Gene

KWMTBOMO07212

Pre Gene Modal

BGIBMGA010378

Annotation

PREDICTED:_uncharacterized_protein_LOC106132271_[Amyelois_transitella]

Location

Bomo_Chr12(-):8357652-8359535      View in EpiBrowser

Full name

Ciliogenesis-associated TTC17-interacting protein      

Location in the cell

Extracellular   Reliability : 1.347

CDS

ATGTCCAGTCTCAATGTTTGTCAGGGTGTTAGTCAAGCTGTTGTGAACGGGAAACCGCTTTTTGTTGTTAAAGTAGAACGACACATTATTGAACCTAATGGATATGTTCATCAGACCTTAACTGTTCTAACTTTAAGAGGCTATACAGTGAGTCACGAATGGGCTGACAATAATTGTATACTACACCTGAATCCACTTCTGCGTGTGGTGCCAGAGAGGGACGAGATCGAGCCTCACGCTCCTTTGCGTGAAAAGTGGCGAGAAGATCTTCAACTTTTATCTGATTACTTGGACTATAAGAGTGCACGGACTTCTGAAGGCGGCCGCTATATAGCTGAGAGTGGCTCGCTCACTAACACCATCCGGGAATATCTGCAAGCACTTCTATTACTTCGTCCCCAGGATGCTTTGCATTTCACGAGACATTACTTTGGTTCTGCTCTATCAGCCCTGGATCTTCCCCATGACGAATATTTCGATGCCGCTTCCAAGCACGTTAGGTATTACTTTTTTGAAGAGTAA

Protein

MSSLNVCQGVSQAVVNGKPLFVVKVERHIIEPNGYVHQTLTVLTLRGYTVSHEWADNNCILHLNPLLRVVPERDEIEPHAPLREKWREDLQLLSDYLDYKSARTSEGGRYIAESGSLTNTIREYLQALLLLRPQDALHFTRHYFGSALSALDLPHDEYFDAASKHVRYYFFEE

Description

Plays a role in primary ciliogenesis by modulating actin polymerization.

Similarity

Belongs to the CATIP family.

Keywords

Cell membrane   Cytoplasm   Cytoskeleton   Membrane   Nucleus  

Feature

chain  Ciliogenesis-associated TTC17-interacting protein

Uniprot

H9JLH7   A0A3S2LIT1   A0A2A4K9D2   A0A194R0E9   A0A212FAC1   A0A194PIB1   + More
A0A2H1V2X0   A0A1Y1LYA0   A0A1Y1M3H2   U4UYS0   A0A0L7RC64   A0A2A3E9A3   A0A088AMD0   A0A1W4XPR9   A0A3L8DUT2   A0A154P320   A0A026X0A7   A0A2P8XL75   A0A232EXG3   E0VIE2   Q0IHI3   A0A1L8EVS1   A0A1S3DNZ7   A0A3Q0JL89   M4AAF6   F7EC34   A0A3B4GK08   A0A3R7FLV2   A0A1S3HUC9  

Pubmed

19121390    26354079    22118469    28004739    23537049    30249741    + More
24508170    29403074    28648823    20566863    27762356    23542700    20431018   

EMBL

BABH01005765    RSAL01000003    RVE54761.1    NWSH01000030    PCG80534.1    KQ460883    + More
KPJ11177.1    AGBW02009504    OWR50670.1    KQ459603    KPI92783.1    ODYU01000219    SOQ34624.1    GEZM01045561    JAV77748.1    GEZM01045562    JAV77747.1    KB632429    ERL95475.1    KQ414615    KOC68582.1    KZ288340    PBC27769.1    QOIP01000004    RLU23669.1    KQ434796    KZC05744.1    KK107046    EZA61725.1    PYGN01001799    PSN32745.1    NNAY01001745    OXU23043.1    DS235199    EEB13148.1    BC123143    CM004482    OCT63430.1    AAMC01028405    NIRI01002457    RJW61452.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000007151    UP000053268    + More
UP000030742    UP000053825    UP000242457    UP000005203    UP000192223    UP000279307    UP000076502    UP000053097    UP000245037    UP000215335    UP000009046    UP000186698    UP000079169    UP000002852    UP000008143    UP000261460    UP000085678   

PRIDE

H9JLH7   

Pfam

PF10172   DDA1        + More
PF02197   RIIa

Interpro

IPR018276   DDA1_N        + More
IPR016024   ARM-type_fold       
IPR003117   cAMP_dep_PK_reg_su_I/II_a/b       

SUPFAM

SSF48371   SSF48371       

ProteinModelPortal

H9JLH7   A0A3S2LIT1   A0A2A4K9D2   A0A194R0E9   A0A212FAC1   A0A194PIB1   + More
A0A2H1V2X0   A0A1Y1LYA0   A0A1Y1M3H2   U4UYS0   A0A0L7RC64   A0A2A3E9A3   A0A088AMD0   A0A1W4XPR9   A0A3L8DUT2   A0A154P320   A0A026X0A7   A0A2P8XL75   A0A232EXG3   E0VIE2   Q0IHI3   A0A1L8EVS1   A0A1S3DNZ7   A0A3Q0JL89   M4AAF6   F7EC34   A0A3B4GK08   A0A3R7FLV2   A0A1S3HUC9  

KEGG

101744949    no KO assigned | (RefSeq) uncharacterized LOC101744949

GO

GO:0005886   GO:0015629   GO:0030041   GO:0044782   GO:0005737   GO:0005634   GO:0061371   GO:0060271  

Subcellular location

Nucleus  
Cytoplasm  
Cell membrane  
Cytoskeleton  

Length:

173

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00186

Exp number, first 60 AAs:

0.00136

Total prob of N-in:

0.09175

outside

1  -  173

 

 

Pi

352.34046

Theta

231.605493

Tajima's D

2.180777

CLR

0

CSRT

0.909454527273636

Interpretation

Uncertain