Silkworm Genome Informatics Database

Gene

KWMTBOMO07169

Pre Gene Modal

BGIBMGA010558

Annotation

PREDICTED:_protein_expanded_[Bombyx_mori]

Location

Bomo_Chr12(+):7035099-7050438 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.047

CDS

ATGCGCGCTCTGTGTTCGGTTCGCGGGCCGTTAGGCGGAGACACTCGCGCTCTAGGCGCGGGTGCTCGGTTTCTGTCCCTCCGCATGCCCGGTCAAGCACAGCCTCTTCACTTCGTTGTGGAAGCAAAATCAAGAGTCAAAGAGTTAAAAGCATTGGTCAACGGACATGTCCAGCTACGAGGCATGACCGATACGGATTTTTTCGGATTAGCTGTATTACAAAACGGCGAGTATTTGTTTGTTGATTTGGAGAGCAAATTGTCGAAGTACGCACCAAAGAGTTGGAGATCATCACACACTCATGGATTAGATGCAAATGGAAAACCTCTCCTGGAATTGCATTTTATCGTCCAATTCCACGTGGAAAGTCCATTACTATTACATGATGAAGTTGGACGCCGTTTGTACTTCTTACAATTACGTCACAATATTCGAACCAGAGACGCTATACCTGCGGAGATGGTGCTTTTGCTTTCTGGCTTGGCATTACAAGCAGAGTATGGAGACGCAGACGCCTACGATAATCATGATTACTTCAAAGTTGAAGAATACGCACCTGCGTCGCTTACAGGAGACTGGGTGGCTGCGGCAATGCGCGCTTGCCATCGTGAGCACCACGGCTTATCAAAAACAGAAGCAGAGACGAGATTTATACGTGAAGTTTGTTTGTTACCGGACACGCTAAATTCGCACCGATACCGCTTAAAACAAAGTAAATCAGAACCAGAACCCGGAACCGTTTGGTTACTCGTTACAGCAAAAGGCATAAAAATCTTACCAGATAACGGAACGCTGTCAGATTTTATTTGGAGTGCTATAGGAAAACTCAGTTTTGATCGAAAGAAGTTCGAGATTAGAACGGACGACGGCAAAATAACTTTGTACTCGTCGAGCGAAGAAAAGTGTAAATACCTTTTCGCTTTATGTAAGGAAACCCATCAGTTTTCAATGAAAATAGCACCAAGATTCAGTGAGATTTTAAGAAAAGAGGAGGAAGAACGTAAACTTTGTTTTGGCTATTCAAAATCTTTTAACTCTCGGTACAACCAAAACAAAAGTGAGCAGAGAATATCGGTCATCTCTTCAACGAGTTCCAACACAACATCAGGTATTGTCAGTGACAGAGTGCAATCCGAAGATGAATTAGAAATTATGATCGACTCCCCTCCGGCACCTTCTACGGAAAGTTTGGCTATTGCTCATTTGTTAGACAGCTCGAATTCGTACGTTATCAGTCAATCAACTCAAGAAAATATATCTAATAGCTTATCACCTTTTCATTTTCAAAAATCGAGATTCAAATCAAAACGCACAAAGGAAGAATGTGACAATACTTTAAAAAATGAAACCTTCAATCCGGAAGCAGTACAACATTCGATAAATCAGATGGATGAAACGACTTCTTTGCCTGATCAAAGCGTTGTCGAAAGCGACAGTCCGACTTCAAGCAAATTAAAATGTACTGGATCGCAATGCTCATCATCATGCAGTACAGTTATAATGACTAGGACGGGTCTAAGTACTCTAAGTAGAACATCAAACGCGAGCAGCTTAGAATTAGGATACAGTCATACGGCTCAAAATTCAATGATCAGTGATAATAGCACAGGTGGTATAGACTTAGAATACTCCCAAGATACCGCTTCAGCATTATATGATGGGTTAGGTCAACCGGCAACCATAGCTGCTTCTAGTGAAACAAGCGGTGTTTATACAATGACTAGTTCAGAATTAACAACTAGATTAAAAATAGATGCAATGTCAGAAGATAGCCGAACAGATTACGATGAATCTCATTATGATTGTTATAAGCAAGCAAAAGAGAATGATCTTGCAGAGTTTGACAGCATTTCGTCTATTCTTAAAAATAAAGCAAAAACACTGAATCACGTAACGAATAGATTACAAGTGCCAAGTTCCGATTGCGTTGATGGTTCATCGAAGTATGCAAATCAGGATCACGATAAAGAAAACATTATACTTTTTAGAGAACGAACAAACTCCAACGTAAGTGCTAGTTCGTTCCATGGAGACGGAAGTGACCCAACAGATAATAAGCATAACTTATTAACAGCTAGTGAATTAAGTGATTTGATTGTTGGAAGGGGTGTTTATCCTAAAAAACAATCAGTGAGTGACACTCTGGATTCCGTATCCGATTATGTAAGGCTTCCTTTACCTTTCTCTGGGGACAGTTATCTCCCGGGTCATGAAGACACTGCCCCTTGCGATGACAACTACCCCAACAATCAATTTTTCGACCGACCTCCGACTCCTCCGACTAGAATAGACAGCCGTAAACTGCTCAATTTGTCTTTACCAAATATATTAGACATAAATCTGGATACGTTTAATAAGCCCAGTTTTCCTCAAAAACCGCCACCGCCGTATGAATTTAACCACAGAACAGTTCCATCACAAATAAAAACGCCGTTAAAAGACCCTCCTGCGTATCCTGGATGCTCATTGAGTACATTGAGTACATCCTTGACGCATTTGTCAGATAAAGAAGAAGTATCTGCAAGGATGGTCACGTCCAAACCAATGATTACTATACTGAAAGCAGAAGCAGGAGAAGTGAATACACCCTGTGAAAGAACTTTCGCTAGTCCCATGGTGCTGGAACATAGATTTCAAAAATCAAAAAGACATCAGGCTTCAAGTCGTAGAGCCGAAAGATCAAAATTAGCTCAAGGAATAAGTAATCTATCTCCATCAAGAGAAGTCCCTCCACCCCTTGGAGTTGATTCAAACGTGTTTGTAGCGATGATGAAGTTACCTCCACCTCCGCCCCCACCAAGACGATCTAGGCTTCCACCACCTCCACCAGTCACTAGAATACCTCCTCCACCTCCCCCACATAATCCTATTTTTCATCAACAGCTGTACAGCGACGTCGATTACGTTTATTACCCTCTACAAGATCCAGCAATTTCTCAACAAAATTATCTTGATCACAAACTAACAGAATCCAGACTGACAAATATGCAAAAAAACAGTTTGCAATACAGAAGCACGCCGTACTTATCAACATCTTTGTCTGCATCGTCCGTATACGGCTCAATACAAAACCTTTCGGATTCTTATATCCAACTTCCGGGAACGCGTGCGAGCTGGTATTCATTAACGAGCAAAACAACTCTCAGCAATCATTCCATCAATGTGGATAGGCCGCATATGCCGCCATGTTTCGTAGATTTTTCACGACCTAAACCTGACGAAAAGGTTCTCATAAAAGAACCACCACCGGTGAAAATGAGGAGAATGCCACCGCCGCCGCCGCCACCCTACGAGCACAAGAAAAAACTGCCACCACTAAAAGAACCGAAACAACCACACGGCAGTGCAAATGTGAAAAGTGAATTTAGTGCTAATAAATTACACGCTAATAACTGTGATTTGGACATTAAAACGCTTAGGGAAAAAAGCAAAAACCTAGACTTACCTCTTATAGCGGCATTGTGTAATGACCGCTCTTTACTCAAACAAACTAAAGCTTTTGGTGCTCCAAAGTTATCGAAACAAACATGTACTGATTATGACAGTGAACGTGCAAAGTCCGCTCCCAACACCACCGATAACGTAGATATAAGAAATAAACAAGAAATCAATGTCAAAAGAGTTGCAGGGTCGCAGAAAAAGATTTTGTTAAGAAATCCTACAGACAAACTTCCCGCATTACCAGGGTCGGAAGTGCATACACCTAGAGCCATGTCTAACACGTACGTTGTGCACCCCGCAGTAGTAAAAAATAAAAAAATTCAACCAAACTCATGA

Protein

MRALCSVRGPLGGDTRALGAGARFLSLRMPGQAQPLHFVVEAKSRVKELKALVNGHVQLRGMTDTDFFGLAVLQNGEYLFVDLESKLSKYAPKSWRSSHTHGLDANGKPLLELHFIVQFHVESPLLLHDEVGRRLYFLQLRHNIRTRDAIPAEMVLLLSGLALQAEYGDADAYDNHDYFKVEEYAPASLTGDWVAAAMRACHREHHGLSKTEAETRFIREVCLLPDTLNSHRYRLKQSKSEPEPGTVWLLVTAKGIKILPDNGTLSDFIWSAIGKLSFDRKKFEIRTDDGKITLYSSSEEKCKYLFALCKETHQFSMKIAPRFSEILRKEEEERKLCFGYSKSFNSRYNQNKSEQRISVISSTSSNTTSGIVSDRVQSEDELEIMIDSPPAPSTESLAIAHLLDSSNSYVISQSTQENISNSLSPFHFQKSRFKSKRTKEECDNTLKNETFNPEAVQHSINQMDETTSLPDQSVVESDSPTSSKLKCTGSQCSSSCSTVIMTRTGLSTLSRTSNASSLELGYSHTAQNSMISDNSTGGIDLEYSQDTASALYDGLGQPATIAASSETSGVYTMTSSELTTRLKIDAMSEDSRTDYDESHYDCYKQAKENDLAEFDSISSILKNKAKTLNHVTNRLQVPSSDCVDGSSKYANQDHDKENIILFRERTNSNVSASSFHGDGSDPTDNKHNLLTASELSDLIVGRGVYPKKQSVSDTLDSVSDYVRLPLPFSGDSYLPGHEDTAPCDDNYPNNQFFDRPPTPPTRIDSRKLLNLSLPNILDINLDTFNKPSFPQKPPPPYEFNHRTVPSQIKTPLKDPPAYPGCSLSTLSTSLTHLSDKEEVSARMVTSKPMITILKAEAGEVNTPCERTFASPMVLEHRFQKSKRHQASSRRAERSKLAQGISNLSPSREVPPPLGVDSNVFVAMMKLPPPPPPPRRSRLPPPPPVTRIPPPPPPHNPIFHQQLYSDVDYVYYPLQDPAISQQNYLDHKLTESRLTNMQKNSLQYRSTPYLSTSLSASSVYGSIQNLSDSYIQLPGTRASWYSLTSKTTLSNHSINVDRPHMPPCFVDFSRPKPDEKVLIKEPPPVKMRRMPPPPPPPYEHKKKLPPLKEPKQPHGSANVKSEFSANKLHANNCDLDIKTLREKSKNLDLPLIAALCNDRSLLKQTKAFGAPKLSKQTCTDYDSERAKSAPNTTDNVDIRNKQEINVKRVAGSQKKILLRNPTDKLPALPGSEVHTPRAMSNTYVVHPAVVKNKKIQPNS

Uniprot

A0A2H1V434 A0A2A4JYZ8 A0A3S2LAX0 H9JM06 A0A212FLP0 A0A194PH60 + More
A0A0L7L9S6 A0A194R1T8 A0A336N915 A0A336M3J0 A0A1L8DMG3 A0A1L8DMG2 A0A1L8DMP7 A0A182R9L8 Q7PW08 A0A182NEZ7

Pubmed

19121390 22118469 26354079 26227816 12364791

EMBL

ODYU01000563 SOQ35536.1 NWSH01000345 PCG77237.1 RSAL01000299 RVE42781.1 + More
BABH01005650 BABH01005651 AGBW02007731 OWR54647.1 KQ459603 KPI92741.1 JTDY01002044 KOB72248.1 KQ460883 KPJ11215.1 UFQS01003750 UFQT01003750 SSX15905.1 SSX35248.1 UFQT01000502 SSX24826.1 GFDF01006435 JAV07649.1 GFDF01006436 JAV07648.1 GFDF01006437 JAV07647.1 AAAB01008984 EAA14701.4

Proteomes

UP000218220 UP000283053 UP000005204 UP000007151 UP000053268 UP000037510 + More
UP000053240 UP000075900 UP000007062 UP000075884

PRIDE

H9JM06

Pfam

PF09380 FERM_C + More
PF00373 FERM_M

Interpro

IPR019749   Band_41_domain        + More
IPR014352   FERM/acyl-CoA-bd_prot_sf
IPR035963   FERM_2
IPR011993   PH-like_dom_sf
IPR019748   FERM_central
IPR000299   FERM_domain
IPR018980   FERM_PH-like_C
IPR041781   FRMD6-FERM_C
IPR029071   Ubiquitin-like_domsf

SUPFAM

SSF47031 SSF47031 + More
SSF54236 SSF54236

Gene 3D

1.20.80.10 2.30.29.30

CDD

cd13185 FERM_C_FRMD1_FRMD6
cd14473 FERM_B-lobe

ProteinModelPortal

A0A2H1V434 A0A2A4JYZ8 A0A3S2LAX0 H9JM06 A0A212FLP0 A0A194PH60 + More
A0A0L7L9S6 A0A194R1T8 A0A336N915 A0A336M3J0 A0A1L8DMG3 A0A1L8DMG2 A0A1L8DMP7 A0A182R9L8 Q7PW08 A0A182NEZ7

PDB

3U8Z E-value=1.02505e-11, Score=174

KEGG

101744950 K16683 protein expanded | (RefSeq) protein expanded

PATHWAY

04391 Hippo signaling pathway - fly - Bombyx mori (domestic silkworm)
04392 Hippo signaling pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0005856 GO:0016887 GO:0016020 GO:0005515 GO:0031032 GO:0030060 GO:0019752 GO:0016491 GO:0016295 GO:0016296

Length:

1258

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00522999999999999

Exp number, first 60 AAs:

0.00128

Total prob of N-in:

0.00026

outside

1 - 1258

Pi

26.762489

Theta

184.26819

Tajima's D

-1.693464

CLR

235.398547

CSRT

0.0394980250987451

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics