Gene

KWMTBOMO07165

Pre Gene Modal

BGIBMGA010556

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_[Papilio_xuthus]

Location

Bomo_Chr12(+):6944709-6987117      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.979

CDS

ATGTTTCGGCGGAAATCCTGCTACATATTTCAAGATGATAAACTTATTGAAACGTTGACTATTAAGGAATCACTTACGATAGCAGCGGAACTGAAACTTGGAAATCATATCAGTGCGAGTCAAAAACGACAACGCGTAGAACAAATAATAATGTCTCTTGGGCTGTACGCAGTGGAGAATACTAAAGCCGGGAACCTATCAGGCGGACAAAAAAAAAGACTAACAATAGGTCTGGAACTAGTCAGCGATCCGCCCGTTATGTTCCTCGATGAACCAACAAGTGGACTAGATATTTCGGTAGCAAAAAAATTAGTCAATTTACTTCACCTGTTAGCACGGCAAGGACGAACGATGGTGATAACTATGCATCAACCTTCACTCAGTCTACTTCAGATGGTGGACAGGCTATACGCAGTCGTTGCAGGAAAGTGTGCTTATATGGGCTCCGTGCCTCTGCTACTGCCATATTTAAACCAATTGAACCTACCAGACTTAAGGTGCTTGTCGTATCATGACCCTGTTGAATATTTAATAGAAATCAGTGGGACCTATGAAGAAAAATTAGTAGAAAAGTCTAAAAATGGAAGTAACAATTGTTGGGTTACTGAAGCGACTGATAGTCCAATTCTAGAAAGACCGAAACTACTTAGAATTACTTCAACAAATGAGGAAATTAGTTTAACACTATTAACAGCTCCCAAAGAGAATTCGACAAATAAAATTATTTTGGCCCTGAAAAGCACATACTCTACCTCATTTTGGAAACAATTCATCACATTGACAAGAAGATCTGTATTAAGTACGTGGCGAGAACCTTCATTTACGTTAACATTCATAAGTATTCACGGATTCATGGCATTGTTTATTGGCATCCTATTCAAGAATGTTGGCGAAGACGTCGAAAAAGTCAGAGATAACTACAACTTTCTGTACTTCAGTCTGATGTTCCTTATGTTCAACGCATTTAGTGCCGTCTCAATCAGATTTCCGGAACAAATCCCCGTTACCCGAAGAGAACATTTCAACCGTTGGTATACGACAGGCGCTTTCTACGCGTCAACTTTACTCTCTACGCTACCCATACAGACCGTGTGCACCCTTCTATACTCAATTCTCGTATATTGGATGACAGGACAATCTCCGAATTTAATTCGATTTACAATATTCAATTTCACTTTGCTGTTAGTCTCATACGTATCACTATGTATGGGTCTCCTTAATGGATCAATATTTAACGTAAAGAATGGAGTTATATTTGGTCCGCTAATGATTATGCCGTTCACTATATTCTCCGGGTTCTTCTTGCGTTACCGCGATGCGCCGTATTTCTTCCGCTGGATGTTTCAAATATCATTCTTGAAACACGGACTCGTTGGACTCGTGCTCTCCGTCTTCGGTATGGGCCGGTCTAACTTCAGCTGCCCAAAAATATTCTGTTACTACACTTACCCTACGCAGTTATTAATAGACAACCACATGGACAAAGAAGAATTTACATTAGCGATTGGAGCACTTTTCGCTATCAGCTTCGCATTGATTGCGACTTCTTTCGTGATCCTCAAAATTAGACTGAAGAGTAAATGGTGA

Protein

MFRRKSCYIFQDDKLIETLTIKESLTIAAELKLGNHISASQKRQRVEQIIMSLGLYAVENTKAGNLSGGQKKRLTIGLELVSDPPVMFLDEPTSGLDISVAKKLVNLLHLLARQGRTMVITMHQPSLSLLQMVDRLYAVVAGKCAYMGSVPLLLPYLNQLNLPDLRCLSYHDPVEYLIEISGTYEEKLVEKSKNGSNNCWVTEATDSPILERPKLLRITSTNEEISLTLLTAPKENSTNKIILALKSTYSTSFWKQFITLTRRSVLSTWREPSFTLTFISIHGFMALFIGILFKNVGEDVEKVRDNYNFLYFSLMFLMFNAFSAVSIRFPEQIPVTRREHFNRWYTTGAFYASTLLSTLPIQTVCTLLYSILVYWMTGQSPNLIRFTIFNFTLLLVSYVSLCMGLLNGSIFNVKNGVIFGPLMIMPFTIFSGFFLRYRDAPYFFRWMFQISFLKHGLVGLVLSVFGMGRSNFSCPKIFCYYTYPTQLLIDNHMDKEEFTLAIGALFAISFALIATSFVILKIRLKSKW

Uniprot

A0A194R0A1   A0A2A4K0D4   A0A3S2P675   A0A194PI62   A0A2H1V3X0   A0A1E1WQ41   + More
K7IMI8   A0A1L8E4V1   A0A2M4BIK8   D2A233   A0A2M4BHN6   A0A182MW61   A0A2M4BGS2   A0A2M4BGY9   A0A182S4M3   A0A2A3ET89   A0A0U9HU30   A0A088A0P1   A0A182KBU9   A0A2M4BEZ2   A0A0C9RBC3   A0A182XFM6   A0A1S4H158   A0A2M4AF23   A0A1Y9GLI2   A0A182Q8Q3   E2BE50   A0A1S4H221   A0A1S4H1Z0   A0A1S4H226   A0A232FLJ7   A0A182VHC8   A0A2M4AMD6   A0A182JLA7   A0A0L7QX62   A0A0N0BL17   A0A182GYV8   V5GU74   B0X144   A0A084VPQ0   Q16Y88   W5J4Y2   A0A026WG29   A0A1Q3FJ30   A0A1Q3FIP9   A0A087ZKJ5   A0A2M4CZ66   U5EUW9   A0A182YMF1   A0A1W4X6U4   U4UDC0   N6TU97   A0A1W4XHI2   A0A154NZ61   A0A3R5SLE9   A0A2P8Y9C3   A0A182VUV2   A0A151WW34   E2A2I6   A0A3Q0J6W2   A0A3Q0J1V8   A0A1Y1NBY8   U5ETU1   A0A182P7E7   A0A3L8DF84   A0A0K8U8N1   F4WD70   A0A146KSC3   A0A158P165   A0A1Y1KDU5   A0A023F9W8   D2A232   A0A1B0GJ00   V5GHI9   E0W387   A0A2J7RCU0   A0A067QV98   A0A146M2T0   A0A2J7PQ37   A0A067QKG8   A0A0A9Y4U0   A0A0C9S320   E2A2I4   A0A151WWP2   E9IZD6   D1ZZE5   E0W3T6   K7IQL0   E9IZD3   A0A0C9RP34   A0A158P0V0   A0A1J1IRZ3   A0A2Z5UB45   H9J6F2   A0A1B6CQQ0   A0A151JZF0   A0A151IVA2   A0A195AUJ8   A0A1S4EBY9  

Pubmed

26354079    20075255    18362917    19820115    12364791    20798317    + More
28648823    26483478    24438588    17510324    20920257    24508170    25244985    23537049    29403074    28004739    30249741    21719571    26823975    21347285    25474469    20566863    24845553    25401762    21282665    19121390   

EMBL

KQ460883    KPJ11218.1    NWSH01000345    PCG77233.1    RSAL01000299    RVE42784.1    + More
KQ459603    KPI92738.1    ODYU01000563    SOQ35538.1    GDQN01002103    JAT88951.1    GFDF01000522    JAV13562.1    GGFJ01003749    MBW52890.1    KQ971338    EFA01493.1    GGFJ01003411    MBW52552.1    AXCM01001117    GGFJ01003109    MBW52250.1    GGFJ01003122    MBW52263.1    KZ288191    PBC34512.1    GARF01000012    JAC88925.1    GGFJ01002473    MBW51614.1    GBYB01004176    JAG73943.1    AAAB01008839    GGFK01006001    MBW39322.1    APCN01004583    AXCN02000853    GL447755    EFN86037.1    NNAY01000050    OXU31535.1    GGFK01008457    MBW41778.1    KQ414705    KOC63207.1    KQ435687    KOX81384.1    JXUM01021309    JXUM01021310    KQ560597    KXJ81700.1    GALX01000747    JAB67719.1    DS232252    EDS38493.1    ATLV01015022    KE524999    KFB39944.1    CH477522    EAT39580.1    ADMH02002133    ETN58463.1    KK107235    EZA54898.1    GFDL01007466    JAV27579.1    GFDL01007606    JAV27439.1    GGFL01006446    MBW70624.1    GANO01002142    JAB57729.1    KB632081    ERL88591.1    APGK01052119    APGK01052120    APGK01052121    APGK01052122    APGK01052123    APGK01052124    KB741209    ENN72850.1    KQ434783    KZC04862.1    MH172510    QAA95917.1    PYGN01000782    PSN40866.1    KQ982691    KYQ52093.1    GL436038    EFN72389.1    GEZM01007026    JAV95472.1    GANO01002631    JAB57240.1    QOIP01000009    RLU19117.1    GDHF01029292    GDHF01014089    JAI23022.1    JAI38225.1    GL888084    EGI67878.1    GDHC01019236    JAP99392.1    ADTU01005828    GEZM01087692    JAV58531.1    GBBI01000426    JAC18286.1    EFA02729.1    AJWK01017948    AJWK01017949    AJWK01017950    GALX01004992    JAB63474.1    DS235882    EEB20093.1    NEVH01005883    PNF38654.1    KK853336    KDR08337.1    GDHC01004531    GDHC01001750    JAQ14098.1    JAQ16879.1    NEVH01022640    PNF18457.1    KK853235    KDR09575.1    GBHO01016416    GBHO01016415    GBHO01016413    GBHO01016411    GBRD01006668    GBRD01006666    JAG27188.1    JAG27189.1    JAG27191.1    JAG27193.1    JAG59153.1    GBYB01015296    JAG85063.1    EFN72387.1    KYQ52091.1    GL767121    EFZ14046.1    EFA01863.2    DS235883    EEB20292.1    EFZ14056.1    GBYB01015295    GBYB01015297    JAG85062.1    JAG85064.1    ADTU01005818    ADTU01005819    ADTU01005820    CVRI01000057    CRL02482.1    LC322265    BBB02488.1    BABH01019639    BABH01019640    GEDC01021537    JAS15761.1    KQ981414    KYN41883.1    KQ980916    KYN11448.1    KQ976738    KYM75695.1   

Proteomes

UP000053240    UP000218220    UP000283053    UP000053268    UP000002358    UP000007266    + More
UP000075883    UP000075900    UP000242457    UP000005203    UP000075881    UP000076407    UP000075840    UP000075886    UP000008237    UP000215335    UP000075903    UP000075880    UP000053825    UP000053105    UP000069940    UP000249989    UP000002320    UP000030765    UP000008820    UP000000673    UP000053097    UP000076408    UP000192223    UP000030742    UP000019118    UP000076502    UP000245037    UP000075920    UP000075809    UP000000311    UP000079169    UP000075885    UP000279307    UP000007755    UP000005205    UP000092461    UP000009046    UP000235965    UP000027135    UP000183832    UP000005204    UP000078541    UP000078492    UP000078540   

PRIDE

H9J6F2   

Pfam

PF01061   ABC2_membrane        + More
PF00005   ABC_tran

Interpro

IPR027417   P-loop_NTPase        + More
IPR017871   ABC_transporter_CS       
IPR003439   ABC_transporter-like       
IPR013525   ABC_2_trans       
IPR003593   AAA+_ATPase       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A194R0A1   A0A2A4K0D4   A0A3S2P675   A0A194PI62   A0A2H1V3X0   A0A1E1WQ41   + More
K7IMI8   A0A1L8E4V1   A0A2M4BIK8   D2A233   A0A2M4BHN6   A0A182MW61   A0A2M4BGS2   A0A2M4BGY9   A0A182S4M3   A0A2A3ET89   A0A0U9HU30   A0A088A0P1   A0A182KBU9   A0A2M4BEZ2   A0A0C9RBC3   A0A182XFM6   A0A1S4H158   A0A2M4AF23   A0A1Y9GLI2   A0A182Q8Q3   E2BE50   A0A1S4H221   A0A1S4H1Z0   A0A1S4H226   A0A232FLJ7   A0A182VHC8   A0A2M4AMD6   A0A182JLA7   A0A0L7QX62   A0A0N0BL17   A0A182GYV8   V5GU74   B0X144   A0A084VPQ0   Q16Y88   W5J4Y2   A0A026WG29   A0A1Q3FJ30   A0A1Q3FIP9   A0A087ZKJ5   A0A2M4CZ66   U5EUW9   A0A182YMF1   A0A1W4X6U4   U4UDC0   N6TU97   A0A1W4XHI2   A0A154NZ61   A0A3R5SLE9   A0A2P8Y9C3   A0A182VUV2   A0A151WW34   E2A2I6   A0A3Q0J6W2   A0A3Q0J1V8   A0A1Y1NBY8   U5ETU1   A0A182P7E7   A0A3L8DF84   A0A0K8U8N1   F4WD70   A0A146KSC3   A0A158P165   A0A1Y1KDU5   A0A023F9W8   D2A232   A0A1B0GJ00   V5GHI9   E0W387   A0A2J7RCU0   A0A067QV98   A0A146M2T0   A0A2J7PQ37   A0A067QKG8   A0A0A9Y4U0   A0A0C9S320   E2A2I4   A0A151WWP2   E9IZD6   D1ZZE5   E0W3T6   K7IQL0   E9IZD3   A0A0C9RP34   A0A158P0V0   A0A1J1IRZ3   A0A2Z5UB45   H9J6F2   A0A1B6CQQ0   A0A151JZF0   A0A151IVA2   A0A195AUJ8   A0A1S4EBY9  

PDB

6FFC     E-value=2.24728e-47,     Score=478

KEGG

101741217    K05680 ATP-binding cassette, subfamily G (WHITE), member 4 | (RefSeq) ATP-binding cassette sub-famil

PATHWAY

02010    ABC transporters - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0016887   GO:0005524   GO:0016020   GO:0055085   GO:0005886   GO:0042626   GO:0005739   GO:0015416   GO:0005515   GO:0031032   GO:0030060   GO:0019752   GO:0016491   GO:0016295   GO:0016296  

Length:

528

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

158.05786

Exp number, first 60 AAs:

0.00226

Total prob of N-in:

0.25237

outside

1  -  273

TMhelix

274  -  296

inside

297  -  308

TMhelix

309  -  331

outside

332  -  350

TMhelix

351  -  373

inside

374  -  385

TMhelix

386  -  408

outside

409  -  417

TMhelix

418  -  435

inside

436  -  441

TMhelix

442  -  464

outside

465  -  497

TMhelix

498  -  520

inside

521  -  528

 

 

Pi

196.510925

Theta

160.402783

Tajima's D

-0.975648

CLR

118.795115

CSRT

0.142592870356482

Interpretation

Uncertain