Gene

KWMTBOMO07177  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010562

Annotation

PREDICTED:_striatin_isoform_X1_[Papilio_polytes]

Location

Bomo_Chr12(+):7127139-7141231      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.367 Nuclear   Reliability : 1.946

CDS

ATGGATGATAACTCCGTATCTCATCACAACGGAGGGCAAGTGGGATCTCAAATTGGAGTCAGTGTAAATAATAAACAAAATGAAGAACCCAGTCAAAGTGTTCAGTATTCAATACCGGGCATTTTGCATTTTATCCAACACGAATGGGCGAGATTCGAACTGGAGAGATCACAATGGGAGGTGGACAAAGCAGAATTTGAGGCACGGATCGCCTTTCTCCAAGGTGAGAGGAAGGGTCAAGAAAATTTAAAAAATGATCTCGTGAGGCGGATTAAAATGCTTGAATATGCATTAAAGCAAGAAAGAGCAAAATTCCACAAGCTCAAGTATGGAGTGGAGTTGCAACAAGGAGACGTAAGGCCCCCGCCGGAAGAGTCAGCGACAGAGCCCGAACCAGTGGAACGCACGCAATGGAAGCAGGGAAGACAATTTATAAAACAGTACTTGCAGGAAATAGGCTACACGGATACAATTCTGGACGTGCGCTCTAATAGGGTACGCGCTCTCCTCGGTTTGAAGAACGAGGATTCAGATAACTCGAACTACAGAAACTATGAAAAACAACAGCACGACAGATGCGATTACTCTGCGAACCATATGGTTCGCAAATATGACTATGGTAAAGAGCCACGCAAAACGAGCGGTTCGTCTGGAGGCGGTTACAATGATGAAGGGATGTCCGTACAGGAGACAGCTGCAGTATTCGCTAACTTCGAGTTCTTGACCAATCAAGAAATGGATATGGACGAAATTGACGATCTCGATGCCAAACAGACTCTTCACGCTTCTGGTAAACAGGGTGAAGAGGTCGATCATGAAGCAGAAGAAGTTTTGAATGAGCTTAATATGCTTACTATAAATGAAGTCGTAAGTGCTGGCCAGGGGGATGAGTATCAAGGTGGAGTAACGAGCGGCGGCAGTGCGAGTGCGAGTGCGGCGTCGAGCAGCGTCGGCAGCGGGAGCGGCGCCGGGGAGGCTGACGAGGAGACGCTCGGACTCGGAGAGCTTGCCCAGCTCACCGTCAGCAACGAGCCCGAAGCTTATGATGTTGCCGGCGCTAATAAAGAATCTTTCCGCAAGACGTGGAACGCCAAATACACGCTCCGCTCGCACTTTGATGGGGTCCGCGCTATCGCATTCCATCCGACAGAAGCGGCGCTGGTGACAGCATCCGAGGATCACACATTGAAGTTATGGAACTTGCAACGTACCGTACCTGCGAAGAGATCGGCTGGTCTGGATGTGGAGCCACTGTACACGTTCCGCGCGCACTCAGCGCCCGTGCTCTGTCTCGCCATGGGGGCGCCGCGCTCTGAGGAATGCTTCTCCGGAGGGCTCGACGGCACCATTCGAGTCTGGAACCTACCTCCTCCCACCGCTGACCCGTACGATCCGTATGATCCCGCTGTCCAGGGTGCGGTTCTACGCGAACACACGGATGCGGTGTGGTCGCTGGCGAGTGCGTGCGGACGACTGGCGTCTGCATCGGCGGACGGCACGGTGCGGCTGTGGGCGCCGCGAGCCCCGCGCCCCCTGCTGGCGACGCTGCGTCCGGACGACGGCCCGCCCCCCGCCGCCGGGCCCGCCTTGGCGCCCTCGCCCGCGCCCGCTGCTCTCGACTTTGCCGACGCAGCCTCGCGAGCCGCAGTCGCTTACCGCGACGGATCTCTTCTGCTCTACGACCTTGAGACTGGCCAGGCCGTGTTGCGGTTGGGTTGCGACAGTCCCGCGAACCGCGTTCGTTCTCATCCGACGCTGCCGATGTTGGTGACCGCGCACGAGGACCGACACATTCGGTTCTGGGACGCGGTCTCGGGGCAGTGCTCGCACGCGATGGTGGCCCACTTGGACGCCGTCACGGGACTCGCTCTCGATCCCAACGGCCTGTTCCTGCTATCGGGCTCGCACGACTGCTCCGTGCGCCTCTGGAATCTCGACACGAAGACTTGCGTGCAGGAGATCACCGCGCACCGCAAGAAGTTCGACGAAAGCATCCTCGACGTCGCCTTCCACCCGTTGCGGCCGTACATCGCTAGTGCGGGCGCCGACGGTCTCGCCAAAGTATTCGTCTGA

Protein

MDDNSVSHHNGGQVGSQIGVSVNNKQNEEPSQSVQYSIPGILHFIQHEWARFELERSQWEVDKAEFEARIAFLQGERKGQENLKNDLVRRIKMLEYALKQERAKFHKLKYGVELQQGDVRPPPEESATEPEPVERTQWKQGRQFIKQYLQEIGYTDTILDVRSNRVRALLGLKNEDSDNSNYRNYEKQQHDRCDYSANHMVRKYDYGKEPRKTSGSSGGGYNDEGMSVQETAAVFANFEFLTNQEMDMDEIDDLDAKQTLHASGKQGEEVDHEAEEVLNELNMLTINEVVSAGQGDEYQGGVTSGGSASASAASSSVGSGSGAGEADEETLGLGELAQLTVSNEPEAYDVAGANKESFRKTWNAKYTLRSHFDGVRAIAFHPTEAALVTASEDHTLKLWNLQRTVPAKRSAGLDVEPLYTFRAHSAPVLCLAMGAPRSEECFSGGLDGTIRVWNLPPPTADPYDPYDPAVQGAVLREHTDAVWSLASACGRLASASADGTVRLWAPRAPRPLLATLRPDDGPPPAAGPALAPSPAPAALDFADAASRAAVAYRDGSLLLYDLETGQAVLRLGCDSPANRVRSHPTLPMLVTAHEDRHIRFWDAVSGQCSHAMVAHLDAVTGLALDPNGLFLLSGSHDCSVRLWNLDTKTCVQEITAHRKKFDESILDVAFHPLRPYIASAGADGLAKVFV

Uniprot

H9JM10   A0A2H1VCR1   A0A2A4JZJ0   A0A194PI77   A0A194R119   A0A212EPL0   + More
A0A2J7PMR0   D2A379   A0A067RB71   A0A1B6GEK5   A0A1B6L3Z5   A0A1B6KUB9   A0A1Y1NC86   A0A146M3K7   A0A1B6DPZ4   A0A151JTH3   A0A0A9XRX4   A0A151IY21   F4W3Z0   A0A195CJX0   A0A232F9R1   E2APP1   A0A151X1D0   A0A158NTD9   A0A195B3U5   K7IPR7   V9IC70   A0A182YM17   A0A0K8TSG0   A0A224XKL5   A0A088AAE5   A0A0V0GA14   A0A2L2YC45   E2BKP6   A0A2A3E2F9   A0A1L8DXR1   U4UFJ6   A0A023F2U1   A0A2M3Z3A1   A0A3F2YQ63   A0A2M4CRA9   A0A1L8DXA7   A0A224YV07   A0A131YUX5   A0A2C9GQ85   A0A1S4GZ53   A0A087TF71   E9I9R1   A0A2M3ZGJ0   A0A2M4A2X9   A0A0C9R1K6   A0A2M4BF89   A0A2M3Z3E9   A0A2M4CSN6   A0A1E1XLB8   A0A1Q3F507   A0A293MZM5   A0A1Q3F5A9   Q5TS28   A0A084VMP2   A0A034WEC2   A0A1Q3F599   A0A0A1WW61   A0A336LKD5   A0A1I8P0K7   A0A0R3NT29   A0A1I8P0L3   A0A0P8XET0   A0A0R3NZ13   A0A0K8UID1   A0A0K8VRE8   A0A0P8XF23   A0A034WCT5   A0A1I8P0J8   A0A0A1XMI3   A0A0R1DRW7   A0A0Q5WKC0   A0A0J9TID4   B4NWC6   B3N6Z3   B4HYD6   A0A0J9QY72   D3DML3   A0A3B3SRG6   A0A3Q2I8K1   A0A146ZM85   A0A3B4ZYP9   A0A3Q0S0B1   A0A3Q1IK73   A0A3B4UCG7   A0A087YKL4   A0A3Q3G580   A0A3P8T3F5   A0A1A7XRM9   H2TV49   A0A3Q3K1W6   A0A3P9B7G1   A0A3Q1B1Y2   A0A3Q3FEF8  

Pubmed

19121390    26354079    22118469    18362917    19820115    24845553    + More
28004739    26823975    25401762    21719571    28648823    20798317    21347285    20075255    25244985    26369729    26561354    23537049    25474469    28797301    26830274    21282665    29209593    12364791    24438588    25348373    25830018    15632085    17994087    23185243    18057021    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    29240929    19892987    21551351    25186727   

EMBL

BABH01005659    ODYU01001839    SOQ38591.1    NWSH01000345    PCG77229.1    KQ459603    + More
KPI92748.1    KQ460883    KPJ11209.1    AGBW02013442    OWR43432.1    NEVH01023960    PNF17621.1    KQ971338    EFA01950.2    KK852572    KDR21101.1    GECZ01008905    JAS60864.1    GEBQ01026434    GEBQ01021538    GEBQ01012024    JAT13543.1    JAT18439.1    JAT27953.1    GEBQ01024940    GEBQ01015106    GEBQ01013243    JAT15037.1    JAT24871.1    JAT26734.1    GEZM01006997    JAV95493.1    GDHC01004286    JAQ14343.1    GEDC01025028    GEDC01024780    GEDC01009567    JAS12270.1    JAS12518.1    JAS27731.1    KQ981885    KYN33866.1    GBHO01022018    GBHO01022016    GBHO01022015    JAG21586.1    JAG21588.1    JAG21589.1    KQ980778    KYN13213.1    GL887491    EGI70986.1    KQ977642    KYN01025.1    NNAY01000577    OXU27586.1    GL441572    EFN64592.1    KQ982585    KYQ54223.1    ADTU01025849    ADTU01025850    KQ976625    KYM78945.1    JR039466    AEY58718.1    GDAI01000306    JAI17297.1    GFTR01007867    JAW08559.1    GECL01001363    JAP04761.1    IAAA01013954    LAA04940.1    GL448819    EFN83744.1    KZ288444    PBC25664.1    GFDF01003039    JAV11045.1    KB632166    ERL89331.1    GBBI01003062    JAC15650.1    GGFM01002245    MBW22996.1    GGFL01003684    MBW67862.1    GFDF01003040    JAV11044.1    GFPF01006658    MAA17804.1    GEDV01005780    JAP82777.1    APCN01000644    KK114949    KFM63760.1    GL761846    EFZ22677.1    GGFM01006936    MBW27687.1    GGFK01001845    MBW35166.1    GBYB01006737    JAG76504.1    GGFJ01002561    MBW51702.1    GGFM01002298    MBW23049.1    GGFL01004097    MBW68275.1    GFAA01003406    JAU00029.1    GFDL01012398    JAV22647.1    GFWV01020660    MAA45388.1    GFDL01012387    JAV22658.1    AAAB01008944    EAL40293.3    ATLV01014616    KE524975    KFB39236.1    GAKP01006457    JAC52495.1    GFDL01012397    JAV22648.1    GBXI01011451    JAD02841.1    UFQT01000040    SSX18664.1    CH379060    KRT04092.1    CH902620    KPU73347.1    KRT04094.1    KRT04096.1    KRT04097.1    KRT04098.1    KRT04099.1    GDHF01031926    GDHF01027555    GDHF01026021    GDHF01022898    GDHF01021380    GDHF01012717    GDHF01009805    GDHF01006097    GDHF01002015    JAI20388.1    JAI24759.1    JAI26293.1    JAI29416.1    JAI30934.1    JAI39597.1    JAI42509.1    JAI46217.1    JAI50299.1    GDHF01011169    JAI41145.1    KPU73345.1    KPU73346.1    KPU73348.1    KPU73349.1    KPU73351.1    KPU73352.1    GAKP01006458    JAC52494.1    GBXI01015598    GBXI01006025    GBXI01002212    JAC98693.1    JAD08267.1    JAD12080.1    CM000157    KRJ97785.1    CH954177    KQS70731.1    CM002910    KMY88905.1    EDW88443.1    KRJ97781.1    KRJ97782.1    KRJ97783.1    KRJ97784.1    KRJ97786.1    KRJ97788.1    EDV59289.1    KQS70727.1    KQS70728.1    KQS70729.1    KQS70733.1    KQS70734.1    CH480818    EDW52066.1    KMY88902.1    KMY88907.1    KMY88908.1    BT120179    AE014134    ADB91427.1    AFH03610.1    GCES01018844    JAR67479.1    AYCK01018986    HADW01019045    HADX01003539    SBP20445.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000235965    + More
UP000007266    UP000027135    UP000078541    UP000078492    UP000007755    UP000078542    UP000215335    UP000000311    UP000075809    UP000005205    UP000078540    UP000002358    UP000076408    UP000005203    UP000008237    UP000242457    UP000030742    UP000069272    UP000075840    UP000054359    UP000007062    UP000030765    UP000095300    UP000001819    UP000007801    UP000002282    UP000008711    UP000001292    UP000000803    UP000261540    UP000002281    UP000261400    UP000261340    UP000265040    UP000261420    UP000028760    UP000261660    UP000265080    UP000005226    UP000261600    UP000265160    UP000257160    UP000264800   

PRIDE

H9JM10    D3DML3   

Pfam

PF00400   WD40        + More
PF08232   Striatin
PF00069   Pkinase
PF17820   PDZ_6

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR001680   WD40_repeat       
IPR013258   Striatin_N       
IPR017986   WD40_repeat_dom       
IPR020472   G-protein_beta_WD-40_rep       
IPR036322   WD40_repeat_dom_sf       
IPR019775   WD40_repeat_CS       
IPR000961   AGC-kinase_C       
IPR000719   Prot_kinase_dom       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR041489   PDZ_6       
IPR001478   PDZ       
IPR036034   PDZ_sf       

SUPFAM

SSF50978   SSF50978        + More
SSF50156   SSF50156       
SSF56112   SSF56112       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JM10   A0A2H1VCR1   A0A2A4JZJ0   A0A194PI77   A0A194R119   A0A212EPL0   + More
A0A2J7PMR0   D2A379   A0A067RB71   A0A1B6GEK5   A0A1B6L3Z5   A0A1B6KUB9   A0A1Y1NC86   A0A146M3K7   A0A1B6DPZ4   A0A151JTH3   A0A0A9XRX4   A0A151IY21   F4W3Z0   A0A195CJX0   A0A232F9R1   E2APP1   A0A151X1D0   A0A158NTD9   A0A195B3U5   K7IPR7   V9IC70   A0A182YM17   A0A0K8TSG0   A0A224XKL5   A0A088AAE5   A0A0V0GA14   A0A2L2YC45   E2BKP6   A0A2A3E2F9   A0A1L8DXR1   U4UFJ6   A0A023F2U1   A0A2M3Z3A1   A0A3F2YQ63   A0A2M4CRA9   A0A1L8DXA7   A0A224YV07   A0A131YUX5   A0A2C9GQ85   A0A1S4GZ53   A0A087TF71   E9I9R1   A0A2M3ZGJ0   A0A2M4A2X9   A0A0C9R1K6   A0A2M4BF89   A0A2M3Z3E9   A0A2M4CSN6   A0A1E1XLB8   A0A1Q3F507   A0A293MZM5   A0A1Q3F5A9   Q5TS28   A0A084VMP2   A0A034WEC2   A0A1Q3F599   A0A0A1WW61   A0A336LKD5   A0A1I8P0K7   A0A0R3NT29   A0A1I8P0L3   A0A0P8XET0   A0A0R3NZ13   A0A0K8UID1   A0A0K8VRE8   A0A0P8XF23   A0A034WCT5   A0A1I8P0J8   A0A0A1XMI3   A0A0R1DRW7   A0A0Q5WKC0   A0A0J9TID4   B4NWC6   B3N6Z3   B4HYD6   A0A0J9QY72   D3DML3   A0A3B3SRG6   A0A3Q2I8K1   A0A146ZM85   A0A3B4ZYP9   A0A3Q0S0B1   A0A3Q1IK73   A0A3B4UCG7   A0A087YKL4   A0A3Q3G580   A0A3P8T3F5   A0A1A7XRM9   H2TV49   A0A3Q3K1W6   A0A3P9B7G1   A0A3Q1B1Y2   A0A3Q3FEF8  

PDB

2YMU     E-value=3.22545e-19,     Score=236

KEGG

101742459    K17608 striatin 1/3/4 | (RefSeq) striatin-3

PATHWAY

04013    MAPK signaling pathway - fly - Bombyx mori (domestic silkworm)

GO

GO:0005634   GO:0046330   GO:0005737   GO:2000736   GO:0090443   GO:0035331   GO:0007391   GO:0042332   GO:0016301   GO:0007254   GO:0046579   GO:0005524   GO:0004674   GO:0005515   GO:0008270   GO:0000166   GO:0031032   GO:0030060   GO:0019752   GO:0016491   GO:0016295   GO:0016296  

Length:

690

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0026

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00045

outside

1  -  690

 

 

Pi

199.685052

Theta

153.962437

Tajima's D

-0.773561

CLR

100.244791

CSRT

0.178591070446478

Interpretation

Uncertain