SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07166
Annotation
hypothetical_protein_ANCDUO_06765?_partial_[Ancylostoma_duodenale]
Location in the cell
PlasmaMembrane   Reliability : 2.509
 

Sequence

CDS
ATGGAAAAATTCACCAAAACGACGATATATGGAGTTCACTTCCGCGACAGACTACTCTACCGCCAATACATAACCTCGAAGACACATAAATATGGCATAAAGATCTATAAGCTATACTCTGCAGAAGGTTACACTTGGGGATACCAAAACAGTGGTCAAAGTGTGCAAGTTTTTGGTTTGGATACCTCCGGATGTATGGTAGTAACATTGGCAGAAGGTCTAATTGATGAAGGTCGCTGCATGATAACTGACAACTACTATACGAGCGTCCCTTTGGCAGAATTTTTGCTTTCTCGCACAGTCAATAAAAAGAGAAGAAGCTTACCGAAAAATGTGATGGATTATAAAGTGGCGATCGGTGAGATTGTTGTGAAACAAAAGAATGAAAATGCAGTACTGAAATGGAGGAACAAAATAGATGTTTGTACATTGTCCACTTGCCACGGTAAAGAAATGTCTTCTACAACAGACTTACTATCGATGGCTGTAGTGAACTCTACGATTATATATAACGAGATGCACCTTGGAAGGAGAGAAAAGCTGAGCATTCTAGCAGCACATGGAACCATTGTAAAAAAGCTCTTACACGAACTTGCACACCAACCCAGGGAAATACGCTTTTTCAGCGCAGGAAGAACACCGCAGTTATATACAAGGTCATCAAGACCATTTTGGTTATTTCAGTTATCCTTCAGTTATCAGGACCAGGTCCTGGTTACCAGGGCCATCATCAGGAAGACTTTCTTCTAG
Protein
MEKFTKTTIYGVHFRDRLLYRQYITSKTHKYGIKIYKLYSAEGYTWGYQNSGQSVQVFGLDTSGCMVVTLAEGLIDEGRCMITDNYYTSVPLAEFLLSRTVNKKRRSLPKNVMDYKVAIGEIVVKQKNENAVLKWRNKIDVCTLSTCHGKEMSSTTDLLSMAVVNSTIIYNEMHLGRREKLSILAAHGTIVKKLLHELAHQPREIRFFSAGRTPQLYTRSSRPFWLFQLSFSYQDQVLVTRAIIRKTFF

Summary

Pfam
PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2
Interpro
IPR029526   PGBD        + More
IPR032718   PGBD4_C_Znf-ribbon       

Ontologies

GO

Topology

Length:
249
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07903
Exp number, first 60 AAs:
0.01506
Total prob of N-in:
0.22940
outside
1  -  249
 
 

Population Genetic Test Statistics

Pi
69.425974
Theta
151.340271
Tajima's D
-1.326988
CLR
22.994423
CSRT
0.0872956352182391
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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