SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07201  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010382
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_disks_large_1_tumor_suppressor_protein_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.974
 

Sequence

CDS
ATGACAGAGAGAAGGAAGAAAAAGTCTCATAATGGATTTCTTCGGAAAGTCTCTTCACTATTTAATCTTGATACGGCTCACGTCGCATCATCTGAAATGAAGCAGTTACAGGTTAATGGCATAGAAGGTGGAGCAAATGAAAGAACACAGGGTGAGGATGGCTACATTTACCTCTCGGTGGCACTGTCTCGAGCTGGTGGTGCTGGCTTGGGCTTCAGCATTGCAGGAGGGTCTGACAATCCCCATGTGGCAGATGACCCTCATATCTATGTCACAAAGCTCATACCTGGTGGTGCTGCTGCAGCCAGTCAGTTACTGATTAATGATGCTATTTTACAGGTGAATGATGTGAATGTAGAAAATGTGACACATGCTGAAGCGGTTGATGCACTGAAAAAGGCTGGTAGTACTGTGAGATTGAAAGTGCGACGTCGAGCTATAGAAGATACCCTAAACGTGTCACAAGTGTCAAACAAAGAGGAATCTGTGGAAATAGAACTTATAAAAGGTGGCTCTGGCTTGGGCTTCAGTATAGCAGGCGGACTCGGTAACCAACACATACCCGGTGACAACGGCATTTACGTTACCAAAATCATGGCCGGCGGCGCTGCGCATCAAGATGGACGTTTAAGAGTTGGTGATAAATTGCTTATGGTCAAAAACACTTCTAACGGAGATGTCAATTTGGATAACGTGACACACGAGGATGCCGTGGCCGCTCTAAAGGCAACAGGAGAACGCGTGTTGCTAGTTTTGGTACCAGGGCCGAGACACGGACAACCCTCGCCGCGCACTTCTCGAGCTAACACACCGTCGAGCGCAGCAAATTCTCTCCGACGCGAAGACGCAACGGACGGCGGCGAGGAGGTACGCGTGGTGGAGCTGGAGAAAGGTCCCTCGGGCCTGGGGTTCAACATCGTCGGTGGCGAAGACGGGCACGGCATCTACGTTTCTTTCCTGTTGGCCGGCGGACCTGCGGAGAGGTCCGGCGCTCTACGGAGAGGAGACCGTCTGCTCGCAGTCAACGATCTTGACATATCGCACGCCACACACGAACAGGCCGCCAAAGCCCTGAAGAGCACGGGTCAAATTGTTAAATTGACTGTTGTGTATCGTCCACAAGAATACAATAAGTTTGAAGCACGAATCAATGAATTGAAACAACATCATACGCTATTACGGACATCTCAAAAACGATCCTTGTATGTAAGAGCATTATTTGACTACGACCCCATTCGAGACGATGGTCTACCTTCGAGAGGATTGCCGTTTCGATATGGCGATATATTGCATGTTACAAATGCGTCCGATGACGAATGGTGGCAAGCCAGAAGGCTGGGTCAGGATAAAGTGGACACCGATGCTATCGGTATAATTCCTTCGAAACGTCGATGGGAAAGAAAACAGCGGGCACGCGATCGACAAGTTAAATTCCAGGGACAGGGTACACCGGTCAGTACGAGCCAATCCACTCTGGAAAGGAAAAAGAAAACTTTATCTTTCAGTAGAAAATTCCCATTCATGAAGAGTCGAGAAGACGGCAAATCTGAAGATGGTTCCGATCAAGAACCTTTCATGCTTTGTTACACGCAGGAGGACGCTAACGCTGACGGTCAAGACGAGACGGTGTTGTCTTACGAAACAGTTCAGCAATTGACGATCGCGTACACTCGGCCCGTGATAATATTGGGCCCATTGAAAGATAGAATAAACGACGACCTCATTTCCGAGTTCCCTGACAAGTTTGGAAGCTGCGTGCCTCATACGACACGGCCAAGACGCGACTACGAGGTGGACGGGCGGGACTACCACTTCGTGGCCAGCCGCGAGCAGATGGAGCGCGACATACAGAATCACCTGTTCATCGAGGCCGGCCAGTACAACGACAATCTGTACGGAACGTCCGTGGCATCCGTGCGAGAAGTCGCCGAGAAGGGCAAGCATTGCATTTTGGACGTCAGCGGTAACGCAATCAAGAGATTGCAAGTAGCACAACTATTCCCTATTGCCATATTTATCAAACCAAAGAGTGTAGAGTCTATAATGGAAATGAACAAGAGAATGACAGAAGAACAAGCGAAGAAAACTTATGAACGTGCCCTTAAAATGGAGCAAGAATTCGCTGAATATTTTACTGGTTAG
Protein
MTERRKKKSHNGFLRKVSSLFNLDTAHVASSEMKQLQVNGIEGGANERTQGEDGYIYLSVALSRAGGAGLGFSIAGGSDNPHVADDPHIYVTKLIPGGAAAASQLLINDAILQVNDVNVENVTHAEAVDALKKAGSTVRLKVRRRAIEDTLNVSQVSNKEESVEIELIKGGSGLGFSIAGGLGNQHIPGDNGIYVTKIMAGGAAHQDGRLRVGDKLLMVKNTSNGDVNLDNVTHEDAVAALKATGERVLLVLVPGPRHGQPSPRTSRANTPSSAANSLRREDATDGGEEVRVVELEKGPSGLGFNIVGGEDGHGIYVSFLLAGGPAERSGALRRGDRLLAVNDLDISHATHEQAAKALKSTGQIVKLTVVYRPQEYNKFEARINELKQHHTLLRTSQKRSLYVRALFDYDPIRDDGLPSRGLPFRYGDILHVTNASDDEWWQARRLGQDKVDTDAIGIIPSKRRWERKQRARDRQVKFQGQGTPVSTSQSTLERKKKTLSFSRKFPFMKSREDGKSEDGSDQEPFMLCYTQEDANADGQDETVLSYETVQQLTIAYTRPVIILGPLKDRINDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHFVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEEQAKKTYERALKMEQEFAEYFTG

Summary

Similarity
Belongs to the MAGUK family.
EMBL
NWSH01000781    PCG74249.1    PCG74244.1    ODYU01006772    SOQ48926.1    PCG74248.1    + More
KP308212    ALH43430.1    PCG74246.1    PCG74243.1    KQ459603    KPI92776.1    AGBW02007871    OWR54462.1    KQ460883    KPJ11185.1    PCG74247.1    PCG74245.1    RSAL01000003    RVE54755.1    GEZM01029646    JAV86014.1    PCG74251.1    GEZM01029648    JAV86012.1    GALX01004353    JAB64113.1    AB630176    BAK23256.1    GBYB01013825    JAG83592.1    GALX01004354    JAB64112.1    GALX01004351    JAB64115.1    GEZM01029649    JAV86011.1    KQ434787    KZC05269.1    GDKW01003320    JAI53275.1    GECL01002151    JAP03973.1    GFTR01007839    JAW08587.1    GBGD01000633    JAC88256.1    GALX01004350    JAB64116.1    GEZM01029647    JAV86013.1    QOIP01000004    RLU23408.1    GDHC01010047    JAQ08582.1    KK107373    EZA51665.1    GEBQ01032251    JAT07726.1    GEBQ01020121    JAT19856.1    GEBQ01011690    JAT28287.1    JH431849    GFAC01005763    JAT93425.1    GFPF01007226    MAA18372.1    GEDV01005833    JAP82724.1    GFWV01009093    MAA33822.1    GEFM01002643    JAP73153.1    MG197667    AUG84417.1    GABZ01004227    JAA49298.1    GABZ01004165    JAA49360.1    KB099687    ELK38029.1    JP008686    AER97283.1    AEYP01017478    AEYP01017479    AEYP01017480    AEYP01017481    AEYP01017482    AEYP01017483    AEYP01017484    AEYP01017485    AEYP01017486    AEYP01017487    AAEX03017106    AANG04001815    KE163428    EPQ12035.1    EU375312    ABY81651.1    AFYH01019056    AFYH01019057    AFYH01019058    AFYH01019059    AFYH01019060    AFYH01019061    AFYH01019062    AFYH01019063    AFYH01019064    AFYH01019065    KB030403    ELK17610.1    AMGL01008844    AMGL01008845    AMGL01008846    AMGL01008847    AMGL01008848    AMGL01008849    JH881342    ELR54924.1   
Pfam
PF00625   Guanylate_kin        + More
PF00595   PDZ
PF00018   SH3_1
PF09058   L27_1
PF07653   SH3_2
PF10600   PDZ_assoc
PF10608   MAGUK_N_PEST
Interpro
IPR036034   PDZ_sf        + More
IPR020590   Guanylate_kinase_CS       
IPR001478   PDZ       
IPR027417   P-loop_NTPase       
IPR036028   SH3-like_dom_sf       
IPR008144   Guanylate_kin-like_dom       
IPR001452   SH3_domain       
IPR008145   GK/Ca_channel_bsu       
IPR036892   L27_dom_sf       
IPR016313   DLG1-like       
IPR004172   L27_dom       
IPR015143   L27_1       
IPR019583   PDZ_assoc       
IPR019590   DLG1_PEST_dom       
SUPFAM
SSF50044   SSF50044        + More
SSF50156   SSF50156       
SSF52540   SSF52540       
SSF101288   SSF101288       
PDB
2XKX     E-value=2.60552e-171,     Score=1548

Ontologies

Topology

Length:
713
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.51596000000001
Exp number, first 60 AAs:
0.70215
Total prob of N-in:
0.11580
outside
1  -  713
 
 

Population Genetic Test Statistics

Pi
193.633138
Theta
168.283075
Tajima's D
0.435109
CLR
0.020159
CSRT
0.496825158742063
Interpretation
Uncertain
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