Gene

KWMTBOMO07189  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010566

Annotation

prolyl_4-hydroxylase_alpha_subunit_precursor_[Bombyx_mori]

Location

Bomo_Chr12(+):7567467-7587874      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.183 Nuclear   Reliability : 1.609

CDS

ATGGATGACATCCCTAACTACCTCGGCAACCCGATCAATGCTTTCACGTTGATAAAAAGATTAACGGCCGACCTTGATTTTATAGAGGATAGCATTAAAATTGGAACAGAATACATAAAGAACGTCACAATGAACCACGTGGACGTGAAATATCCGTCATTGGAAGATCTGACGGGAGCAGCTCAGGCGCTGACTCGGTTGCAGGAAACCTACTATTTAAATGTACACGATCTAGCCGAGGGTATATTGAATGGAGTTTCATACAGTACTCCTATGACGGCGAGCGATTGTTACGAACTCGGCCGGACTCTATACAACGATAAAGATTACACAAACGCCTTGGCCTGGATGAAAGAAGCGCTAAGGAAATATAAAGATGAAAACGTCATGTACCCGTTCACCGAAGTCGATATCTTGGAATATATAGGATTCGCATATTATTTAAACGGAGACGTCAAAACCGCTCTGGAATGGACTCAGAGACTTCTGTCCGTCGATCCGAAGCACGTACGAGCGCGGGGCAACATACCGCACTATCAGAAGACGATAGCCGAACAAGAGGCCGAATTAAAGAAGCAACAACGTGGGGAAACCTCGGATGAGCCTGAAGAAGAAGATGGTCAAGATTACGAATTATCAGAGTACGCAAAGGAACGCAAAGTTTACGAATCGCTGTGTCGGGGAGAAATGGAAATACCCCATGAGATTACTAAGAGGTTGAAATGTTGGTACGTCACCGACACGCATCCGTTTTTAAAGTTGGCCCCAATCAAAGTGGAGCAGATGTACGTGAAGCCCGACATATTTATGTTCCACGAAGTGATGACCGACGACGAGATTGAGTTCATCAAAAAACGAGCAAAGCCGAGGTTCAAACGGGCTGTCGTTCACGACCCTAAAACTGGTGAGCTGACACCGGCCCATTACCGCATCAGCAAGTCGTCGTGGCTCCGCGACGAGGAGTCTCCGGTCATAGCGCGCATCACGCAGCGCGTCACCGACATGACCGGGCTCAGCATGCTGCACGCCGAGGAGCTTCAGGTCGTCAACTACGGCATAGGGGGACACTACGAACCGCACTTCGACTTCGCTAGGAAACGTGAGAATCCATTCACGAAATTCGGCGGCAACAGAATAGCCACCGTCCTCTTCTACATGTCTGACGTGGCGCAGGGCGGCGCTACAGTGTTCACCGAACTTGGACTCAGTTTGTTTCCAATAAAACGAGCTGCGGCGTTCTGGTTGAACCTGCACGCGTCGGGCGAAGGAGACCTCGCCACCAGGCATGCCGCCTGCCCCGTGCTCAGGGGATCCAAGTGGGTGTCAAATAAATGGATACATCAAGGCGGGCAAGAGCTGTTGAGGCCCTGCGACCTTGAGTACCAGGAGGAGGGCATCATCCGCAAGATTCCTCGTCCAGTGCCGAAGACATCCAGTACTTTAAAATTATCAAATATAAGTTTAAAAACTGTTCCTATAACTAGAAAATGCATGAAGAAATATAGCAAAGAAAACCCTCAAAAGACCTCTAAAGACCAGTGA

Protein

MDDIPNYLGNPINAFTLIKRLTADLDFIEDSIKIGTEYIKNVTMNHVDVKYPSLEDLTGAAQALTRLQETYYLNVHDLAEGILNGVSYSTPMTASDCYELGRTLYNDKDYTNALAWMKEALRKYKDENVMYPFTEVDILEYIGFAYYLNGDVKTALEWTQRLLSVDPKHVRARGNIPHYQKTIAEQEAELKKQQRGETSDEPEEEDGQDYELSEYAKERKVYESLCRGEMEIPHEITKRLKCWYVTDTHPFLKLAPIKVEQMYVKPDIFMFHEVMTDDEIEFIKKRAKPRFKRAVVHDPKTGELTPAHYRISKSSWLRDEESPVIARITQRVTDMTGLSMLHAEELQVVNYGIGGHYEPHFDFARKRENPFTKFGGNRIATVLFYMSDVAQGGATVFTELGLSLFPIKRAAAFWLNLHASGEGDLATRHAACPVLRGSKWVSNKWIHQGGQELLRPCDLEYQEEGIIRKIPRPVPKTSSTLKLSNISLKTVPITRKCMKKYSKENPQKTSKDQ

Uniprot

Q53EK0   A0A2A4K174   A0A2H1V446   A0A194PJ61   A0A3S2P863   A0A194R0G9   + More
A0A194PH78   A0A182Y542   Q7PSX4   A0A2A3E5A6   B0XDL9   W5JLH9   A0A087ZR73   E1ZVX0   A0A1Q3FPJ6   A0A1Q3FP39   A0A1Q3FP59   A0A1Q3FP30   A0A182IDP1   A0A195AYN4   A0A195DYY7   A0A195F882   A0A023EWE6   A0A182XNH8   A0A182U7C8   A0A151WXN8   Q173S4   A0A1S4FFJ7   A0A158NP69   A0A067RK41   A0A084VN14   A0A026W8C1   A0A195CGD7   A0A182H720   A0A3L8DIF5   A0A0N0BE74   A0A0J7L862   A0A182MTX3   A0A154PH06   D6X3Y9   A0A182W447   A0A0A1X3X4   A0A034VA48   A0A182RL43   W8B8C2   A0A0K8VXA3   W8AYQ0   A0A1I8MY79   A0A1W4VQI1   T1PD32   A0A182FIG4   A0A1B6MIZ2   A0A182QSK5   B3MTB8   A0A182JID1   A0A3Q0IMV6   A0A1W4XI42   Q9VA69   B4K8R9   A0A0M4EPC7   B4PMH5   B4R1M7   A0A336MJ28   B4HZR4   A0A1J1I4Q8   B4LYM5   B3P583   U5EZI6   A0A336L025   A0A1I8Q4K5   A0A182MZX0   B4GNL7   Q29C45   A0A2J7RPT1   K7J002   A0A194R5Q5   A0A3B0JX82   A0A0C9PRJ6   B4JV99   A0A1B0CQR2   A0A1B6CXX7   E0VU49   A0A0P4Z620   B4NGW2   A0A0T6AZY8   E9G3W4   A0A0P5JGF9   A0A2K8JSJ0   A0A0P4YLU8   A0A0P5IUW0   A0A161N0P5   A0A0P4YFH3   A0A0N8AC92   A0A0P5KMC9   A0A0K8TML1   A0A0P5L1V0   A0A0P5ELI2   A0A0N8B8C6   A0A0P5JG06  

Pubmed

15890264    19121390    26354079    25244985    12364791    14747013    + More
17210077    20920257    23761445    20798317    24945155    17510324    21347285    24845553    24438588    24508170    26483478    30249741    18362917    19820115    25830018    25348373    24495485    25315136    17994087    18057021    10731132    12537568    12537572    12537573    12537574    11850189    16110336    17569856    17569867    26109357    26109356    17550304    15632085    20075255    20566863    21292972    26369729   

EMBL

BABH01005687    BABH01005688    BABH01005689    AY099068    AAM21932.1    NWSH01000298    + More
PCG77644.1    ODYU01000375    SOQ35054.1    KQ459603    KPI92759.1    RSAL01000003    RVE54746.1    KQ460883    KPJ11197.1    KPI92761.1    AAAB01008811    EAA04901.5    KZ288375    PBC26674.1    DS232767    EDS45529.1    ADMH02001195    ETN63765.1    GL434663    EFN74662.1    GFDL01005637    JAV29408.1    GFDL01005763    JAV29282.1    GFDL01005670    JAV29375.1    GFDL01005694    JAV29351.1    APCN01004753    KQ976703    KYM77150.1    KQ980066    KYN17937.1    KQ981727    KYN36825.1    GAPW01000839    JAC12759.1    KQ982668    KYQ52537.1    CH477417    EAT41311.1    ADTU01022253    ADTU01022254    ADTU01022255    ADTU01022256    ADTU01022257    KK852425    KDR24152.1    ATLV01014671    KE524978    KFB39358.1    KK107347    EZA52305.1    KQ977791    KYM99809.1    JXUM01115432    JXUM01115433    KQ565879    KXJ70574.1    QOIP01000007    RLU20131.1    KQ435836    KOX71492.1    LBMM01000330    KMR00777.1    AXCM01009514    KQ434896    KZC10754.1    KQ971379    EEZ97484.1    GBXI01008944    JAD05348.1    GAKP01019972    GAKP01019971    GAKP01019970    JAC38982.1    GAMC01020541    JAB86014.1    GDHF01030537    GDHF01012446    GDHF01008817    GDHF01008803    GDHF01001872    JAI21777.1    JAI39868.1    JAI43497.1    JAI43511.1    JAI50442.1    GAMC01020539    JAB86016.1    KA645858    AFP60487.1    GEBQ01004104    JAT35873.1    AXCN02002023    CH902623    EDV30508.1    KPU72900.1    AE014297    AY052109    AF495536    AAF57053.2    AAK93533.1    AAM18058.1    CH933806    EDW15488.2    CP012526    ALC47627.1    CM000160    EDW99109.2    CM000364    EDX15015.1    UFQT01001304    SSX29915.1    CH480819    EDW53521.1    CVRI01000040    CRK94746.1    CH940650    EDW68045.2    CH954182    EDV53066.1    GANO01000729    JAB59142.1    UFQS01001467    UFQT01001467    SSX11130.1    SSX30701.1    CH479186    EDW39343.1    CM000070    EAL26796.1    NEVH01001355    PNF42840.1    KPJ11196.1    OUUW01000005    SPP80110.1    GBYB01003947    GBYB01003948    JAG73714.1    JAG73715.1    CH916374    EDV91419.1    AJWK01023887    GEDC01019014    JAS18284.1    AAZO01005441    DS235780    EEB16905.1    GDIP01229335    JAI94066.1    CH964272    EDW84459.1    LJIG01022453    KRT80516.1    GL732531    EFX85841.1    GDIQ01200303    JAK51422.1    KY031259    ATU83010.1    GDIP01229334    JAI94067.1    GDIQ01208806    GDIQ01207552    JAK44173.1    GEMB01002682    JAS00512.1    GDIP01229336    JAI94065.1    GDIP01161601    JAJ61801.1    GDIQ01208805    GDIQ01207550    GDIQ01202853    GDIP01089557    JAK44175.1    JAM14158.1    GDAI01002458    JAI15145.1    GDIQ01207551    GDIQ01183655    JAK68070.1    GDIP01144744    JAJ78658.1    GDIQ01202851    JAK48874.1    GDIQ01202852    JAK48873.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000053240    UP000076408    + More
UP000007062    UP000242457    UP000002320    UP000000673    UP000005203    UP000000311    UP000075840    UP000078540    UP000078492    UP000078541    UP000076407    UP000075902    UP000075809    UP000008820    UP000005205    UP000027135    UP000030765    UP000053097    UP000078542    UP000069940    UP000249989    UP000279307    UP000053105    UP000036403    UP000075883    UP000076502    UP000007266    UP000075920    UP000075900    UP000095301    UP000192221    UP000069272    UP000075886    UP000007801    UP000075880    UP000079169    UP000192223    UP000000803    UP000009192    UP000092553    UP000002282    UP000000304    UP000001292    UP000183832    UP000008792    UP000008711    UP000095300    UP000075884    UP000008744    UP000001819    UP000235965    UP000002358    UP000268350    UP000001070    UP000092461    UP000009046    UP000007798    UP000000305   

PRIDE

Q53EK0    Q9VA69   

Pfam

PF08336   P4Ha_N        + More
PF13640   2OG-FeII_Oxy_3

Interpro

IPR005123   Oxoglu/Fe-dep_dioxygenase        + More
IPR006620   Pro_4_hyd_alph       
IPR011990   TPR-like_helical_dom_sf       
IPR019734   TPR_repeat       
IPR013547   Pro_4_hyd_alph_N       
IPR013026   TPR-contain_dom       

SUPFAM

SSF48452   SSF48452       

Gene 3D

1.25.40.10    

ProteinModelPortal

Q53EK0   A0A2A4K174   A0A2H1V446   A0A194PJ61   A0A3S2P863   A0A194R0G9   + More
A0A194PH78   A0A182Y542   Q7PSX4   A0A2A3E5A6   B0XDL9   W5JLH9   A0A087ZR73   E1ZVX0   A0A1Q3FPJ6   A0A1Q3FP39   A0A1Q3FP59   A0A1Q3FP30   A0A182IDP1   A0A195AYN4   A0A195DYY7   A0A195F882   A0A023EWE6   A0A182XNH8   A0A182U7C8   A0A151WXN8   Q173S4   A0A1S4FFJ7   A0A158NP69   A0A067RK41   A0A084VN14   A0A026W8C1   A0A195CGD7   A0A182H720   A0A3L8DIF5   A0A0N0BE74   A0A0J7L862   A0A182MTX3   A0A154PH06   D6X3Y9   A0A182W447   A0A0A1X3X4   A0A034VA48   A0A182RL43   W8B8C2   A0A0K8VXA3   W8AYQ0   A0A1I8MY79   A0A1W4VQI1   T1PD32   A0A182FIG4   A0A1B6MIZ2   A0A182QSK5   B3MTB8   A0A182JID1   A0A3Q0IMV6   A0A1W4XI42   Q9VA69   B4K8R9   A0A0M4EPC7   B4PMH5   B4R1M7   A0A336MJ28   B4HZR4   A0A1J1I4Q8   B4LYM5   B3P583   U5EZI6   A0A336L025   A0A1I8Q4K5   A0A182MZX0   B4GNL7   Q29C45   A0A2J7RPT1   K7J002   A0A194R5Q5   A0A3B0JX82   A0A0C9PRJ6   B4JV99   A0A1B0CQR2   A0A1B6CXX7   E0VU49   A0A0P4Z620   B4NGW2   A0A0T6AZY8   E9G3W4   A0A0P5JGF9   A0A2K8JSJ0   A0A0P4YLU8   A0A0P5IUW0   A0A161N0P5   A0A0P4YFH3   A0A0N8AC92   A0A0P5KMC9   A0A0K8TML1   A0A0P5L1V0   A0A0P5ELI2   A0A0N8B8C6   A0A0P5JG06  

PDB

2V4A     E-value=5.97581e-29,     Score=319

KEGG

692683    K00472 prolyl 4-hydroxylase [EC:1.14.11.2] | (RefSeq) prolyl 4-hydroxylase alpha subunit

PATHWAY

00330    Arginine and proline metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016702   GO:0005783   GO:0004656   GO:0005506   GO:0031418   GO:0016021   GO:0018401   GO:0012505   GO:0005515   GO:0016705   GO:0016491   GO:0016295   GO:0016296   GO:0055114  

Length:

513

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.11667

Exp number, first 60 AAs:

0.00095

Total prob of N-in:

0.00232

outside

1  -  513

 

 

Pi

178.608739

Theta

140.598039

Tajima's D

-0.774375

CLR

1.065705

CSRT

0.180740962951852

Interpretation

Uncertain