Gene

KWMTBOMO07195  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010569

Annotation

PREDICTED:_39S_ribosomal_protein_L46?_mitochondrial_[Amyelois_transitella]

Location

Bomo_Chr12(+):7672067-7675073      View in EpiBrowser

Full name

Exocyst complex component 7      

Alternative Name

Exocyst complex component Exo70

Location in the cell

Cytoplasmic   Reliability : 1.092 Extracellular   Reliability : 1.144 Nuclear   Reliability : 1.655

CDS

ATGTTGGTTAAGACATTGATGCGTATGAATATAACTTATTACCACAGGCTTTTAATAAGAAGTATTAGTAGCAAGCCAGCTTGGGATATATTGACGGGTATTTGCATTGAACGGTTACCAGTCGTAACTCCGCCGTTAACTGAAATGCAAAAAAAATATAAAGAATTTTTATTGACCGTAGAATTTGAGAAAAGCATGAAATCAAACCATGAAATTCAACACGAAAATGACAAAAAACAAGCTGAACTTTTCAAGGCTGAATCCCAAGATGTTGATATTGATGCTGTTAATAAAGTTACCGCCCAAGATTTTGAAGATGCAGCAAATGAAGAGTATTCAAAATTTAAATTTGGAAATTTAGAAACAGATGCAGACAAAAAAGGTGACAAAACATCAACAGAACGGTGCTTACAACGACATCTAGTTCTTGTGACACAACGGAAATTAGGAAATGATTCAAAGACATTACTTCCTCAGGGGCATTGGCAGGAGGGCGAGACACTACGTCAGACTGCTGAAAGAATAGTTAAGGAGCAAATCGGATCTGAACTTCAGATAAAATTTATTTCAAATGCTCCATGTGGATTCTACAAATATAAATATCCCAGTGAAATGAATGGAAAAGTTGGCGCCAAAATTTTTTTCTACTATGCAAACTACAAAAGTGGCAATCCTACAAAGTCTAAAGTGAATTGGTTAACACGTAAAGAACTCGATGAAATGTTACCACAGAAATATAGTAATGCAGTCAAAGAATTTTTAATTGAAGAAACTTATTAA

Protein

MLVKTLMRMNITYYHRLLIRSISSKPAWDILTGICIERLPVVTPPLTEMQKKYKEFLLTVEFEKSMKSNHEIQHENDKKQAELFKAESQDVDIDAVNKVTAQDFEDAANEEYSKFKFGNLETDADKKGDKTSTERCLQRHLVLVTQRKLGNDSKTLLPQGHWQEGETLRQTAERIVKEQIGSELQIKFISNAPCGFYKYKYPSEMNGKVGAKIFFYYANYKSGNPTKSKVNWLTRKELDEMLPQKYSNAVKEFLIEETY

Description

Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.

Similarity

Belongs to the EXO70 family.

Uniprot

H9JM17   A0A2H1W792   A0A2A4JQB3   A0A0N1I7W3   I4DNZ4   A0A194PIA1   + More
A0A212FL90   A0A194R061   A0A1Y1L5Z4   D6WAD3   A0A0T6BEG1   B0X635   A0A1B0FQ23   A0A1A9XB17   A0A067QFH8   A0A1W4X7D9   A0A0M5J110   A0A1Q3FGA9   A0A2J7QRD4   A0A336K3T5   Q16UP8   B8RJG5   A0A1S4FNF8   A0A2P8Y4A2   B3NEV3   A0A182SXB7   A0A182H9F5   A0A182Y1E4   A0A182WID6   A0A182MMT0   Q7Q516   A0A182I4R1   A0A2M4BWS9   A0A1A9URS2   A0A2M4AUG3   A0A2M4BXR0   A0A1W4W4Z3   Q9W086   A0A2M4AUM6   A0A182X4R2   A0A182TPP0   A0A182KAK2   A0A182V443   A0A182PHS3   W5JCA6   A0A1L8DRU2   B4IYN6   A0A182Q6Y9   A0A226EGL8   A0A3B0KAT9   A0A1A9W3E0   B4H5R4   A0A0L0CLN4   A0A2J7QRG5   Q29EZ9   B3M7A5   A0A182FFR5   B4PDU0   A0A0Q9WBR0   B4HW02   A0A1I8M749   A0A0J9RM02   A0A1I8P1E0   A0A1Q3EV02   A0A1L8DRK1   A0A1B6G310   A0A0C9RD06   W8BFV2   A0A0P4X038   A0A1B6IHH3   A0A034WLH0   B4MXT7   A0A1B6KQT0   A0A2S2NTM4   A0A0K8WD24   J3JW99   A0A182JKS2   A0A2R7WAQ8   A0A2H8TKL3   J9JSX7   C4WUX1   A0A182R2F0   A0A0K8TRT2   B4KXU8   U5ES73   A0A1B6DCR1   A0A2P6L0X6   A0A1B0DMP9   A0A0P5YU76   A0A1S3D2Z2   A0A0P6I8C9   A0A2S2QRB6   A0A1B6CUS7   A0A0L8HS31   A0A2M3ZDJ6   A0A2M4AW13   T1IXA6   A0A0J7KSV0   E9FYT6   B4QMK7  

Pubmed

19121390    26354079    22651552    22118469    28004739    18362917    + More
19820115    24845553    17510324    29403074    17994087    26483478    25244985    12364791    14747013    17210077    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20920257    23761445    26108605    15632085    17550304    25315136    22936249    24495485    25348373    22516182    23537049    26369729    21292972   

EMBL

BABH01005696    ODYU01006772    SOQ48928.1    NWSH01000781    PCG74255.1    KQ460927    + More
KPJ10816.1    AK403211    BAM19634.1    KQ459603    KPI92773.1    AGBW02007871    OWR54460.1    KQ460883    KPJ11188.1    GEZM01066563    JAV67790.1    KQ971312    EEZ98621.2    LJIG01001251    KRT85689.1    DS232400    EDS41166.1    CCAG010009298    KK853582    KDR06498.1    CP012525    ALC44811.1    GFDL01008459    JAV26586.1    NEVH01011898    PNF31154.1    UFQS01000102    UFQT01000102    SSW99644.1    SSX20024.1    CH477616    EAT38260.1    EZ000590    ACJ64464.1    PYGN01000947    PSN39092.1    CH954178    EDV50226.1    JXUM01030164    KQ560874    KXJ80525.1    AXCM01001108    AAAB01008960    EAA11413.3    APCN01002346    GGFJ01008386    MBW57527.1    GGFK01011100    MBW44421.1    GGFJ01008387    MBW57528.1    AE014296    AY071006    AAF47568.1    AAL48628.1    GGFK01011175    MBW44496.1    ADMH02001932    ETN60459.1    GFDF01004987    JAV09097.1    CH916366    EDV95546.1    AXCN02000584    LNIX01000004    OXA56287.1    OUUW01000009    SPP85250.1    CH479211    EDW33116.1    JRES01000206    KNC33278.1    PNF31163.1    CH379070    EAL29910.1    CH902618    EDV38766.1    CM000159    EDW92905.1    CH940682    KRF77568.1    CH480817    EDW50117.1    CM002912    KMY96948.1    GFDL01015903    JAV19142.1    GFDF01004988    JAV09096.1    GECZ01013076    JAS56693.1    GBYB01006175    JAG75942.1    GAMC01014401    GAMC01014399    JAB92156.1    GDRN01040718    JAI67140.1    GECU01021335    JAS86371.1    GAKP01002536    JAC56416.1    CH963876    EDW76856.1    GEBQ01026180    JAT13797.1    GGMR01007886    MBY20505.1    GDHF01008779    GDHF01003253    JAI43535.1    JAI49061.1    APGK01043767    BT127517    KB741017    KB631644    AEE62479.1    ENN75252.1    ERL84937.1    KK854491    PTY16311.1    GFXV01002870    MBW14675.1    ABLF02031057    AK341259    BAH71691.1    GDAI01000531    JAI17072.1    CH933809    EDW17620.1    GANO01003379    JAB56492.1    GEDC01013840    JAS23458.1    MWRG01002814    PRD32222.1    AJVK01007068    AJVK01007069    GDIP01054620    LRGB01000930    JAM49095.1    KZS14958.1    GDIQ01008083    JAN86654.1    GGMS01011078    MBY80281.1    GEDC01020213    JAS17085.1    KQ417510    KOF91555.1    GGFM01005831    MBW26582.1    GGFK01011487    MBW44808.1    JH431646    LBMM01003626    KMQ93309.1    GL732527    EFX87716.1    CM000363    EDX08864.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000007266    + More
UP000002320    UP000092444    UP000092443    UP000027135    UP000192223    UP000092553    UP000235965    UP000008820    UP000245037    UP000008711    UP000075901    UP000069940    UP000249989    UP000076408    UP000075920    UP000075883    UP000007062    UP000075840    UP000078200    UP000192221    UP000000803    UP000076407    UP000075902    UP000075881    UP000075903    UP000075885    UP000000673    UP000001070    UP000075886    UP000198287    UP000268350    UP000091820    UP000008744    UP000037069    UP000001819    UP000007801    UP000069272    UP000002282    UP000008792    UP000001292    UP000095301    UP000095300    UP000007798    UP000019118    UP000030742    UP000075880    UP000007819    UP000075900    UP000009192    UP000092462    UP000076858    UP000079169    UP000053454    UP000036403    UP000000305    UP000000304   

PRIDE

H9JM17    Q9W086   

Pfam

PF11788   MRP-L46        + More
PF00293   NUDIX
PF03081   Exo70
PF06201   PITH
PF00085   Thioredoxin
PF00050   Kazal_1
PF13086   AAA_11
PF05183   RdRP
PF13087   AAA_12
PF05011   DBR1
PF07648   Kazal_2

Interpro

IPR000086   NUDIX_hydrolase_dom        + More
IPR040008   MRPL46       
IPR015797   NUDIX_hydrolase-like_dom_sf       
IPR021757   Ribosomal_L46_N       
IPR033650   MRP_L46_NUDIX       
IPR016159   Cullin_repeat-like_dom_sf       
IPR004140   Exo70       
IPR036249   Thioredoxin-like_sf       
IPR034732   EPHD       
IPR010400   PITH_dom       
IPR017937   Thioredoxin_CS       
IPR013766   Thioredoxin_domain       
IPR037047   PITH_dom_sf       
IPR013083   Znf_RING/FYVE/PHD       
IPR008979   Galactose-bd-like_sf       
IPR007708   DBR1_C       
IPR041677   DNA2/NAM7_AAA_11       
IPR027417   P-loop_NTPase       
IPR003593   AAA+_ATPase       
IPR036058   Kazal_dom_sf       
IPR014001   Helicase_ATP-bd       
IPR041816   Dbr1_N       
IPR002350   Kazal_dom       
IPR041679   DNA2/NAM7-like_AAA       
IPR007855   RNA-dep_RNA_pol_euk-typ       

SUPFAM

SSF55811   SSF55811        + More
SSF74788   SSF74788       
SSF52833   SSF52833       
SSF49785   SSF49785       
SSF52540   SSF52540       
SSF100895   SSF100895       

Gene 3D

2.60.120.470     3.30.40.10    

CDD

cd04661  MRP_L46
cd00844  MPP_Dbr1_N

ProteinModelPortal

H9JM17   A0A2H1W792   A0A2A4JQB3   A0A0N1I7W3   I4DNZ4   A0A194PIA1   + More
A0A212FL90   A0A194R061   A0A1Y1L5Z4   D6WAD3   A0A0T6BEG1   B0X635   A0A1B0FQ23   A0A1A9XB17   A0A067QFH8   A0A1W4X7D9   A0A0M5J110   A0A1Q3FGA9   A0A2J7QRD4   A0A336K3T5   Q16UP8   B8RJG5   A0A1S4FNF8   A0A2P8Y4A2   B3NEV3   A0A182SXB7   A0A182H9F5   A0A182Y1E4   A0A182WID6   A0A182MMT0   Q7Q516   A0A182I4R1   A0A2M4BWS9   A0A1A9URS2   A0A2M4AUG3   A0A2M4BXR0   A0A1W4W4Z3   Q9W086   A0A2M4AUM6   A0A182X4R2   A0A182TPP0   A0A182KAK2   A0A182V443   A0A182PHS3   W5JCA6   A0A1L8DRU2   B4IYN6   A0A182Q6Y9   A0A226EGL8   A0A3B0KAT9   A0A1A9W3E0   B4H5R4   A0A0L0CLN4   A0A2J7QRG5   Q29EZ9   B3M7A5   A0A182FFR5   B4PDU0   A0A0Q9WBR0   B4HW02   A0A1I8M749   A0A0J9RM02   A0A1I8P1E0   A0A1Q3EV02   A0A1L8DRK1   A0A1B6G310   A0A0C9RD06   W8BFV2   A0A0P4X038   A0A1B6IHH3   A0A034WLH0   B4MXT7   A0A1B6KQT0   A0A2S2NTM4   A0A0K8WD24   J3JW99   A0A182JKS2   A0A2R7WAQ8   A0A2H8TKL3   J9JSX7   C4WUX1   A0A182R2F0   A0A0K8TRT2   B4KXU8   U5ES73   A0A1B6DCR1   A0A2P6L0X6   A0A1B0DMP9   A0A0P5YU76   A0A1S3D2Z2   A0A0P6I8C9   A0A2S2QRB6   A0A1B6CUS7   A0A0L8HS31   A0A2M3ZDJ6   A0A2M4AW13   T1IXA6   A0A0J7KSV0   E9FYT6   B4QMK7  

PDB

6GB2     E-value=1.03035e-41,     Score=425

KEGG

101743603    K17427 large subunit ribosomal protein L46 | (RefSeq) 39S ribosomal protein L46, mitochondrial

GO

GO:0003735   GO:0016787   GO:0005840   GO:0005762   GO:0032543   GO:0000145   GO:0006887   GO:0015031   GO:0045454   GO:0046872   GO:0005623   GO:0003968   GO:0006397   GO:0016788   GO:0004553   GO:0016705   GO:0031418   GO:0016491   GO:0004656   GO:0005783   GO:0016702   GO:0016295   GO:0016296  

PANTHER

PTHR13124   PTHR12542  

Length:

259

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00882

Exp number, first 60 AAs:

0.00825

Total prob of N-in:

0.06924

outside

1  -  259

 

 

Pi

74.827587

Theta

128.318513

Tajima's D

-0.668566

CLR

0.620663

CSRT

0.204139793010349

Interpretation

Uncertain