Gene

KWMTBOMO07205  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010381

Annotation

PREDICTED:_protein_sly1_homolog_[Papilio_polytes]

Location

Bomo_Chr12(-):7846579-7857276      View in EpiBrowser

Full name

Protein sly1 homolog      

Location in the cell

Nuclear   Reliability : 2.083

CDS

ATGTCTACGCTAAGAGAACGCCAACTTAATGCCTTGAAACAGATGCTTAATTTAAATCAGCCGCTTACAAAGAATATAGCCAATGAACCGACGTGGAAAATCTTAATATATGATAGAGTTGGACAAGATATTATCTCACCATTGGTATCTGTAAAAGATTTGCGTGAACTAGGAGTGACTCTTCATTTACAACTACATTCAGATCGAGATTCGATACCAGAAGTACCTGCTGTTTATTTCTGTTCTCCTTCTGATGAAAATCTGGATCGCATTTGCCAAGATCTCGATAATGGGATCTATGATCAATACCATTTAAACTTTATATCACCAATCACAAGACACAAACTTGAAGACTTAGCTGCATCAGCTATCCAGTCAAATTCTGCTGTCAATATACATAAAGTTTTCGATCAGTATTTGAACTTTATTTGTTTGGAAGATGATCTTTTTATAATGAAGCACCAGCAATCTGATTCATTGTCATATTATGCAATAAACAAAGCTGATACTAAGGACACTGAAATGGAAGTGATCATGGACAACATTGTTGAAAGCCTGTTCTCTGTGTTTGTGACAATGGGCAATGTACCTTTTATACGAAGTACTAAAGGTAATGCTGCTGAGATGGTTGCTAAAAAGCTTGATAAAAAATTGAGAGAAAATCTTTGGGATGCCCGAAACAATCTCTTCCATGGCAACACTGGACAAGGTGGTGCATTCAGTTTTACGAGACCCATGTTGATTCTACTGGATAGAAATATTGACATGGCAACACCTCTCCATCACACATGGACCTATCAAGCACTTGCACATGATGTATTGGATTTATCACTGAATAGAGCAGTTGTCCCAGAAAACACAAATGCTACAGTACCGATTCAGAAATCAAACACGAGGATATGTGACCTTGATTCGAAAGATCCATTATGGTCAGAGCACAAAGGTAGCCCCTTTCCAACTGTTGCTGAGGCTATACAAGAGGATTTAGATAAATACAGGAGTTCAGAAGCCGAAGTAAAGAAACTGAAGAGCTCTATGGGTCTCGATGCAGAAAGTGACTTGGCCCTGAGCATGGTCAGTGACAATACTCAACGGCTTACCAACGCGGTGAACTCATTACCTCAACTCATGGAAAAGAAACGGCTGATTGATATGCACACTACTATCGCCACAGCAATTCTTAATGCCATTAAGTCCAGAAGACTAGATTCATTTTTCGAATTAGAGGAAAAAATAATGAGTAAAAGCACCGCCGTGGAAACCAAAGCGGTTATGGATCTTATAACTGATCCCAGTGCGGGTACACCCGAGGACAAAATGAGGCTGTTCATTATTTACTATCTGTGCACGTCGCAATTCACTGACGATGAATATGAAAAGTTTGAAGGAGCTCTAGTGGCGGCCAACTGCGATGTCAAAGCCCTATCTTACATGAAACGGTGGAAGGGTTTCACAAAAATGTCAAATCAGTACGAAGGCGGCGGCACCAAAACAGTATCCATGTTCTCTAAACTTGTATCCCAAGGCTCATCCTTTGTAATGGAGGGCGTCAAAAATTTAGTTGTCAAAAAACACAAACTTCCCGTGAGCCGCATAGTGGAGAGCGCTCTGAGTGGCAGCGAGAGCGCCGCCGAGCTCACGTGGCTGGACCCCCGCGCGGCGCGCACGGACTCGGCCGGTCGCGCGCGCTCCGCACGACAACAGCCGCCCACCGACGCTGTGGTCTTCCTCGTCGGCGGCGGGAATTACATCGAATACCACAACCTGATCGACTTCGCTAAGCAACAAGCAGCAAATGGCATACCTAGAAAACTGATTTATGGTGCTACAACTTTGCCAAACGGGTCCCAATTTTTAAAACAGTTGTCGCTACTCGGAGAAGAGATTCAATGA

Protein

MSTLRERQLNALKQMLNLNQPLTKNIANEPTWKILIYDRVGQDIISPLVSVKDLRELGVTLHLQLHSDRDSIPEVPAVYFCSPSDENLDRICQDLDNGIYDQYHLNFISPITRHKLEDLAASAIQSNSAVNIHKVFDQYLNFICLEDDLFIMKHQQSDSLSYYAINKADTKDTEMEVIMDNIVESLFSVFVTMGNVPFIRSTKGNAAEMVAKKLDKKLRENLWDARNNLFHGNTGQGGAFSFTRPMLILLDRNIDMATPLHHTWTYQALAHDVLDLSLNRAVVPENTNATVPIQKSNTRICDLDSKDPLWSEHKGSPFPTVAEAIQEDLDKYRSSEAEVKKLKSSMGLDAESDLALSMVSDNTQRLTNAVNSLPQLMEKKRLIDMHTTIATAILNAIKSRRLDSFFELEEKIMSKSTAVETKAVMDLITDPSAGTPEDKMRLFIIYYLCTSQFTDDEYEKFEGALVAANCDVKALSYMKRWKGFTKMSNQYEGGGTKTVSMFSKLVSQGSSFVMEGVKNLVVKKHKLPVSRIVESALSGSESAAELTWLDPRAARTDSAGRARSARQQPPTDAVVFLVGGGNYIEYHNLIDFAKQQAANGIPRKLIYGATTLPNGSQFLKQLSLLGEEIQ

Description

Non-vital for development.

Similarity

Belongs to the STXBP/unc-18/SEC1 family.

Keywords

Complete proteome   Cytoplasm   Membrane   Reference proteome   Repeat  

Feature

chain  Protein sly1 homolog

Uniprot

H9JLI0   A0A2A4ISF0   A0A2H1W8W1   A0A194PIA6   I4DKD1   A0A1E1W415   + More
U5EM36   Q17JZ4   A0A1L8DVV5   A0A1Q3FAU3   D2A3F4   A0A1S4JCF2   A0A1W4X342   A0A2J7RNS8   A0A182KEL0   A0A1B6F8M0   A0A2M4ADP4   A0A2M4AD73   A0A2M3Z7R6   W5JW61   A0A2M4BGZ0   A0A182LH66   A0A182UTT0   A0A182HY28   A0A182WXF1   A0A182J7W9   B0WCI3   A0A182RVF9   A0A084VI10   U4UFV5   J3JWG1   A0A067RK32   A0A1B6CZ65   A0A2M4ADF9   A0A0A9Y8F8   A0A1J1IM12   N6TG38   A0A182LSU9   A0A182W1P6   A0A182FPL6   A0A224X933   A0A182N3A2   A0A182Y726   A0A1S4H6F8   A0A182P387   A0A0M4EE07   S4PAF6   T1PGS9   A0A0L0C8X1   A0A182R0D4   E2A440   A0A1W4UTS6   B5DJJ9   B4GSL4   A0A182U6U3   A0A1Y1NFQ2   A0A0P4VUA1   R4G4W4   B4KGU1   A0A336M193   B4LUE2   A0A3B0KA39   Q7QHU5   A0A1I8QD02   A0A0J9QUC5   B4NWQ5   B3NA17   Q24179   B4JAU2   B4I2L1   A0A336N046   E2BZI7   A0A0L7R233   A0A0J7P451   A0A1B0GMV8   B4MU03   B3N1Z5   A0A026W7W4   A0A0M8ZYC8   A0A151J9D2   A0A195CK26   A0A154PMR4   A0A0K8UIH7   A0A034VXV2   A0A088AVB0   F4WL32   A0A195B640   A0A158NZL2   O18637   E9IKW7   A0A195FC45   A0A151WLX0   A0A0A1XLL5   A0A1A9Y4F2   A0A1B0BGY7   A0A2A3ERD1   A0A232EJH6   A0A1A9V9F5   A0A310S9T6   A0A1A9ZN21  

Pubmed

19121390    26354079    22651552    17510324    18362917    19820115    + More
20920257    23761445    20966253    24438588    23537049    22516182    24845553    25401762    26823975    25244985    12364791    23622113    25315136    26108605    20798317    15632085    17994087    28004739    27129103    22936249    17550304    8675012    10731132    12537572    12537569    24508170    30249741    25348373    21719571    21347285    21282665    25830018    28648823   

EMBL

BABH01005710    BABH01005711    BABH01005712    NWSH01008358    PCG62589.1    ODYU01006772    + More
SOQ48924.1    KQ459603    KPI92778.1    AK401749    BAM18371.1    GDQN01009350    JAT81704.1    GANO01001166    JAB58705.1    CH477229    EAT47006.1    GFDF01003513    JAV10571.1    GFDL01010378    JAV24667.1    KQ971338    EFA01920.1    NEVH01002148    PNF42479.1    GECZ01023506    JAS46263.1    GGFK01005427    MBW38748.1    GGFK01005406    MBW38727.1    GGFM01003727    MBW24478.1    ADMH02000117    ETN67778.1    GGFJ01003184    MBW52325.1    APCN01004485    DS231888    EDS43554.1    ATLV01013254    KE524847    KFB37604.1    KB632278    ERL91253.1    BT127579    AEE62541.1    KK852424    KDR24206.1    GEDC01018538    JAS18760.1    GGFK01005492    MBW38813.1    GBHO01016221    GBRD01017639    GDHC01013782    JAG27383.1    JAG48188.1    JAQ04847.1    CVRI01000055    CRL01200.1    APGK01029087    KB740724    ENN79359.1    AXCM01007652    GFTR01007559    JAW08867.1    AAAB01008816    CP012523    ALC38230.1    GAIX01003284    JAA89276.1    KA647088    AFP61717.1    JRES01000753    KNC28726.1    AXCN02001120    GL436526    EFN71806.1    CH379061    EDY70471.1    CH479189    EDW25373.1    GEZM01009575    JAV94507.1    GDKW01000468    JAI56127.1    ACPB03020296    GAHY01000406    JAA77104.1    CH933807    EDW11141.1    UFQT01000238    SSX22217.1    CH940649    EDW64128.2    OUUW01000006    SPP81891.1    EAA05177.4    CM002910    KMY87683.1    CM000157    EDW87397.1    CH954177    EDV57480.1    U63852    AE014134    AY070995    BT022422    AAL48617.1    CH916368    EDW03900.1    CH480820    EDW54006.1    UFQS01002758    UFQT01002758    SSX14620.1    SSX34017.1    GL451627    EFN78885.1    KQ414666    KOC64935.1    LBMM01000153    KMR04714.1    AJVK01004227    AJVK01004228    AJVK01004229    CH963852    EDW75592.2    CH902667    EDV30605.1    KK107353    QOIP01000012    EZA52088.1    RLU16294.1    KQ435794    KOX73610.1    KQ979471    KYN21427.1    KQ977720    KYN00424.1    KQ434954    KZC12588.1    GDHF01025971    JAI26343.1    GAKP01011708    JAC47244.1    GL888207    EGI64995.1    KQ976587    KYM79725.1    ADTU01004724    U95037    GL764026    EFZ18853.1    KQ981685    KYN37983.1    KQ982944    KYQ48846.1    GBXI01014055    GBXI01002475    GBXI01002412    JAD00237.1    JAD11817.1    JAD11880.1    JXJN01014089    KZ288192    PBC34353.1    NNAY01004039    OXU18461.1    KQ766603    OAD53638.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000008820    UP000007266    UP000192223    + More
UP000235965    UP000075881    UP000000673    UP000075882    UP000075903    UP000075840    UP000076407    UP000075880    UP000002320    UP000075900    UP000030765    UP000030742    UP000027135    UP000183832    UP000019118    UP000075883    UP000075920    UP000069272    UP000075884    UP000076408    UP000075885    UP000092553    UP000095301    UP000037069    UP000075886    UP000000311    UP000192221    UP000001819    UP000008744    UP000075902    UP000015103    UP000009192    UP000008792    UP000268350    UP000007062    UP000095300    UP000002282    UP000008711    UP000000803    UP000001070    UP000001292    UP000008237    UP000053825    UP000036403    UP000092462    UP000007798    UP000007801    UP000053097    UP000279307    UP000053105    UP000078492    UP000078542    UP000076502    UP000005203    UP000007755    UP000078540    UP000005205    UP000078541    UP000075809    UP000092443    UP000092460    UP000242457    UP000215335    UP000078200    UP000092445   

PRIDE

H9JLI0    Q24179    O18637   

Pfam

PF00995   Sec1        + More
PF00005   ABC_tran
PF00339   Arrestin_N
PF02752   Arrestin_C

Interpro

IPR001619   Sec1-like        + More
IPR036045   Sec1-like_sf       
IPR027482   Sec-1-like_dom2       
IPR000412   ABC_2_transport       
IPR027417   P-loop_NTPase       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR003593   AAA+_ATPase       
IPR000698   Arrestin       
IPR011022   Arrestin_C-like       
IPR014756   Ig_E-set       
IPR014752   Arrestin_C       
IPR014753   Arrestin_N       
IPR011021   Arrestin-like_N       

SUPFAM

SSF56815   SSF56815        + More
SSF52540   SSF52540       
SSF81296   SSF81296       

Gene 3D

3.40.50.1910     2.60.40.640     2.60.40.840    

ProteinModelPortal

H9JLI0   A0A2A4ISF0   A0A2H1W8W1   A0A194PIA6   I4DKD1   A0A1E1W415   + More
U5EM36   Q17JZ4   A0A1L8DVV5   A0A1Q3FAU3   D2A3F4   A0A1S4JCF2   A0A1W4X342   A0A2J7RNS8   A0A182KEL0   A0A1B6F8M0   A0A2M4ADP4   A0A2M4AD73   A0A2M3Z7R6   W5JW61   A0A2M4BGZ0   A0A182LH66   A0A182UTT0   A0A182HY28   A0A182WXF1   A0A182J7W9   B0WCI3   A0A182RVF9   A0A084VI10   U4UFV5   J3JWG1   A0A067RK32   A0A1B6CZ65   A0A2M4ADF9   A0A0A9Y8F8   A0A1J1IM12   N6TG38   A0A182LSU9   A0A182W1P6   A0A182FPL6   A0A224X933   A0A182N3A2   A0A182Y726   A0A1S4H6F8   A0A182P387   A0A0M4EE07   S4PAF6   T1PGS9   A0A0L0C8X1   A0A182R0D4   E2A440   A0A1W4UTS6   B5DJJ9   B4GSL4   A0A182U6U3   A0A1Y1NFQ2   A0A0P4VUA1   R4G4W4   B4KGU1   A0A336M193   B4LUE2   A0A3B0KA39   Q7QHU5   A0A1I8QD02   A0A0J9QUC5   B4NWQ5   B3NA17   Q24179   B4JAU2   B4I2L1   A0A336N046   E2BZI7   A0A0L7R233   A0A0J7P451   A0A1B0GMV8   B4MU03   B3N1Z5   A0A026W7W4   A0A0M8ZYC8   A0A151J9D2   A0A195CK26   A0A154PMR4   A0A0K8UIH7   A0A034VXV2   A0A088AVB0   F4WL32   A0A195B640   A0A158NZL2   O18637   E9IKW7   A0A195FC45   A0A151WLX0   A0A0A1XLL5   A0A1A9Y4F2   A0A1B0BGY7   A0A2A3ERD1   A0A232EJH6   A0A1A9V9F5   A0A310S9T6   A0A1A9ZN21  

PDB

1MQS     E-value=4.30649e-84,     Score=795

KEGG

101744417    K19998 sec1 family domain-containing protein 1 | (RefSeq) protein sly1 homolog

GO

GO:0006904   GO:0016021   GO:0016887   GO:0055085   GO:0043190   GO:0005524   GO:0007165   GO:0000902   GO:0048190   GO:0006892   GO:0019905   GO:0009636   GO:0001666   GO:0000149   GO:0060628   GO:0005801   GO:0016192   GO:0044877   GO:0005798   GO:0006890   GO:0005886   GO:0005737   GO:0016020   GO:0006468   GO:0019843   GO:0005622   GO:0004656   GO:0005783   GO:0016702   GO:0016295   GO:0016296  

PANTHER

PTHR11679  

Subcellular location

Cytoplasm  
Membrane  

Length:

630

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15827

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00769

outside

1  -  630

 

 

Pi

143.997218

Theta

155.259654

Tajima's D

-0.407398

CLR

1.880139

CSRT

0.267336633168342

Interpretation

Uncertain