGACACATTAGCTGGTATGTGGACCTCATCATCTGATGATCAAGACATTTCAGATAATACTGAAGATAGCATCTATGATGAACCAAAGACTGACAATGCTGAAGAATTTTCTTTTATAAAATACTTAATACATAGTTATTATTCAGTGATGGGAATAGATGAAGAAACTCGAGTACTCTTCACATCTGCAGGAGACGCCTGCTATACAGAAAACTACTGTGATGGGCAAAGTAACACAAATAAAAATCGATTGTTAACATTCCTCCTAACGACAGCCAGCTCTGTTCTTCTGTTCACATTGGGATATTATTACATCGACATAAGGAGACAGGATGGTAGGCTTATTGGAACAATCAATTCTTTGCAAAGAGATTTGTTATTTACTACTAAGGAGTGTGAGATTTTAAAAGAGGAGCTTTCGACTACTAAGACGAAATTAGCAGGGATTGAAGACAACTCATTTGGCATGGACGATATGGTGCAATCACTAAAAGAGGAAATCAATGAAATGAAAGCACAGAACGATAGGCTACGTCATTCTCTGGACGACAATGAAAAACTGTTGCGAGTATCCGAAAATACTGCCGAGGAGCTTCAGAACACTCTCAGCGAAGTGGAGAATACTCTCAGTGAGCTTTTGGCTGAAAGAGCTAACTTAGAGGAGCAAATTGCAGAAATCAATGGAAAAGCTCAAGCATTTGAAGAGGAATTGATCACAGTAAGTCGAGATCGAGATAACTTCCAACTAAAATATGTATCGGCTGAAACTACGTTAAAAGAATCAGAAAAACAGGTCAAAGAAATAGAACAATTGAACAAACAGTTATCAGAAACTAAAAACAAAAACGAACTACTGCAACACGAAATAGATGCTTTAAAGGATGCATTAAGGCAAATGAAACATGATCCCTCATCGAACGTCGATGTGGCTTCACTTATCGACCACGCTGAAATCAAAGCCCAACTATCCAAAGCTTTAGTAGAAAGAAATAATTTAGCCAACAAGTATGAGGTCGAACAAAAGGAACGGGTTCGTCTCGATCAAGAACTGAAAAAAACTCAAGAGTCATTACATGCGACGAACCAGCAGGCTACAGAAGCCGTCACTAGACTTGAAGTTCTAGGAAAGTATTTCCAAGATCGGGAGAGCGAACTACTCAAGGAATTGAGTACTAAGGAATCATTGTGGCTGAGTAAACAGGGAGAATCTGCTAGCACCGTTGAGAAAATTGAACTACTGCAGCAAGAACTACAGAGATTCAAAGAGAAGTGCGACACGCTGAGCCGCGAGCTGGCGGAGCAGGAGTCGCTGCGGCGCGCGGCGGTGGGGGAGGTGGAGGCGCGCGCGCACACGGCGTGGCTGGAGGCGCGCGCCGCCCGCCGCGACGCCGACGCCGCGCGGGACCTCGCCGCCGCGCTGCGCCGCAAGCTCGCCGCCACCGCGCACGATGGCGCCCTCTCGCCGCATCACAAAGTAGCGTCACCTCTGGAAATGAGCGAGAACCCGGTGTTGCTGCCGCCGCCGCTGCCGCCTTTGTCGTTCCTACCGCCGCCGCTGTTACCGCCCCTGCCGAGACCGCCTCCACTCGGCAGGCTACCCTCGCCTCTCCAACCTAGGTACGGGGATCGACGCTACTCGCCGGACTCGCGGTACTCGCCGCAGAGGCGGTACTCGCCCGAGAGCCGCTACTCGCCGGAGACGGTGCGGTACTCGCCCGACAGCCGCTACTCGCCGCCGCCTCGCCGGTCGCCCTACTCGCCCAGACCCAGCAGACGACGTTCCAGAGATAGATACGAAGGTAGTTGTGGATCAAGGTCTCGTAACGCGCCCGAAACAGAATCCGAATACCCTTCGGACAGTCCATCAAGGAGCACGCGGCGACGGAGCAGATACCAGAGGCATTCAGGTCCCAGCTCTGGCTCAGGTTGTTCCTCGGAATCTGATAAATAA
Protein
MTVIKFILVLIFIAPSYGRVPDKVYCLDETCSKPLSRAKTLITYSSADPDHISYRNNAEALVFMKSAGTNPELWFASIEVPTESLIPKISFQPDKVKQPHEVVEGTTLYTTEATVKDINTAPQPASSLPNEINENLGTIKPVDNINPKNVDFENIREVNKRLLDTPNFPQQKIPNVQEAQENIQKKNTIETNVRFENVPNQHLNVHKDVNVHNPETKDQNYYKQVNLNEAELQKTSETLTTVPIQKFNEENFHDHNILNEKSVQKGHEQHVNDLPIIENSSPNVHNKEVYNEPQISISQSSSRSGSEGNIPNTEGIIHQMLNDEVPESEQNVSVPSNMNRNEDSDKHAKQAVADSTVENTQQQNNVYNNNQKGHEQHVNDLPIIENSSPNIHNKEVYNEPQISISQSSSRSGSEGNIPNTEGTIHQMLNDEVPESEQNVSVPSNMNRNEDRDKHAKQAVADSTVENTQQQNNLYNNIPNINGEQVQKNPELPLETNREQNNFLDQQNHPNEKLNKNHFEKSTPFMENPSNILYDNTQSEINRLTETISTKTEIESERTLPIVNRSPNSDNVVNYETGIPSTLSVTERNIEINNPNTGMPPIVENPNNIIPNINLKEIQLESREVPSVDRSHSPEYVLNNQNENIRTPPHPAETQRYFETNNAMTEIPPVVENVNNIVHNANLKEQQLESIPPYVDRAPNQENVFVDVAEQLRTPPPPYLNPITENYQQDHFENPTTETSPLLFNPSTSAIPDISINEEQPLTTELNIQTTTEGSKEPFSGMDENTNINQELQSNQEVGDKHSYYTETPVDIEYGNTAESNLPTSDEYQVFPEETTKGWFASIFDTLAGMWTSSSDDQDISDNTEDSIYDEPKTDNAEEFSFIKYLIHSYYSVMGIDEETRVLFTSAGDACYTENYCDGQSNTNKNRLLTFLLTTASSVLLFTLGYYYIDIRRQDGRLIGTINSLQRDLLFTTKECEILKEELSTTKTKLAGIEDNSFGMDDMVQSLKEEINEMKAQNDRLRHSLDDNEKLLRVSENTAEELQNTLSEVENTLSELLAERANLEEQIAEINGKAQAFEEELITVSRDRDNFQLKYVSAETTLKESEKQVKEIEQLNKQLSETKNKNELLQHEIDALKDALRQMKHDPSSNVDVASLIDHAEIKAQLSKALVERNNLANKYEVEQKERVRLDQELKKTQESLHATNQQATEAVTRLEVLGKYFQDRESELLKELSTKESLWLSKQGESASTVEKIELLQQELQRFKEKCDTLSRELAEQESLRRAAVGEVEARAHTAWLEARAARRDADAARDLAAALRRKLAATAHDGALSPHHKVASPLEMSENPVLLPPPLPPLSFLPPPLLPPLPRPPPLGRLPSPLQPRYGDRRYSPDSRYSPQRRYSPESRYSPETVRYSPDSRYSPPPRRSPYSPRPSRRRSRDRYEGSCGSRSRNAPETESEYPSDSPSRSTRRRSRYQRHSGPSSGSGCSSESDK

Summary

Uniprot
D5MTP2  
Pubmed
22752911   
EMBL
AB559579    BAJ07613.1   
PRIDE
D5MTP2   
ProteinModelPortal
D5MTP2  
PDB
6FSA     E-value=1.86264e-06,     Score=129

Ontologies

KEGG
100463492    no KO assigned | (RefSeq) Ser; Bm8 interacting protein
GO

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.993341
 
 
Length:
1492
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.05476
Exp number, first 60 AAs:
0.10036
Total prob of N-in:
0.00609
outside
1  -  1492
 
 

Population Genetic Test Statistics

Pi
23.126904
Theta
20.15301
Tajima's D
-1.52293
CLR
142.827819
CSRT
0.0577471126443678
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 TIITYSSADPDHISYR 95.45 4e-08
26822097 DIIFTTK 95.45 5e-08
28556443 SAGTNPELWFASIEGK 100.00 1e-04
28556443 NAADIINR 100.00 0.003
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