Gene

KWMTBOMO07174

Pre Gene Modal

BGIBMGA010397

Annotation

PREDICTED:_integral_membrane_protein_GPR180-like_[Papilio_xuthus]

Location

Bomo_Chr12(-):7093452-7101938      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.865

CDS

ATGTGTATTCAAGATCTCTTGATATTTTGTTGTCTTTTCGTTGTTGGATCATCGACGCACATAACAGGAGAGTTTTCTACTGCAGAATTCTTCAAGTTTTTAGTAAAATTTGGTTTCCAAAAGACCGACATACATTTTCAGAAAGAAACATATGGTTATATTTTTGGAAACATTACAGCAAACGATCACTTTAAACATCCCATAACATTTGCAGTTCTTGATAGAAGACATTTTTTACATTATTATAAGAATAGAGATATTATTGATAAAGAAATGGCATGTCAATCAATGTTCCAAAACTTAAATGGAACTGCCTACCATCCAAAATGTAATGCTTACGGTCAAGACCTATTTCGACGTGTACCTTGTATAAAGTCTGAACTATGTATTGACGAGGACACTCCATGGAATGTAATTAAGAAAAATCAATTTACCTACGTGATACAGAACACAGGGCAACCACGATTTTGGTATGTTTCTATGGTTGCCTGCTACTTAAATGAAGAAACTTGTTCATGGCATCACTATCCAGGAGCACCAAAAGACAACAAAACATTAAAAGCTATGCCACAAGCATTACAGTATGACTTCTGGTTAGTGAATGGAAGTCCAAACCTCTCATTCTACAATACATTGTTGTATCAATTTTCATTCGATCGACAAAATACATTGGAATTATATCTTATGTTTTGGCTATGTTATATTATATTGCTGCCCGTCCAGTTGTATGCAGTTAGAACACAAAAGCACCCGGTAACAAAACTGTTCACATTTAGTTTGGTCTTAGAGTTCATAGCTCTTTGTTTCAATGTTTTGCATACTGTCAAATTCGCTGTTGATGGAGTAGGATTTGCTGGTCTGTCAGTTGCAGGAGATATTCTTGATATTTTGAGTAGAACTTTGTTTATGTTACTACTCCTACTGTTGGCGAAAGGTTGGGCAGTGACGCGGTTGGAACTTACATACAAGCCCCTTGTTTTTGGAGTATGGATTATATATGGTGTGGTCCATATTTTATTGTACGTATGGAATACTATTGAGGTCGACATAATTGAAGACATCGATGAATACCAAACATGGCCGGGATGGTTGATTTTGGCTCTAAGGGTAGCCATCATGATATGGTTCGTCCTGGAATTACGTAACACGATGATGTACGAACATAATATGCCGAAATTGAACTTCTTTTTGCACTTTGGAGCTTCGAGCCTCGTATGGTATTACTTATTCGGCGGACTGTTTAGCTTTTTGTGTGATGGCGCATTTGTTATGGCCAACACGCTCAGAACAATACTTACTTCTTGCGCCTCCTAA

Protein

MCIQDLLIFCCLFVVGSSTHITGEFSTAEFFKFLVKFGFQKTDIHFQKETYGYIFGNITANDHFKHPITFAVLDRRHFLHYYKNRDIIDKEMACQSMFQNLNGTAYHPKCNAYGQDLFRRVPCIKSELCIDEDTPWNVIKKNQFTYVIQNTGQPRFWYVSMVACYLNEETCSWHHYPGAPKDNKTLKAMPQALQYDFWLVNGSPNLSFYNTLLYQFSFDRQNTLELYLMFWLCYIILLPVQLYAVRTQKHPVTKLFTFSLVLEFIALCFNVLHTVKFAVDGVGFAGLSVAGDILDILSRTLFMLLLLLLAKGWAVTRLELTYKPLVFGVWIIYGVVHILLYVWNTIEVDIIEDIDEYQTWPGWLILALRVAIMIWFVLELRNTMMYEHNMPKLNFFLHFGASSLVWYYLFGGLFSFLCDGAFVMANTLRTILTSCAS

Uniprot

A0A2A4K0S4   A0A1E1WKU2   A0A0L7KH00   A0A212EW85   A0A194PNP4   E9IYV6   + More
A0A0J7NV49   A0A195F3W2   A0A0M8ZZD2   K7J5W3   A0A151XEI9   A0A195DBB5   F4WZ24   E2A0J4   A0A232EN22   A0A158NDM3   A0A195BQS1   A0A026VY08   H9JLJ6   E2C5E4   A0A088A7T3   A0A195CL80   A0A2A3ENP2   V5G6T3   A0A2P8ZB79   A0A0C9QKU7   A0A0L7RBA6   D6WF04   A0A0C9RWM6   A0A067R9D2   A0A1Y1MAY0   E0VRA0   T1HIB3   A0A146L419   A0A146LJ77   N6UGF3   J3JT91   A0A1B6E4V9   A0A0T6B5I7   A0A182VHS0   A0A182YJE7   A0A182PC68   A0A182R4C4   Q7PZ34   A0A182WEG5   Q16RT5   A0A182KCM8   A0A182L4F3   A0A182HH04   A0A182LXD2   A0A182N2J7   A0A084WBI5   B0WS88   A0A1Q3EWX8   A0A1A9UF76   A0A1A9YC70   A0A1B0BDL9   A0A182QWI8   A0A182IXH0   A0A1B0FNJ1   A0A2M3ZA19   A0A1Y1MAA6   A0A182FTB1   A0A2M4BID5   A0A2M4AQV4   W5JF78   B4KNP7   A0A0L0CM85   A0A1A9Z2D3   A0A1A9X3E5   A0A1I8MZ13   B4GHD1   B5E0N1   B4LM60   A0A0Q9WF86   A0A0A9XFT5   B3MJ26   A0A3B0J2K0   A0A1I8PCS2   A0A3B0J219   A0A0K8TF19   A0A1W4UZY3   A0A0M3QUN4   B4J6C2   A0A182XKP8   A0A194R5R8   Q8T056   B4MS39   A0A1L8D8W7   A0A1L8D8W8   B3NNA8   B4QGN0   Q9W2B3   A9UNI3   A0A1B0CRR7   A0A0J9RIM1   B4P8C8   A0A1J1ISN3   A0A336MGI7  

Pubmed

26227816    22118469    26354079    21282665    20075255    21719571    + More
20798317    28648823    21347285    24508170    30249741    19121390    29403074    18362917    19820115    24845553    28004739    20566863    26823975    23537049    22516182    25244985    12364791    17510324    20966253    24438588    20920257    23761445    17994087    26108605    25315136    15632085    25401762    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17550304   

EMBL

NWSH01000345    PCG77242.1    GDQN01003568    JAT87486.1    JTDY01009879    KOB62385.1    + More
AGBW02012056    OWR45755.1    KQ459603    KPI92745.1    GL767051    EFZ14255.1    LBMM01001467    KMQ96270.1    KQ981820    KYN35148.1    KQ435793    KOX74210.1    KQ982254    KYQ58779.1    KQ981082    KYN09709.1    GL888465    EGI60527.1    GL435626    EFN72897.1    NNAY01003254    OXU19727.1    ADTU01012715    KQ976424    KYM88309.1    KK107578    QOIP01000002    EZA48678.1    RLU26100.1    BABH01005657    GL452770    EFN76877.1    KQ977600    KYN01481.1    KZ288203    PBC33385.1    GALX01002671    JAB65795.1    PYGN01000117    PSN53754.1    GBYB01004164    JAG73931.1    KQ414617    KOC68149.1    KQ971319    EFA00307.1    GBYB01012206    JAG81973.1    KK852846    KDR15115.1    GEZM01036366    JAV82761.1    DS235459    EEB15906.1    ACPB03006711    GDHC01015338    JAQ03291.1    GDHC01012129    JAQ06500.1    APGK01021647    APGK01021648    KB740350    KB632240    ENN80840.1    ERL90525.1    BT126447    AEE61411.1    GEDC01004337    JAS32961.1    LJIG01009650    KRT82656.1    AAAB01008986    EAA00082.3    CH477697    EAT37106.1    APCN01002370    AXCM01001386    ATLV01022359    KE525331    KFB47579.1    DS232066    EDS33715.1    GFDL01015224    JAV19821.1    JXJN01012518    AXCN02001076    CCAG010000365    GGFM01004622    MBW25373.1    GEZM01036365    JAV82762.1    GGFJ01003679    MBW52820.1    GGFK01009845    MBW43166.1    ADMH02001578    ETN61988.1    CH933808    EDW10032.2    JRES01000195    KNC33400.1    CH479183    EDW35901.1    CM000071    EDY69376.1    CH940648    EDW60938.2    KRF79678.1    GBHO01025971    JAG17633.1    CH902619    EDV37092.2    OUUW01000001    SPP75395.1    SPP75394.1    GBRD01001732    JAG64089.1    CP012524    ALC40969.1    CH916367    EDW00895.1    KQ460883    KPJ11211.1    AY069543    AAL39688.1    CH963850    EDW74928.1    GFDF01011182    JAV02902.1    GFDF01011181    JAV02903.1    CH954179    EDV55532.1    CM000362    EDX08149.1    AE013599    AAF46779.3    AHN56496.1    BT031347    ABY21760.1    AJWK01025161    AJWK01025162    AJWK01025163    AJWK01025164    CM002911    KMY95682.1    CM000158    EDW91168.2    CVRI01000059    CRL03243.1    UFQT01000928    SSX28039.1   

Proteomes

UP000218220    UP000037510    UP000007151    UP000053268    UP000036403    UP000078541    + More
UP000053105    UP000002358    UP000075809    UP000078492    UP000007755    UP000000311    UP000215335    UP000005205    UP000078540    UP000053097    UP000279307    UP000005204    UP000008237    UP000005203    UP000078542    UP000242457    UP000245037    UP000053825    UP000007266    UP000027135    UP000009046    UP000015103    UP000019118    UP000030742    UP000075903    UP000076408    UP000075885    UP000075900    UP000007062    UP000075920    UP000008820    UP000075881    UP000075882    UP000075840    UP000075883    UP000075884    UP000030765    UP000002320    UP000078200    UP000092443    UP000092460    UP000075886    UP000075880    UP000092444    UP000069272    UP000000673    UP000009192    UP000037069    UP000092445    UP000091820    UP000095301    UP000008744    UP000001819    UP000008792    UP000007801    UP000268350    UP000095300    UP000192221    UP000092553    UP000001070    UP000076407    UP000053240    UP000007798    UP000008711    UP000000304    UP000000803    UP000092461    UP000002282    UP000183832   

PRIDE

H9JLJ6    Q8T056    Q9W2B3   

Pfam

PF10192   GpcrRhopsn4

Interpro

IPR019336   Intimal_thickness-rel_rcpt       

ProteinModelPortal

A0A2A4K0S4   A0A1E1WKU2   A0A0L7KH00   A0A212EW85   A0A194PNP4   E9IYV6   + More
A0A0J7NV49   A0A195F3W2   A0A0M8ZZD2   K7J5W3   A0A151XEI9   A0A195DBB5   F4WZ24   E2A0J4   A0A232EN22   A0A158NDM3   A0A195BQS1   A0A026VY08   H9JLJ6   E2C5E4   A0A088A7T3   A0A195CL80   A0A2A3ENP2   V5G6T3   A0A2P8ZB79   A0A0C9QKU7   A0A0L7RBA6   D6WF04   A0A0C9RWM6   A0A067R9D2   A0A1Y1MAY0   E0VRA0   T1HIB3   A0A146L419   A0A146LJ77   N6UGF3   J3JT91   A0A1B6E4V9   A0A0T6B5I7   A0A182VHS0   A0A182YJE7   A0A182PC68   A0A182R4C4   Q7PZ34   A0A182WEG5   Q16RT5   A0A182KCM8   A0A182L4F3   A0A182HH04   A0A182LXD2   A0A182N2J7   A0A084WBI5   B0WS88   A0A1Q3EWX8   A0A1A9UF76   A0A1A9YC70   A0A1B0BDL9   A0A182QWI8   A0A182IXH0   A0A1B0FNJ1   A0A2M3ZA19   A0A1Y1MAA6   A0A182FTB1   A0A2M4BID5   A0A2M4AQV4   W5JF78   B4KNP7   A0A0L0CM85   A0A1A9Z2D3   A0A1A9X3E5   A0A1I8MZ13   B4GHD1   B5E0N1   B4LM60   A0A0Q9WF86   A0A0A9XFT5   B3MJ26   A0A3B0J2K0   A0A1I8PCS2   A0A3B0J219   A0A0K8TF19   A0A1W4UZY3   A0A0M3QUN4   B4J6C2   A0A182XKP8   A0A194R5R8   Q8T056   B4MS39   A0A1L8D8W7   A0A1L8D8W8   B3NNA8   B4QGN0   Q9W2B3   A9UNI3   A0A1B0CRR7   A0A0J9RIM1   B4P8C8   A0A1J1ISN3   A0A336MGI7  

KEGG

101742307    no KO assigned | (RefSeq) integral membrane protein GPR180

GO

GO:0007186   GO:0016021   GO:0019236   GO:0006810   GO:0005515   GO:0031032   GO:0030060   GO:0019752   GO:0016491   GO:0016295   GO:0016296  

SignalP

Position:   1 - 18,         Likelihood:  0.865433

 

 

Length:

437

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

136.75656

Exp number, first 60 AAs:

7.37603

Total prob of N-in:

0.39058

outside

1  -  222

TMhelix

223  -  245

inside

246  -  251

TMhelix

252  -  274

outside

275  -  295

TMhelix

296  -  315

inside

316  -  321

TMhelix

322  -  344

outside

345  -  358

TMhelix

359  -  378

inside

379  -  394

TMhelix

395  -  417

outside

418  -  437

 

 

Pi

166.434696

Theta

164.919143

Tajima's D

0.21307

CLR

0.02653

CSRT

0.432328383580821

Interpretation

Uncertain