Gene

KWMTBOMO07171  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010559

Annotation

PREDICTED:_carnitine_O-palmitoyltransferase_2?_mitochondrial_[Papilio_machaon]

Location

Bomo_Chr12(+):7060359-7069302      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.662

CDS

ATGTTATCTTTGAGAGAACATATTTTGGAACCAGAAGTTTATCATTTGAATGCGAAAAAGAGTGATACTCCGTTATTTAGAACAGTTACTGGATTATTACCTGAAGCTATCTCTTGGTATGGTGCATATTTATTCAAAGCATTTCCATTAGATATGAGTCAATTTGTTGGACTATTTGGAGCTACACGTTTACCTCAAATAGGTAAAGATAAATTATTCAGGGATCCTAAGAGCAAGCATGTTTTAGTCCAAAGAAGGGGAAGATTTTATGCATTTGATGTCTTAGATAAGGACGGCAACCTATTGTCTCCTGCTGAATTACTTGGAAACCTATCTAAAATTATTAGAGATGACACCGGTTCGGCTGAACATCCCCTAGGTTACTTGACCTGCCAAACTAGAGATTTGTGGGCGAAACAAAGAGCTCACCTTGAAGAAAATGGAAATAAACAAGCATTACATGTATTAGATACAGCTATATTCAACTTGATATTTGACGATGATGTTATAGAAGATGATAAAAATAAACTTCTGAAACATTATTTGTGTGGTAATGGAAATAACAGGTGGTTTGATAAATCATTCAGCTTAATTGTTACAAAGGATGGAGTGTCTGGGATAAATTTTGAACACTCTTGGGGAGATGGAGTAGCTGTGCTAAGGTTCTTCCAAGACATATACAATGAAACAACAACAAAACCTTTTGTACATCCAGATTCTCAACCATCAACCTCAAACATTACTGTTCAAGAACTACAATTCAACCTTGATGAAAAATCGAAGAAGTTTATTCAGGACGCAAAGCAAGAATATGATAACTGGTGTGACTCCTTGAGCATTGATTACATATTATATGAAGGCCTCACCAAAGGAGCTTGCAAGAAATTCAAAGTTAGCCCAGATTGTATAATGCAACTAGCTTTTCAAGCGGCATATCATCTGATAAAGGGTAAATTCGTTGGAACCTACGAGTCTTGCAGCACCTCTGCCTTTAAACATGGACGTACTGAAACAATGCGACCGTGCACCGAAAAAACTAAGGCATTCTGCGAAGCTTTAAATGTTCATAAAAAGTCGAAAGATGAACTTCGAGTAGCTATGGGCGAGTGTTCCGCCTATCACTCTGAGTTAGTAAAACAAGCTGCCATGGGCCAAGGCTTCGATAGACACTTGTTCGCTCTTATGAAGATCGCTGAAGAAAATGATATACCAAGACCAGAATTATTCGATTCATACGAATATAAGTTCCTAAACAAATCAATTCTTAGTACAAGTACTTTGTCGGCTCCCAGTGTAATGGCAGGTGGATTTGGACCAGTTGCACAGGAGGGATTCGGTATTGGGTACTCGGCTTTTCCTGATAAACTAGGTGCAGCTGTGAGCAGTTATAAAACGCACAATAGTAGTACCGAATTTGTGCAAGCTCTTCATACATCGTTTTTAGAAATCACAAGGATTTTGTCTGGATAG

Protein

MLSLREHILEPEVYHLNAKKSDTPLFRTVTGLLPEAISWYGAYLFKAFPLDMSQFVGLFGATRLPQIGKDKLFRDPKSKHVLVQRRGRFYAFDVLDKDGNLLSPAELLGNLSKIIRDDTGSAEHPLGYLTCQTRDLWAKQRAHLEENGNKQALHVLDTAIFNLIFDDDVIEDDKNKLLKHYLCGNGNNRWFDKSFSLIVTKDGVSGINFEHSWGDGVAVLRFFQDIYNETTTKPFVHPDSQPSTSNITVQELQFNLDEKSKKFIQDAKQEYDNWCDSLSIDYILYEGLTKGACKKFKVSPDCIMQLAFQAAYHLIKGKFVGTYESCSTSAFKHGRTETMRPCTEKTKAFCEALNVHKKSKDELRVAMGECSAYHSELVKQAAMGQGFDRHLFALMKIAEENDIPRPELFDSYEYKFLNKSILSTSTLSAPSVMAGGFGPVAQEGFGIGYSAFPDKLGAAVSSYKTHNSSTEFVQALHTSFLEITRILSG

Similarity

Belongs to the carnitine/choline acetyltransferase family.

Uniprot

H9JM07   A0A194R095   A0A194PI71   A0A291P163   A0A0P0ELC5   A0A1V0M8B1   + More
A0A291P115   A0A212FLS5   A0A088MD10   A0A3S2LRC0   A0A2A4JZK2   A0A2H1V5I8   A0A182MZ77   A0A182QK97   A0A182P8A9   A0A1Q3F3U5   A0A182JI10   A0A195CZQ6   A0A195EFA6   A0A182JUM5   A0A182M7Q6   A0A158NRT9   E9IY55   A0A195ERN7   F4WQR7   Q5TNJ3   A0A195BPY1   A0A182XNP7   A0A182GMS2   A0A151X3T5   A0A182LMU8   A0A182UI32   B0WRQ6   K7ITB3   A0A182I7A6   A0A2J7RSV9   A0A182VUD5   A0A182USB4   A0A026WCT2   A0A0J7L7M2   A0A182Y0B1   A0A0P4VNB7   Q171R6   U5ESD7   A0A0V0G6I2   A0A2J7RSV8   A0A023F332   A0A067R1Z9   A0A069DW47   A0A2M4BH49   A0A2M4AKL0   A0A0P6FS08   A0A2M3ZA45   A0A224XLP3   A0A0P4Y2B2   A0A0P5D6U6   A0A0P5CUQ9   A0A0N7ZVN9   A0A0P5F8U5   A0A154PGT5   A0A0P5WWA4   A0A0P5A4B6   A0A0P5FHS2   A0A0P5VC46   A0A182F2K0   E2AEF2   A0A0N7ZQQ0   A0A0K8TTB4   E9FY65   A0A232F9D9   A0A0N8C9K2   A0A1B6IBM3   W5JW02   V5G906   A0A0P5L5K3   A0A0P5VSP2   A0A0P5R985   N6U5K5   A0A1B6CFU1   A0A2R2MQ02   A0A0L7RB32   A0A093H524   A0A0K8THC3   A0A0C9RAR1   A0A1U9W5K6   A0A091EQP7   B4LE41   A0A0A9W8I4   R0JG34   A0A088A7X0   A0A1Y1MAA5   A0A093NWE3   A0A336MKE1   A0A2A3EP17   U3INM7   A0A226NAI1   A0A087RHS9   A0A226PRE9   J9JKJ9   A0A0P5IPE7  

Pubmed

19121390    26354079    28986331    26445454    28349297    22118469    + More
26385554    21347285    21282665    21719571    12364791    14747013    17210077    26483478    20966253    20075255    24508170    30249741    25244985    27129103    17510324    25474469    24845553    26334808    20798317    26369729    21292972    28648823    20920257    23761445    23537049    17994087    25401762    28004739    24621616   

EMBL

BABH01005653    KQ460883    KPJ11213.1    KQ459603    KPI92743.1    MF706177    + More
ATJ44604.1    KT261721    ALJ30261.1    KU755509    ARD71219.1    MF687650    ATJ44576.1    AGBW02007731    OWR54649.1    KJ579232    AIN34708.1    RSAL01000299    RVE42779.1    NWSH01000345    PCG77239.1    ODYU01000563    SOQ35534.1    AXCN02002069    GFDL01012820    JAV22225.1    KQ977041    KYN06143.1    KQ978983    KYN26841.1    AXCM01000345    ADTU01024307    GL766908    EFZ14502.1    KQ981993    KYN30888.1    GL888275    EGI63430.1    AAAB01008984    EAL38971.2    KQ976424    KYM88577.1    JXUM01075043    KQ562865    KXJ74976.1    KQ982562    KYQ54939.1    DS232058    EDS33460.1    AAZX01005891    APCN01003374    NEVH01000250    PNF43916.1    KK107274    QOIP01000008    EZA53748.1    RLU19713.1    LBMM01000373    KMQ98991.1    GDKW01002176    JAI54419.1    CH477447    EAT40751.1    GANO01002403    JAB57468.1    GECL01003090    JAP03034.1    PNF43912.1    GBBI01003064    JAC15648.1    KK852808    KDR16023.1    GBGD01000823    JAC88066.1    GGFJ01002987    MBW52128.1    GGFK01007999    MBW41320.1    GDIQ01046258    JAN48479.1    GGFM01004652    MBW25403.1    GFTR01007487    JAW08939.1    GDIP01237334    JAI86067.1    GDIP01164639    LRGB01002371    JAJ58763.1    KZS08048.1    GDIP01165268    JAJ58134.1    GDIP01208025    JAJ15377.1    GDIP01150387    JAJ73015.1    KQ434899    KZC11017.1    GDIP01081584    GDIP01070453    JAM22131.1    GDIP01204282    JAJ19120.1    GDIQ01254391    JAJ97333.1    GDIP01101729    JAM01986.1    GL438828    EFN68204.1    GDIP01221937    JAJ01465.1    GDAI01000205    JAI17398.1    GL732527    EFX87483.1    NNAY01000676    OXU27053.1    GDIQ01101443    JAL50283.1    GECU01023372    JAS84334.1    ADMH02000239    ETN67280.1    GALX01001842    GALX01001841    JAB66625.1    GDIQ01174656    JAK77069.1    GDIP01096942    JAM06773.1    GDIQ01110780    JAL40946.1    APGK01039173    KB740967    ENN76890.1    GEDC01025093    JAS12205.1    KQ414617    KOC68074.1    KL217220    KFV74520.1    GBRD01001286    JAG64535.1    GBYB01013559    GBYB01013560    JAG83326.1    JAG83327.1    KX892708    AQY19419.1    KK718817    KFO58614.1    CH940647    EDW70084.1    GBHO01038833    GBHO01038832    GBHO01038830    GBHO01038829    JAG04771.1    JAG04772.1    JAG04774.1    JAG04775.1    KB744139    EOA95911.1    GEZM01037797    JAV81928.1    KL224816    KFW64447.1    UFQS01001396    UFQT01001396    SSX10673.1    SSX30355.1    KZ288203    PBC33440.1    MCFN01000116    OXB64594.1    KL226373    KFM13033.1    AWGT02000029    OXB82090.1    ABLF02016211    ABLF02016213    GDIQ01209838    JAK41887.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007151    UP000283053    UP000218220    + More
UP000075884    UP000075886    UP000075885    UP000075880    UP000078542    UP000078492    UP000075881    UP000075883    UP000005205    UP000078541    UP000007755    UP000007062    UP000078540    UP000076407    UP000069940    UP000249989    UP000075809    UP000075882    UP000075902    UP000002320    UP000002358    UP000075840    UP000235965    UP000075920    UP000075903    UP000053097    UP000279307    UP000036403    UP000076408    UP000008820    UP000027135    UP000076858    UP000076502    UP000069272    UP000000311    UP000000305    UP000215335    UP000000673    UP000019118    UP000085678    UP000053825    UP000053875    UP000052976    UP000008792    UP000005203    UP000054081    UP000242457    UP000198323    UP000053286    UP000198419    UP000007819   

PRIDE

H9JM07   

Pfam

PF00755   Carn_acyltransf        + More
PF05485   THAP
PF08784   RPA_C

Interpro

IPR000542   Carn_acyl_trans        + More
IPR039551   Cho/carn_acyl_trans       
IPR042232   Cho/carn_acyl_trans_1       
IPR042231   Cho/carn_acyl_trans_2       
IPR023213   CAT-like_dom_sf       
IPR006612   THAP_Znf       
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       
IPR014892   RPA_C       
IPR012340   NA-bd_OB-fold       
IPR038441   THAP_Znf_sf       

SUPFAM

SSF46785   SSF46785        + More
SSF50249   SSF50249       

Gene 3D

3.30.559.40     3.30.559.70     3.30.559.10     1.10.10.10     3.30.40.180    

ProteinModelPortal

H9JM07   A0A194R095   A0A194PI71   A0A291P163   A0A0P0ELC5   A0A1V0M8B1   + More
A0A291P115   A0A212FLS5   A0A088MD10   A0A3S2LRC0   A0A2A4JZK2   A0A2H1V5I8   A0A182MZ77   A0A182QK97   A0A182P8A9   A0A1Q3F3U5   A0A182JI10   A0A195CZQ6   A0A195EFA6   A0A182JUM5   A0A182M7Q6   A0A158NRT9   E9IY55   A0A195ERN7   F4WQR7   Q5TNJ3   A0A195BPY1   A0A182XNP7   A0A182GMS2   A0A151X3T5   A0A182LMU8   A0A182UI32   B0WRQ6   K7ITB3   A0A182I7A6   A0A2J7RSV9   A0A182VUD5   A0A182USB4   A0A026WCT2   A0A0J7L7M2   A0A182Y0B1   A0A0P4VNB7   Q171R6   U5ESD7   A0A0V0G6I2   A0A2J7RSV8   A0A023F332   A0A067R1Z9   A0A069DW47   A0A2M4BH49   A0A2M4AKL0   A0A0P6FS08   A0A2M3ZA45   A0A224XLP3   A0A0P4Y2B2   A0A0P5D6U6   A0A0P5CUQ9   A0A0N7ZVN9   A0A0P5F8U5   A0A154PGT5   A0A0P5WWA4   A0A0P5A4B6   A0A0P5FHS2   A0A0P5VC46   A0A182F2K0   E2AEF2   A0A0N7ZQQ0   A0A0K8TTB4   E9FY65   A0A232F9D9   A0A0N8C9K2   A0A1B6IBM3   W5JW02   V5G906   A0A0P5L5K3   A0A0P5VSP2   A0A0P5R985   N6U5K5   A0A1B6CFU1   A0A2R2MQ02   A0A0L7RB32   A0A093H524   A0A0K8THC3   A0A0C9RAR1   A0A1U9W5K6   A0A091EQP7   B4LE41   A0A0A9W8I4   R0JG34   A0A088A7X0   A0A1Y1MAA5   A0A093NWE3   A0A336MKE1   A0A2A3EP17   U3INM7   A0A226NAI1   A0A087RHS9   A0A226PRE9   J9JKJ9   A0A0P5IPE7  

PDB

4EPH     E-value=9.17303e-127,     Score=1162

KEGG

101742025    K08766 carnitine O-palmitoyltransferase 2 [EC:2.3.1.21] | (RefSeq) carnitine O-palmitoyltransferase

PATHWAY

00071    Fatty acid degradation - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016746   GO:0006635   GO:0005739   GO:0004095   GO:0003677   GO:0070328   GO:0042594   GO:0046951   GO:0005975   GO:0016020   GO:0005515   GO:0031032   GO:0030060   GO:0019752   GO:0016491   GO:0016295   GO:0016296  

PANTHER

PTHR22589  

Length:

489

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.36922

Exp number, first 60 AAs:

0.35583

Total prob of N-in:

0.01694

outside

1  -  489

 

 

Pi

153.469424

Theta

126.858328

Tajima's D

-0.621571

CLR

137.885426

CSRT

0.210289485525724

Interpretation

Uncertain