SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07179
Pre Gene Modal
BGIBMGA010564
Annotation
PREDICTED:_uncharacterized_protein_LOC101745245_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.664 Nuclear   Reliability : 2.288
 

Sequence

CDS
ATGGGAGCCAACGCTGATGCGAAAACTCGGAGGAAGGTGGCGAGCAAATCAGGCTCCTTAAAGGGCACGTACGTGCATGCCCTGAATTGCGTGGTCACTGCCATGGGTAGGCTCCTAGAGGCATTTCTCCAGCGCACTGCCACGGAGGAAACAGCTGGCCTGCGGTCGCAGCTGGAGAGCTTACAGGCTTTGTACGCCTGCGTTCAGAGTGAGAATGCAAAGTTTCGGGTGGAAAGTGTAAAGTTGCGGGAGGAGATGGCCGCAATGCGTGTGGCCATTGATGGTGTAAGGAGACAGCGGGGCTGTTCGGTTTCCCCACCACCACCGCCCCAAGTGCAAGAGGCCATAGTGGCGGAAAAAGATAAGGAGATCGAAGACCTCAAGAGGCGCCTAGCCATTCTTGAGGCTCGCACCTCTACAGTAGTGCGCGCGAGGCCACCGCTGGCACACGAGCAGCCAGCGCAGGGGCTGGAGCTGGACAAACGCCCTCCTCCGACCCCCGGCTCGACGGCGGCGGCACGGCGCCGAGAGGGAAGAAGAGCTCTCCCTCTCCCGTTCCGCCGCCTCCTTCTGCGAGATGGTGGACTCGCAGAAGTCGAGCATCGCCTGCCAGGACTCGTCGCTGCCGAGCATCGTAGCCACGATGGTCGGAAGCGACAAGTCCGGTCCTATTTTTGCAACGAGGACGCGGCGCTGCTCCGCGAAAGCGGTGCAGTACGCGAGCGTGTGCTCCGCCGTGTCCTCGTTGCAGCCACTACAGTGGTGGCACTTCGGCGTCGGCTCCCTCCGGGCGACGAGGTGCAGGTAGCGACCGAAACAGCCGTGTCCCGTGAGCACCTGCGTCGCTCGGAAGAGCGTATTGTGTGGAATAAACTCATTATGGTTGGACAAAATACATTCGACAACGGAAATTCGCACAGGATTTTCATGAACGACGATGCAGAGTTTTACGAAAATAGTAACAGTATTCAGAGGCAGGATGCAGCTGACACTTTAAATGAGTATTCGTCAAGATTAAACTGGAAAGAAACGGGAGAAAGTATATTAGACATAGGATGTGGCGACGGAAGTGTCACTGATATCCTGAGATCATACTTACCAAAAAGTAGAAAGACTTTGTTGGCCTGCGATATCAGTGAGAGAATGGTCAAGCACGCCGAAGGGCGTTACGGAAATAACACGACAGCATTTACTGTACTTAATATAGAAGGTGATATTCCCGATGAGCTGAAAGGAAAATTCGATCATGTTTTCTCATTTTACGCATTACATTGGATACAGAATCAGGAAAAAGGATTTACAAATATTCATAGTATGATGCGTGATGACGGAGAATGCCTTTTAACCTTTCTCGCATATTCGCCAATATATAGTATGTTTGAAGGACTCAAAGACACACCCAAATGGACTGCATGGCTTAAGGATATCAATCTATTTCTTTCGCCTTATCATGATTGCATGGTAATAACCTTAAATCAACAATAA
Protein
MGANADAKTRRKVASKSGSLKGTYVHALNCVVTAMGRLLEAFLQRTATEETAGLRSQLESLQALYACVQSENAKFRVESVKLREEMAAMRVAIDGVRRQRGCSVSPPPPPQVQEAIVAEKDKEIEDLKRRLAILEARTSTVVRARPPLAHEQPAQGLELDKRPPPTPGSTAAARRREGRRALPLPFRRLLLRDGGLAEVEHRLPGLVAAEHRSHDGRKRQVRSYFCNEDAALLRESGAVRERVLRRVLVAATTVVALRRRLPPGDEVQVATETAVSREHLRRSEERIVWNKLIMVGQNTFDNGNSHRIFMNDDAEFYENSNSIQRQDAADTLNEYSSRLNWKETGESILDIGCGDGSVTDILRSYLPKSRKTLLACDISERMVKHAEGRYGNNTTAFTVLNIEGDIPDELKGKFDHVFSFYALHWIQNQEKGFTNIHSMMRDDGECLLTFLAYSPIYSMFEGLKDTPKWTAWLKDINLFLSPYHDCMVITLNQQ

Summary

Uniprot
ProteinModelPortal
PDB
3CCF     E-value=2.31114e-06,     Score=124

Ontologies

GO

Topology

Length:
494
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.7407
Exp number, first 60 AAs:
1.72066
Total prob of N-in:
0.09294
outside
1  -  494
 
 

Population Genetic Test Statistics

Pi
2.947175
Theta
214.18747
Tajima's D
-1.879399
CLR
205.440035
CSRT
0.0210489475526224
Interpretation
Possibly Positive selection

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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