Gene

KWMTBOMO07170

Pre Gene Modal

BGIBMGA010398

Annotation

PREDICTED:_4F2_cell-surface_antigen_heavy_chain-like_[Bombyx_mori]

Location

Bomo_Chr12(-):7052714-7056608      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.825

CDS

ATGGACAGCTTACCAGAGAACAGTACTAATGGTGGAAGTCAGTTAGAGACTTCTGATTATTTGCATGGTGTAAAATCTTCAACATGTTTGTTGCTCCCAACAACACCAAGTCCAACTACTTTGGATTTTCAGCATCCTTTATCTGAAGAACTTATTGAGCAGCCCTTCCTTACATTAAATGGAGATAATATTGATATTGCTGACACCCAAAATGATGCTACAGCAGGTGATTCAAGTTCTTCGGCAGATTCTAACTCAGTTGTCCAGGATCCAGTTAGTGCACAATTGATAAACAATATTAGTATGTTAGATTATCAAACACTGAGTAAGAATGGGGATCTTATTATTGGACAGGCAGAAGATGTTAAACTGAATGGGAATTTGAAAATTAATAATAGGAAACTGCCAAGCTTTGTGAACTGGAACTGGGTTGTTATACGAAAGATTTTACTGTGGGTAGTACTGTCTGGGCTCATTGCTTGTCTTGCAGCTATCATTGGTATGATAATAACTATTCCTAAAGAATGTAATATTGACCTACCATGGTATCAAGGAAAGGTTTTTTACGAAGTATTTCCTGCCAGTTTTAAAGATTCCAATAATGATGGCACAGGTGATTTTAAAGGCCTGATAACTAAACTTGATTATATACAAAATTTAGGTGTTGCTGCTATTCGACTTAATTATATATTTCAAGCTGATCATTATCCTGAAGATTACAATAATGTAACTTCTATGTTGGACATAGACAGGAGCTTAGGCGTACTTAAAGACTTACAGGATCTAATATTTAATATACATAAAAGGAACATGTCAGTCATACTTGATTTACCAGTAATTTCAATGGCTCTTCCAAGTCTCATTTTTAACTCCACTTCATCTATTATCATAGCAAATAATACTGAAGTTAACTATTTGGATCCAACAACTGTTGCTATAATTCATTGGTCTCAAGCACAAGGAGTTGATGGATTTTATTTAAAAAAATTGGAAAATTTTGTGAACGAACCATATTTTGGTAGAACTCTTCAGATTTGGAAACAAATTATAGGATTCAATAAAATTTTGATTGCGAGCGAATTGGCTTATAGTAAAGCTACAGGTGATGCTTTGAATATTCTTTTGTCAAGAATTGATCTCATAGATGTTCACATAGATTTAGAAGAAGAAACTGCTGGTATTTGTGATAAAATCAAGAAGGTTGTGGATGGACAATTATGGTCTAAGCCTCATTATCCTTGGGTACATTGGAATATTGGTAATGTGAACAGTGAAAGAATAGCGACAAAACATATTAATAATACTTTAGCTTTGACAGTTTTAGAATTCGTTCTTCCAGGAACTGTAAGTATATTCTACGGAGATGAGATAGGATTGGGCGGTATACCAGATGATGTTGAAGAAGATTTCCATGAACACAAAGATATTCATAACTTAGTCCAAATGGCTTTTGCTGATAGTGAGGTGACCCCTACTAATGTTGAAATTCTACCATGGAACCTAAAGTCTGTACTAAAGCCAAATTATGATTTTCTTAATGTCATTAAAAACTTGATTAAGGTAAGAGTGACTACTCCTACAATTTACTTAAGAGCAATTTTCAAGGAGGGCGTTATGCAACCTAATGTAGAAATACGTCAAACGGAAGAAGATTTGATTGTGATTGAGCGTTGGTACCCTCGTAGAAATGCCTGCGTTTTTGTCGGTAATCTAGGCAGTAAGACTATAACAGCCGATTTATCTACAATGTTCTATGGTGGGAAAGTTATTGCTGGCACTAATTCTTCATTAATTGGTCAAGTATTGTATTTTGAGAAAGTGACTTTCTCGCCCAATTCAGCAATAATAGTTAAAATGGAGAAATAA

Protein

MDSLPENSTNGGSQLETSDYLHGVKSSTCLLLPTTPSPTTLDFQHPLSEELIEQPFLTLNGDNIDIADTQNDATAGDSSSSADSNSVVQDPVSAQLINNISMLDYQTLSKNGDLIIGQAEDVKLNGNLKINNRKLPSFVNWNWVVIRKILLWVVLSGLIACLAAIIGMIITIPKECNIDLPWYQGKVFYEVFPASFKDSNNDGTGDFKGLITKLDYIQNLGVAAIRLNYIFQADHYPEDYNNVTSMLDIDRSLGVLKDLQDLIFNIHKRNMSVILDLPVISMALPSLIFNSTSSIIIANNTEVNYLDPTTVAIIHWSQAQGVDGFYLKKLENFVNEPYFGRTLQIWKQIIGFNKILIASELAYSKATGDALNILLSRIDLIDVHIDLEEETAGICDKIKKVVDGQLWSKPHYPWVHWNIGNVNSERIATKHINNTLALTVLEFVLPGTVSIFYGDEIGLGGIPDDVEEDFHEHKDIHNLVQMAFADSEVTPTNVEILPWNLKSVLKPNYDFLNVIKNLIKVRVTTPTIYLRAIFKEGVMQPNVEIRQTEEDLIVIERWYPRRNACVFVGNLGSKTITADLSTMFYGGKVIAGTNSSLIGQVLYFEKVTFSPNSAIIVKMEK

Uniprot

A0A2H1V3W4   A0A2A4JZY3   A0A0L7LA37   A0A212FLL9   A0A194R124   A0A194PHF4   + More
A0A1S4FJN7   Q16YM2   Q5TND7   A0A182KUL1   A0A182WYQ4   A0A023EVE8   A0A182I519   A0A182VIA3   A0A182SHS9   A0A182R9L7   A0A182QGC4   A0A084WBX7   U5EPQ3   A0A182K387   A0A182UC15   A0A182YFC1   A0A182NEZ8   A0A1B0CUJ4   A0A026VUK7   A0A0J7KHP8   A0A1I8M964   A0A182F5E2   T1PA19   W5JLN1   A0A182ITW5   A0A182WH20   B0W1I2   A0A195CMH7   A0A1Y1NH85   A0A158N9F8   A0A182MWR0   A0A151HZR7   A0A151JV08   A0A0L7RFU7   A0A088AAX5   A0A034WD52   A0A0K8VPR1   E2BFJ4   A0A0L0CBK5   A0A151WGR5   A0A0K8UEC7   A0A195E1E7   A0A0A1X050   A0A182NZV7   D6X352   A0A2A3EE62   A0A232F8F5   K7IWH6   A0A1Q3FM05   E2AMD2   A0A1I8PT10   E9IW30   A0A1I8PSW7   W8AVH0   A0A1A9W5C9   A0A0M9A678   A0A1W4XB62   A0A1B0FG52   A0A1B0A4R5   A0A1A9V2A0   A0A1B6H479   A0A0K8U294   E0VNW9   A0A067R5T3   A0A1B0ANZ1   A0A1A9XVU9   A0A2J7PKA0   A0A2J7PK94   A0A2J7PK91   A0A069DZF0   A0A1B6CHZ3   A0A023F646   A0A0V0G6M3   A0A0P4W495   T1HSS6   A0A154PE16   A0A0C9Q0L8   A0A0C9RLQ3   A0A0C9RGD8   A0A336M3K7   A0A1B0D366   A0A1W7R8J0   A0A2R7W383   A0A336KU16   A0A1B6MBZ4   A0A3Q0IYL9   A0A0Q9WHK9   A0A0Q9XJJ1   A0A0M3QTN2   A0A0P5X0U7   A0A0P5YPG8  

Pubmed

26227816    22118469    26354079    17510324    12364791    14747013    + More
17210077    20966253    24945155    24438588    25244985    24508170    30249741    25315136    20920257    23761445    28004739    21347285    25348373    20798317    26108605    25830018    18362917    19820115    28648823    20075255    21282665    24495485    20566863    24845553    26334808    25474469    27129103    17994087    18057021   

EMBL

ODYU01000563    SOQ35535.1    NWSH01000345    PCG77238.1    JTDY01002044    KOB72250.1    + More
AGBW02007731    OWR54648.1    KQ460883    KPJ11214.1    KQ459603    KPI92742.1    CH477514    EAT39713.1    AAAB01008984    EAL39050.2    GAPW01000490    JAC13108.1    APCN01003748    AXCN02000838    ATLV01022515    KE525333    KFB47721.1    GANO01003626    JAB56245.1    AJWK01029249    KK107928    QOIP01000001    EZA47171.1    RLU26514.1    LBMM01007389    KMQ89777.1    KA645582    AFP60211.1    ADMH02000797    ETN65031.1    DS231822    EDS25780.1    KQ977565    KYN01923.1    GEZM01005656    JAV96005.1    ADTU01009632    AXCM01001497    KQ976712    KYM76973.1    KQ981713    KYN37379.1    KQ414601    KOC69720.1    GAKP01006716    GAKP01006715    JAC52237.1    GDHF01011754    JAI40560.1    GL448037    EFN85516.1    JRES01000648    KNC29610.1    KQ983152    KYQ47021.1    GDHF01027287    JAI25027.1    KQ979814    KYN18975.1    GBXI01010264    JAD04028.1    KQ971372    EFA09799.1    KZ288267    PBC30073.1    NNAY01000694    OXU26945.1    GFDL01006483    JAV28562.1    GL440811    EFN65423.1    GL766449    EFZ15201.1    GAMC01016273    GAMC01016271    JAB90282.1    KQ435742    KOX76753.1    CCAG010013157    GECZ01000278    JAS69491.1    GDHF01031450    JAI20864.1    DS235354    EEB15075.1    KK852723    KDR17684.1    JXJN01001085    NEVH01024940    PNF16755.1    PNF16754.1    PNF16753.1    GBGD01000755    JAC88134.1    GEDC01024305    GEDC01013378    JAS12993.1    JAS23920.1    GBBI01002030    JAC16682.1    GECL01003042    JAP03082.1    GDKW01000436    JAI56159.1    ACPB03004812    KQ434886    KZC10081.1    GBYB01007418    JAG77185.1    GBYB01009205    JAG78972.1    GBYB01007415    JAG77182.1    UFQS01000502    UFQT01000502    SSX04461.1    SSX24825.1    AJVK01023317    AJVK01023318    GEHC01000202    JAV47443.1    KK854262    PTY13888.1    SSX04460.1    SSX24824.1    GEBQ01006524    JAT33453.1    CH940649    KRF81687.1    KRF81688.1    CH933807    KRG03827.1    CP012523    ALC39179.1    GDIP01086498    GDIP01079243    JAM24472.1    GDIP01056293    JAM47422.1   

Proteomes

UP000218220    UP000037510    UP000007151    UP000053240    UP000053268    UP000008820    + More
UP000007062    UP000075882    UP000076407    UP000075840    UP000075903    UP000075901    UP000075900    UP000075886    UP000030765    UP000075881    UP000075902    UP000076408    UP000075884    UP000092461    UP000053097    UP000279307    UP000036403    UP000095301    UP000069272    UP000000673    UP000075880    UP000075920    UP000002320    UP000078542    UP000005205    UP000075883    UP000078540    UP000078541    UP000053825    UP000005203    UP000008237    UP000037069    UP000075809    UP000078492    UP000075885    UP000007266    UP000242457    UP000215335    UP000002358    UP000000311    UP000095300    UP000091820    UP000053105    UP000192223    UP000092444    UP000092445    UP000078200    UP000009046    UP000027135    UP000092460    UP000092443    UP000235965    UP000015103    UP000076502    UP000092462    UP000079169    UP000008792    UP000009192    UP000092553   

Pfam

PF00128   Alpha-amylase

Interpro

IPR017853   Glycoside_hydrolase_SF        + More
IPR006047   Glyco_hydro_13_cat_dom       

SUPFAM

SSF51445   SSF51445       

ProteinModelPortal

A0A2H1V3W4   A0A2A4JZY3   A0A0L7LA37   A0A212FLL9   A0A194R124   A0A194PHF4   + More
A0A1S4FJN7   Q16YM2   Q5TND7   A0A182KUL1   A0A182WYQ4   A0A023EVE8   A0A182I519   A0A182VIA3   A0A182SHS9   A0A182R9L7   A0A182QGC4   A0A084WBX7   U5EPQ3   A0A182K387   A0A182UC15   A0A182YFC1   A0A182NEZ8   A0A1B0CUJ4   A0A026VUK7   A0A0J7KHP8   A0A1I8M964   A0A182F5E2   T1PA19   W5JLN1   A0A182ITW5   A0A182WH20   B0W1I2   A0A195CMH7   A0A1Y1NH85   A0A158N9F8   A0A182MWR0   A0A151HZR7   A0A151JV08   A0A0L7RFU7   A0A088AAX5   A0A034WD52   A0A0K8VPR1   E2BFJ4   A0A0L0CBK5   A0A151WGR5   A0A0K8UEC7   A0A195E1E7   A0A0A1X050   A0A182NZV7   D6X352   A0A2A3EE62   A0A232F8F5   K7IWH6   A0A1Q3FM05   E2AMD2   A0A1I8PT10   E9IW30   A0A1I8PSW7   W8AVH0   A0A1A9W5C9   A0A0M9A678   A0A1W4XB62   A0A1B0FG52   A0A1B0A4R5   A0A1A9V2A0   A0A1B6H479   A0A0K8U294   E0VNW9   A0A067R5T3   A0A1B0ANZ1   A0A1A9XVU9   A0A2J7PKA0   A0A2J7PK94   A0A2J7PK91   A0A069DZF0   A0A1B6CHZ3   A0A023F646   A0A0V0G6M3   A0A0P4W495   T1HSS6   A0A154PE16   A0A0C9Q0L8   A0A0C9RLQ3   A0A0C9RGD8   A0A336M3K7   A0A1B0D366   A0A1W7R8J0   A0A2R7W383   A0A336KU16   A0A1B6MBZ4   A0A3Q0IYL9   A0A0Q9WHK9   A0A0Q9XJJ1   A0A0M3QTN2   A0A0P5X0U7   A0A0P5YPG8  

PDB

4GIN     E-value=3.74491e-16,     Score=209

KEGG

101741728    no KO assigned | (RefSeq) 4F2 cell-surface antigen heavy chain-like

GO

GO:0016021   GO:0005975   GO:0003824   GO:0004558   GO:0032450   GO:0016020   GO:0005515   GO:0031032   GO:0030060   GO:0019752   GO:0016491   GO:0016295   GO:0016296  

Length:

621

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

24.33504

Exp number, first 60 AAs:

0.00087

Total prob of N-in:

0.99326

inside

1  -  149

TMhelix

150  -  172

outside

173  -  621

 

 

Pi

246.556718

Theta

225.894184

Tajima's D

0.621969

CLR

0

CSRT

0.550972451377431

Interpretation

Uncertain