Silkworm Genome Informatics Database

Gene

KWMTBOMO07197

Annotation

Zinc_finger_MYM-type_protein_1?_partial_[Stegodyphus_mimosarum]

Location

Bomo_Chr12(+):7763227-7764828 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.392 Nuclear Reliability : 1.543

CDS

ATGAAACGAGTAAAAGAAAGCGGTGCGTCATTTAGAAAGAAAAGAAAGAAAAGGGAGGAAATACAGATTAAAAACACTGGAGCACTACTCAAATACATCTCTCATAAGCCAACTTCTAGTTCTTTTAGTATTGTTGCCTCAAATACGGGTGAAGAAGCAGCGCTCGAAGGCGAAAAAACATTATCCAATGTTGTTCAAGAGGAAAGACCTGTTTCACACACTGGCGAAGAAGTAGAAAGTTTATCAAGTCCTAATGAAGAATCTGCTGCACAAATTATTCTGTCTGTTTCTATGAAAGATATTGGATTATGGCCTAACAAAATTGACGACAATACAAGAGTATTTCTGGTACATCAAGGTCCCTTTTTAATTCAAAATTTAGACGCCGACTTCGGCGAAGGAATAAAACGTTCTAATAATACAAGCAAAGCCAAAGGTGAAACAAGAAAACTGAGTCGGGACTGGTTTTTTCAAATTTTGCCTAATGGCGAAAAGCTCTTAAGATCGTATATTACCATCGAAGAAAAGTATTTATTGTTTCTGCTGCAAACTGTTTGA

Protein

MKRVKESGASFRKKRKKREEIQIKNTGALLKYISHKPTSSSFSIVASNTGEEAALEGEKTLSNVVQEERPVSHTGEEVESLSSPNEESAAQIILSVSMKDIGLWPNKIDDNTRVFLVHQGPFLIQNLDADFGEGIKRSNNTSKAKGETRKLSRDWFFQILPNGEKLLRSYITIEEKYLLFLLQTV

Uniprot

T1HSH5 T1H980 A0A2H1V0B8 A0A0L8HCR5 I3JRR7 A0A1A8L0A3 + More
A0A3P8P7S0 A0A3P8P3G9 I3KVY0 A0A0K2UAN6 A0A3P8NJ49 T2MBP3 A0A2W1BM15 A0A3Q1DI04 A0A0A1WI41 A0A3P8QWI9

Pubmed

25186727 24065732 28756777 25830018

EMBL

ACPB03000024 ACPB03000042 ODYU01000103 SOQ34303.1 KQ418495 KOF87093.1 + More
AERX01051688 HAEF01000685 SBR38067.1 AERX01072813 HACA01017774 CDW35135.1 HAAD01003421 CDG69653.1 KZ150087 PZC73750.1 GBXI01015745 JAC98546.1

Proteomes

UP000015103 UP000053454 UP000005207 UP000265100 UP000257160

Pfam

PF00379   Chitin_bind_4        + More
PF14291   DUF4371
PF05699   Dimer_Tnp_hAT

Interpro

IPR000618   Insect_cuticle        + More
IPR012337   RNaseH-like_sf
IPR008906   HATC_C_dom
IPR006580   Znf_TTF
IPR025398   DUF4371

SUPFAM

SSF53098 SSF53098

ProteinModelPortal

T1HSH5 T1H980 A0A2H1V0B8 A0A0L8HCR5 I3JRR7 A0A1A8L0A3 + More
A0A3P8P7S0 A0A3P8P3G9 I3KVY0 A0A0K2UAN6 A0A3P8NJ49 T2MBP3 A0A2W1BM15 A0A3Q1DI04 A0A0A1WI41 A0A3P8QWI9

KEGG

101746673 no KO assigned | (RefSeq) zinc finger MYM-type protein 5-like

GO

GO:0042302 GO:0046983

Length:

185

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00234

Exp number, first 60 AAs:

0.00126

Total prob of N-in:

0.22533

outside

1 - 185

Pi

367.21472

Theta

214.680997

Tajima's D

1.973965

CLR

0.414469

CSRT

0.88025598720064

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree