Gene
KWMTBOMO07159
Pre Gene Modal
BGIBMGA001112
Annotation
reverse_transcriptase_[Danaus_plexippus]
Location in the cell
Nuclear Reliability : 1.538
Sequence
CDS
ATGATGGCCAATTGTTTAAAGTTAATACCCCAGGAGGGTACCACCCGCGAGTCGGGCGGAGAATGTGCTTCCACCTCGGTGGAAGCACGCTGCCCCACGTACTCTGGGGGGGGCAACAATTGCCACGATGAAGGAGGCTGTGCGACGGGCAGCGGAATTCCCGTCGAACCGAGGCACTCCCCGATCGCCGGCTCGATGCGCTCTGCGCTCGCCAGCGACTCGGGTGTGATCAACCCTATCAGACTATCGATGGGGAAAAAGAGGGGACGAAGGAAGACCCCACTACCAACGTCCGACGACGGCGGCGCGTCATCCTCCAGCACCGAGGTGCCGGAAAAGACGATGACAATCGAGGAGGTGGCTCCAGTGGTTGCGGGGCCTGCCGCAACGAAAGACGCGATGCCCGCTCCCCAGTGGGCACCAGTAAGGAGGAGGGGCGCAGTGTCACCGGCGACGTCAGTGGAGTCGATGTCGACGTCGGCCGCGTCCCTGGCTAGCGGGGACGAGGCATTCCGCGACCTCAACCTTGCGCTGGTCAATCTGGCTAAGCTGCTGTCGACCGTGGCTACCAAGGGCGCCGAGCCAGGCAGCAGCTACGGGAAGAGGCTCCGGGAGGGAGCCGCTATGGTTAGAACTAAGCTGATTCCCACTATGACCAAACTCGTAGCGCAGCTTGACTTCAGGGAGAGTCGCAGTCTGGGGGACTCCCCGGCTTTGCAAGAGGGAACTCCCCTGTCACCGATGCCTAGGCTGGCACGCTCTGAGCCGCCTGTGAGGAAGATGGACACCAGCGTGCCCTCGCGGGCCGTGATGAGTGTGGCGGCGCCCATGCCAGCGCCCACTTCTGTGGCCGCTGTTCTGCGAGTGCCTACTCCCGCGCTCCCTCGCCCCCCTCGCAGGGTTGAGTTAAGGCCTGCGCCGCCTCCCCGGATATCGGAATCCATACAGACAGGACGGTTAAGGCCTGTGCCAGCGCAGGCTGAGGACATTCGTTCGCCACTGGCGAGGATGGTAGACGAGTGGCCGGCGCTGCCGCGGCCTAGGCCTGCGGAGCCGCCTCTTTCACCCCCACGTGCTGTGGGGTCGCAGAGGGAGGAGGGGGAGGTGCATCACGTCCCAAGCAGAGCGGAAATGATGGCCTGCATCTCGCGGGCGGTGGCGGTTGAAGTCGGCAAACACTTTGCTGGCCTCGAGGAGATGCTCCGCTCCTCGATTAGTTTCAGAAATTGCGTCCCGGTGCCAACAGCCGCGACCGCCCCACGCGACCAGGCTGCCCAGCCGACCTTAACTTGTACCCCACCCGGGAGGGTGGCACGACGTGGAGGCCGGAACCGGAATAACAGAGGTGCGGATGCCCAGAATCCCGCCCCGCAATCCCAACCACAGCCCCGTCCCCTTCCTCCTCCCCCGTCAAGCATGGACGAGGGCTGGACGGAAGTGGTGAAGCGGGGCACCAAAACATGGCGACAAACAGCAGCTCTGGCAGCTCCTCGAGGGGATCGAGTGCCGACTGCTGTAGCACGAAACACAGCGCTGGCGGCCGTGGCTGCTCCCCGCGAGGGTCGAGCACCGGCCGCTAGCAAGACGAAAAACAAAAAGAAGAAGCCGCGCGCAGCGGGGTCGGCTGCCGTTGTAGTGACGTTGCTGCCGGCCGCCGCCGAAAAGGGCCTCACCTATAATGAGGTTATGGCCCGGGCGCGCGCGGCCGTAAATTTGAAAGAAATTGGAGCAGAGGAGGAGGGCCTCCGCTTCCGGCAGACCGCCAATGGGGCGAAGCTACTGGAGTGTCCCGGTGCCGATAGTTCTGGCATCGCGGATAGACTAGTGGCGACGCTCCGCGTGGCGTTGCCGGAGGAAGAGGTGCGCGTGCACAGGCCGGTGAGGATGGCAGAGATTAGGATCACCGGCCTGGATGACTGCGCCACCAAGGAGGAGGTGGCAGCCGCGATAGCCGCTCAGGGGGGATGTGCCCCGGAGAGCGTGACCGTCGGTGAACTTCGCTTAGGGTATTCCGGGGCCAGGTCGGCGTGGGCGCGCTGCCCTGTGGAGGCAGCCACTTCCTTGGCCACTCCTCCACCGGGAAAATCGGCGGGGGATCCGGGGAGACTGCGCGTGGGCTGGATAGCGGCCCACGTGCGTCTCCAAGAACCACGTGCCTGGCGATGCCACCGATGCTTTAGCACGGGGCACGGCCTCGCTAGGTGCACCAGCTCGGTTGACCGCAGCGGTTTGTGTTTCCGCTGCGGCCAGCCGGGCCATAAAGCGGCGTCCTGCACGGCTGACCCACATTGCGCTTTGTGCGCTGCAGCCGGACGCAGGGCAAACCACCGGGCGGGAGGCAAGGCGTGTTTCCCGTCCGGTAATAATACCGAACGCAACCGGCGCCGGAAATCAAGGCGCCGGCAAAAGAGAAGGTTGGCCAGAGGAGCACTGGCCGACGCTGTAATCCCCGCTGCGGCGCCGGCGCCGGAGGGCGGGGGCAGCGGAAACCTGAACCGCTCCGCCAGAGCTCAGGACATGCTGTCTCAGAGCATGGCGGAGCGGTCCATAGATGTGGCTGTGGTCGCCGAGCCGTACTTCGTTCCCCCAGCAAATGATTGTTGGTTTGGGGACGACGGCGGCCTGGCGGCCATAGTCATACGAAGAGACGCGGCGATCCCCCCCCTGGCGATGGTGACAAGGGGTCAAGGGTTCGTCGCGTTGCAGCTGGAAGGGACCGTCGTGATCGGGGCGTACTTCTCTCCGAACAGGCCTACCGTCGAGTTCGGGCATTTCCTGGGCGAGATCGGGGCGATTGCTCGCCGCCTCGCTCCTCGTCCAGTGATTCTCGCGGGGGACCTCAATGCGAAGTCTATCGCATGGGGCTCCCCCCGCTCGGACGCTCGTGGTAGGCTACTGGAGAGGTGGGCGAACGCGGCCGGCCTCTGTTTGTTGAATAGAGGGTCGGTTGCGACGTGCGTGCGGTGGCAGGGCGAGTCTATTGTGGACGTTACGTTCGCGAGCCCGGCCATCGCGCGCCGTATCCGCGACTGGAGGGTTTTGGAGGGGGCGGAGACGTTGTCAGATCACCGATATATTCGGTTTGATCTCTCCGCCCGCTCCGCAGTCGCGGACGCCCTCGGGGACCACCCCCGTGGTGCGTCCCGGTCATTCCCCAAGTGGGCACTGAAGCGCCTGAATAAGGAGCTCCTGATGGAAGCCTCTACAGTGGCGGCGTGGGCGCCCATGCGTCCACACCCGGTCGAGGTCGAGGGCGAGGCAGGGTGGTTTCGGGACACGATGCGTCGCATCTGTGATGTGTCGATGCCCCGGATCGGCCCTCGACTTCCTAATCGCCAGGCGTACTGGTGGTCGCCCGAAATTGCGCAACTCCGCGTGGAGTGCGTTCGGGCGAGGCGCGAGTGCGCCAGGCATCGCCGCCGCCGCCTGCCGCGGCGCAACGATCCAGTTGCGTTCGCGGCGGCAGAGGCCCGGCTGCACGCCGCATTTCGCGTCGCACAGAGGGCACTGCAGCTGGCCATCAGAAGAGCCAAGGATCAACACATGGAGGGTCTCCTGGAGACGCTGGATGAGGATCCGTGGGGGCGGCCCTATCATATGGTGCGCAATAAAATGCGCCCATGGGCCCCCCCGATCACGGAGCGTCTCCAGCCTCAGCAGCTGCGGGACATCGTCTCGGCGCTGTTCCCGCAGGAGCGGGAGGGATTTGTCGCGCCCGCTATGGACTCGCCGCCGGAATACGACGGCGAAGTCCCTGCCGAGGTGCCCCATATAACGGGGGCGGAGCTCCGTGTGGCCGTGCGCAAAATGTGCGCGAAGGACACTGCACCCAGCCCGGACGGTGTCCATGGCCGGGTTTGGGCCTTGGCTCTTGGTGCCCTGGGGGACCGACTCTTGAGGCTTTACAACTCCTGCCTCGAGTCGGGACGGTTTCCTTCATCGTGGAGGACGGGCAGACTAGTGCTGTTGAGAAAGGAGGGGCGCCCGGCGGATACTGCTGCCGGGTACCGTCCCATCGTGTTGCTGGATGAGGTGGGCAAGCTGCTGGAACGCATTCTGGCAGCCCGCATCATCCAGCATCTGGTCAGGGTGGGACCCGATCTGTCGGCGGAGCAATATGGCTTCCGAGAGGGCCGCTCAACGGTAGACGCGATCCTTCGCGTGCGGGCCCTCTCGGATGAGGCCGTTTCCGGGGGTGGGGTGGCTTTGGCGGTGTCACTCGATATCGCCAATGCGTTCAACACCCTGCCCTGGTCCGTGATAGGGGGGGCGCTGGAACGACACGGAGTGCCCCCCTACCTTCGCCGGCTGGTGGGTTCCTACTTGGAAGACAGATCGGTCACGTGTACCGGACACGGTGGGATCGTGCACCGGTTCCCGGTCGTGCGCGGTGTTCCACAGGGGTCGGTGCTCGGCCCTCTTTTGTGGAATATCGGGTATGACTGGGTGCTGAGGGGTGCCCTCCTCCCGGGCCTGAGCGTAATCTGTTACGCAGACGACACGTTGGTCGTGGCCCGGGGGGGGAGTTTTGCTGAGTCTGCTACGGCTGGGGTGGCGCATGTCGTCGGCAAAATCAGGAGATTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCATGTGGTTCCACAGGCCCCGGAGAGTGCCACCTGTCGATGCCCATATCGTGGTTGGAGGCGTCCGTATCGGGGTCGGGGTGCAGTTGAAGTACCTCGGCCTCATTCTAGACAGTCGTTGGACCTTCCGTGCTCACTTTCAGAATCTGGTCCCTCGTTTGTTGGGGGTGGCCGGCGCGTTAAGCCGGCTCCTTCTCAATGTTGGGGGGCCTGACCAGGTGACGCGCCGTCTCTATACAGGGGTGGTGCGATCAATGGCCCTATACGGGGCGCCCGTGTGGGGCCAGTCCCTGGCCGTGGGGGTAGCGAAGCTGCTGCAACGGCCGCAACGCACCATCGCGGTCAGGGTCATCCGTGGTTATCGCACCATCTCTTTCGAGGCGGCGTGTGTACTGGCTGGGACGCCGCCTTGGGTCCTGGAGGCGGAGGCGCTCGCTGCTGACTATCAGTGGCGGGCTGACCTTCGTGTACGGGGCGTGGCGCGTCCCAGCCCCAGTGTGGTCAGAGCGCGGAGGGCCCAATCTCGGCGGTCCGTACTGGAGTCATGGTCTAGACGGCTGGCCGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCGCCCGGTTCTTGTGAACTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATGGTTGCTTCGGTGAGTTCCTGCACCGGATCGGAGCCGAGCCGACGGCAGAGTGCCACCATTGTGGTTGCGACTTGGACACGGCGGAGCACACGCTCGTCGCCTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTCGTCGCAAAAATAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCGATGCTCGGTGACGACGAGTCGTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTGAGAGACGCACAGGCCCGCCGCCGTCGAGCGGGGGCCAGGGAGGCGGATATCGCCCAAGCCCTGGCCCTCTAA
Protein
MMANCLKLIPQEGTTRESGGECASTSVEARCPTYSGGGNNCHDEGGCATGSGIPVEPRHSPIAGSMRSALASDSGVINPIRLSMGKKRGRRKTPLPTSDDGGASSSSTEVPEKTMTIEEVAPVVAGPAATKDAMPAPQWAPVRRRGAVSPATSVESMSTSAASLASGDEAFRDLNLALVNLAKLLSTVATKGAEPGSSYGKRLREGAAMVRTKLIPTMTKLVAQLDFRESRSLGDSPALQEGTPLSPMPRLARSEPPVRKMDTSVPSRAVMSVAAPMPAPTSVAAVLRVPTPALPRPPRRVELRPAPPPRISESIQTGRLRPVPAQAEDIRSPLARMVDEWPALPRPRPAEPPLSPPRAVGSQREEGEVHHVPSRAEMMACISRAVAVEVGKHFAGLEEMLRSSISFRNCVPVPTAATAPRDQAAQPTLTCTPPGRVARRGGRNRNNRGADAQNPAPQSQPQPRPLPPPPSSMDEGWTEVVKRGTKTWRQTAALAAPRGDRVPTAVARNTALAAVAAPREGRAPAASKTKNKKKKPRAAGSAAVVVTLLPAAAEKGLTYNEVMARARAAVNLKEIGAEEEGLRFRQTANGAKLLECPGADSSGIADRLVATLRVALPEEEVRVHRPVRMAEIRITGLDDCATKEEVAAAIAAQGGCAPESVTVGELRLGYSGARSAWARCPVEAATSLATPPPGKSAGDPGRLRVGWIAAHVRLQEPRAWRCHRCFSTGHGLARCTSSVDRSGLCFRCGQPGHKAASCTADPHCALCAAAGRRANHRAGGKACFPSGNNTERNRRRKSRRRQKRRLARGALADAVIPAAAPAPEGGGSGNLNRSARAQDMLSQSMAERSIDVAVVAEPYFVPPANDCWFGDDGGLAAIVIRRDAAIPPLAMVTRGQGFVALQLEGTVVIGAYFSPNRPTVEFGHFLGEIGAIARRLAPRPVILAGDLNAKSIAWGSPRSDARGRLLERWANAAGLCLLNRGSVATCVRWQGESIVDVTFASPAIARRIRDWRVLEGAETLSDHRYIRFDLSARSAVADALGDHPRGASRSFPKWALKRLNKELLMEASTVAAWAPMRPHPVEVEGEAGWFRDTMRRICDVSMPRIGPRLPNRQAYWWSPEIAQLRVECVRARRECARHRRRRLPRRNDPVAFAAAEARLHAAFRVAQRALQLAIRRAKDQHMEGLLETLDEDPWGRPYHMVRNKMRPWAPPITERLQPQQLRDIVSALFPQEREGFVAPAMDSPPEYDGEVPAEVPHITGAELRVAVRKMCAKDTAPSPDGVHGRVWALALGALGDRLLRLYNSCLESGRFPSSWRTGRLVLLRKEGRPADTAAGYRPIVLLDEVGKLLERILAARIIQHLVRVGPDLSAEQYGFREGRSTVDAILRVRALSDEAVSGGGVALAVSLDIANAFNTLPWSVIGGALERHGVPPYLRRLVGSYLEDRSVTCTGHGGIVHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLSVICYADDTLVVARGGSFAESATAGVAHVVGKIRRLGLDVALSKSEAMWFHRPRRVPPVDAHIVVGGVRIGVGVQLKYLGLILDSRWTFRAHFQNLVPRLLGVAGALSRLLLNVGGPDQVTRRLYTGVVRSMALYGAPVWGQSLAVGVAKLLQRPQRTIAVRVIRGYRTISFEAACVLAGTPPWVLEAEALAADYQWRADLRVRGVARPSPSVVRARRAQSRRSVLESWSRRLADPSAGRRTVEAIRPVLVNWVNRDRGRLTFRLTQVLTGHGCFGEFLHRIGAEPTAECHHCGCDLDTAEHTLVACPAWEGWRRVLVAKIGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRVRDAQARRRRAGAREADIAQALAL
Summary
Uniprot
ProteinModelPortal
PDB
1WDU
E-value=1.01662e-11,
Score=175
Ontologies
GO
Topology
Length:
1876
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.24113
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00047
outside
1 - 1876
Population Genetic Test Statistics
Pi
10.443122
Theta
1.360933
Tajima's D
0
CLR
0.370682
CSRT
0.420178991050447
Interpretation
Uncertain
