Gene

KWMTBOMO07143

Pre Gene Modal

BGIBMGA010404

Annotation

PREDICTED:_mitochondrial_sodium/hydrogen_exchanger_9B2-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr12(-):6306338-6316646      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.973

CDS

ATGAAACAACCACGCCCCAGCCTCATTCAGTTTATTGGCAAACGTTGCACTGTAAGTTTCAGTTGTAGATCTCGATTTGATACATATTATAATGATCCAGTACTTACTTCGTTCTTGAACACGATTACCTACCACTGCTCAGCAGACAAAATACAGTCCGAAGAGCATTCTATAAGATGCGATTTTTCACAGGAAAGTGACGAGGACTACGGTAATTTGAATAAAGAAAAAATGGAAGATTCAAGGGAACCAGGTGCTCGTGTTTATACGTTCATAGATGACAACGACGAACGCAGAGATGAAATATACTATGATAAATGGTGGCAGAAATTTTGTTTGCGTTTTCATCAACCGGACTCGACACCCTCCTGGAAACCTAAGTGGTGGACGCGGTTTTTCCCGTTTCCTTTATTCTCAACGTACAGGCAATCAGCTCTGAAAATTTGCTTTATCTTATTCTTTCTTTTAACATGGGGAATACTTTATGCCGAACTTGGCGAAGCAATAGGTCTTCATGGTGAACTTCTCGGAATGAGTTTATTAGTCATAGCAGCGTACTTAATAGGTTGGATTTGGCTCAAAGTCACTACGTTACCGGCCCTGATTGGCATGTTACTGACCGGAATACTTTTCCAAAATTTCGGACTCGTAACTATGACTGATGAATACAGAAAGTTAAATCAAGATCTAAGAAAGCTAGCACTGGTAATTATTCTTACAAGGGCGGGTCTAGGATTAGATGCTAAAGTGTTAAAAAAACATTATGCTGCGGTATTACAGCTCGGCTTATTGCCGTGGCTCGTTGAATGCATAGCTATAGCCGTAACAACACATTACCTACTACATTTACCTTGGATATGGGCTTTCCTATTAGGTTCTATGATAGCTTCAGTGTCCCCAGCTGTGGTTGTACCTTGTTTGTTTAGATTACGCGACATAGGTTACGGTGAATCCAAAGGAATACCGACTATGGTAGTAGCTGCGGCAGCAATCGATGACTCCGTGAGCGTGGCTGTATTTGCTATAATATTGAATGCAATGTTTTCATCGGGGTCAGTAACTTGGAATATAATTAAGGGTCCACTGTCTATCATAGCTGGAGTTGCATTAGGGTCGCTATGGGGGGCACTGATCTCGTTCATACCAGAGAGTGGGGACACTCACGTTGTACCTTTGAGATTTCTACTTTTATTTTTAGGGGGATTATTCTCATTGTTTATATCAAGTATGATCGAATGGAGTGGAGCAGGTCCATTAGCAATAGTTTCATCTGGGTTTGTGGCCGCATATTACTGGAAGAAACAAGGTTGGATAGTCAATAAAAATCCAGTCAGTGATTTATTCAGAATATTATGGATATTTTTCGAACCAATATTATTTGCCTTTACTGGAGCTCAAGTCACAATAAGCACTTTAGATCCTGTTGTGATTAAGATGGGAGCGGTATGCCTTGTATCGTGCTTGCTAATTCGCGCCGTTGCCACTTTTCTTGTCAGCTTCGGCTGTGGTCTTAATTATAAAGAAAAACTGTTTATTAGTTTAACTTGGATGGCTAAAGCTACAGTGCAGGCCGCATTGGGTCCAGCCGCGCTGGATTTGGTTCACAGAAGTCAAACAACTGGTGAAAGTAATAAGCGAGAGGTTTACGCTGAAACGCTTCTCGCAGTCAGTGTGCTGAGCGTGATGTTGTCAGCGCCGTTAGGAGCACTACTTATCGCCGTAACTGGACCGAAACTACTGACTCGTGATAACGGTGATAATAAAGTACAAAGTGAAGTAGAATCAATGAAACCAGTGGCTCACAATTCATCTCAGCTCTGA

Protein

MKQPRPSLIQFIGKRCTVSFSCRSRFDTYYNDPVLTSFLNTITYHCSADKIQSEEHSIRCDFSQESDEDYGNLNKEKMEDSREPGARVYTFIDDNDERRDEIYYDKWWQKFCLRFHQPDSTPSWKPKWWTRFFPFPLFSTYRQSALKICFILFFLLTWGILYAELGEAIGLHGELLGMSLLVIAAYLIGWIWLKVTTLPALIGMLLTGILFQNFGLVTMTDEYRKLNQDLRKLALVIILTRAGLGLDAKVLKKHYAAVLQLGLLPWLVECIAIAVTTHYLLHLPWIWAFLLGSMIASVSPAVVVPCLFRLRDIGYGESKGIPTMVVAAAAIDDSVSVAVFAIILNAMFSSGSVTWNIIKGPLSIIAGVALGSLWGALISFIPESGDTHVVPLRFLLLFLGGLFSLFISSMIEWSGAGPLAIVSSGFVAAYYWKKQGWIVNKNPVSDLFRILWIFFEPILFAFTGAQVTISTLDPVVIKMGAVCLVSCLLIRAVATFLVSFGCGLNYKEKLFISLTWMAKATVQAALGPAALDLVHRSQTTGESNKREVYAETLLAVSVLSVMLSAPLGALLIAVTGPKLLTRDNGDNKVQSEVESMKPVAHNSSQL

Uniprot

A0A2H1VLY0   A0A0L7KVC7   A0A194R0K4   A0A2A4JX14   A0A212FGB7   A0A194PJ27   + More
A0A2J7RJI7   A0A067R6R0   A0A1L8E003   A0A1L8DZT1   A0A026WQ33   A0A1L8E028   A0A0J7L4S6   A0A2A4K324   A0A2A4K4G6   A0A2A4K4R2   A0A1Y1NMV7   A0A1Y1NIF1   A0A1Y1NJI0   A0A1Y1NLM9   A0A2W1C1K2   E2A3J5   A0A2H1WHX8   A0A1I8NMR4   A0A1I8NMR0   H9J9L4   A0A158NG93   A0A1Q3FZQ1   A0A0T6BHQ0   E0VFM9   F4WP59   A0A232FET6   A0A194RGY8   A0A0L7R9Q9   A0A0Q9X3C6   A0A0Q9X184   B4N076   A0A1A9WXC6   A0A182NFP2   A0A0P9BNS5   T1PB54   A0A1W4UNX2   B3MKQ9   A0A1I8MUY9   A0A1W4UNP4   A0A1I8MUZ4   Q95U27   A0A182PE22   A0A3B0JGT3   A0A3B0K7E6   A0A3B0JHA4   A0A182VRG1   A0A182RX38   A0A0L0BQQ4   Q16R10   A0A182QVG0   Q7KTL6   A0A182FRV9   B4HXY9   A0A182XGF3   A0A182HZX3   Q9VM74   B4P000   Q7PYT2   A0A0R1DKJ9   A0A182U2G4   A0A182M6L2   A0A0Q5WNB0   A0A182UNV4   A0A182JL69   W5JHL6   A0A182LR05   A0A0R3NVL1   B4GKY8   Q29JY6   A0A0Q5WK11   A0A182XW09   A0A0A1XLT2   F2FB79   B3N5Y2   A0A0R3NV36   A0A0A1XIM4   A0A0J9QX13   T1DU38   A0A084WSH3   A0A0J9QXC9   A0A023EVB6   W8AVD2   A0MNP7   A0A1W4X1N1   A0A1W4X2R6   A0A1B6IHG3   A0A1B6K4L7   B4LRP9   A0A0Q9WAQ8   B4LRP8   A0A195EV54   T1HYS4   A0A034V3M3  

Pubmed

26227816    26354079    22118469    24845553    24508170    30249741    + More
28004739    28756777    20798317    19121390    21347285    20566863    21719571    28648823    17994087    25315136    26108605    17510324    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    12364791    14747013    17210077    20920257    23761445    20966253    15632085    25244985    25830018    22936249    24438588    24945155    24495485    17951426    25348373   

EMBL

ODYU01003105    SOQ41442.1    JTDY01005237    KOB67217.1    KQ460883    KPJ11232.1    + More
NWSH01000511    PCG75950.1    AGBW02008689    OWR52770.1    KQ459603    KPI92724.1    NEVH01002992    PNF40993.1    KK852847    KDR15092.1    GFDF01002073    JAV12011.1    GFDF01002074    JAV12010.1    KK107139    QOIP01000003    EZA57806.1    RLU24744.1    GFDF01002075    JAV12009.1    LBMM01000631    KMQ97942.1    NWSH01000184    PCG78655.1    PCG78653.1    PCG78652.1    GEZM01001567    JAV97666.1    GEZM01001569    JAV97664.1    GEZM01001565    JAV97668.1    GEZM01001568    GEZM01001566    JAV97665.1    KZ149895    PZC78836.1    GL436444    EFN71977.1    ODYU01008761    SOQ52637.1    BABH01005037    ADTU01015065    ADTU01015066    ADTU01015067    ADTU01015068    GFDL01002000    JAV33045.1    LJIG01000146    KRT86794.1    DS235123    EEB12185.1    GL888243    EGI63990.1    NNAY01000372    OXU28817.1    KQ460398    KPJ15196.1    KQ414621    KOC67569.1    CH963920    KRF98791.1    KRF98790.1    EDW78011.2    CH902620    KPU73497.1    KA645380    AFP60009.1    EDV31590.2    AY058354    AAL13583.1    OUUW01000006    SPP81567.1    SPP81566.1    SPP81565.1    JRES01001511    KNC22346.1    CH477726    EAT36864.1    AXCN02000239    AE014134    BT031332    AAN10603.1    ABY21745.1    CH480818    EDW51919.1    APCN01002017    APCN01002018    AAF52449.2    CM000157    EDW87827.2    AAAB01008987    EAA01006.3    KRJ97422.1    AXCM01001046    CH954177    KQS70650.1    ADMH02001227    ETN63586.1    CH379062    KRT04988.1    CH479184    EDW37304.1    EAL32825.3    KQS70651.1    GBXI01002321    JAD11971.1    BT126166    ADZ99418.1    EDV59141.2    KRT04987.1    GBXI01003929    JAD10363.1    CM002910    KMY88637.1    GAMD01000494    JAB01097.1    ATLV01026539    ATLV01026540    ATLV01026541    ATLV01026542    ATLV01026543    KE525415    KFB53167.1    KMY88638.1    GAPW01000535    JAC13063.1    GAMC01013710    JAB92845.1    EF014219    ABJ91581.1    GECU01035477    GECU01021350    JAS72229.1    JAS86356.1    GECU01001319    JAT06388.1    CH940649    EDW64651.1    KRF81772.1    EDW64650.1    KQ981965    KYN31772.1    ACPB03001412    GAKP01022587    JAC36365.1   

Proteomes

UP000037510    UP000053240    UP000218220    UP000007151    UP000053268    UP000235965    + More
UP000027135    UP000053097    UP000279307    UP000036403    UP000000311    UP000095300    UP000005204    UP000005205    UP000009046    UP000007755    UP000215335    UP000053825    UP000007798    UP000091820    UP000075884    UP000007801    UP000095301    UP000192221    UP000075885    UP000268350    UP000075920    UP000075900    UP000037069    UP000008820    UP000075886    UP000000803    UP000069272    UP000001292    UP000076407    UP000075840    UP000002282    UP000007062    UP000075902    UP000075883    UP000008711    UP000075903    UP000075880    UP000000673    UP000075882    UP000001819    UP000008744    UP000076408    UP000030765    UP000192223    UP000008792    UP000078541    UP000015103   

PRIDE

H9J9L4    Q95U27    Q7KTL6    Q9VM74    F2FB79   

Pfam

PF00999   Na_H_Exchanger

Interpro

IPR006153   Cation/H_exchanger        + More
IPR038770   Na+/solute_symporter_sf       

Gene 3D

1.20.1530.20    

ProteinModelPortal

A0A2H1VLY0   A0A0L7KVC7   A0A194R0K4   A0A2A4JX14   A0A212FGB7   A0A194PJ27   + More
A0A2J7RJI7   A0A067R6R0   A0A1L8E003   A0A1L8DZT1   A0A026WQ33   A0A1L8E028   A0A0J7L4S6   A0A2A4K324   A0A2A4K4G6   A0A2A4K4R2   A0A1Y1NMV7   A0A1Y1NIF1   A0A1Y1NJI0   A0A1Y1NLM9   A0A2W1C1K2   E2A3J5   A0A2H1WHX8   A0A1I8NMR4   A0A1I8NMR0   H9J9L4   A0A158NG93   A0A1Q3FZQ1   A0A0T6BHQ0   E0VFM9   F4WP59   A0A232FET6   A0A194RGY8   A0A0L7R9Q9   A0A0Q9X3C6   A0A0Q9X184   B4N076   A0A1A9WXC6   A0A182NFP2   A0A0P9BNS5   T1PB54   A0A1W4UNX2   B3MKQ9   A0A1I8MUY9   A0A1W4UNP4   A0A1I8MUZ4   Q95U27   A0A182PE22   A0A3B0JGT3   A0A3B0K7E6   A0A3B0JHA4   A0A182VRG1   A0A182RX38   A0A0L0BQQ4   Q16R10   A0A182QVG0   Q7KTL6   A0A182FRV9   B4HXY9   A0A182XGF3   A0A182HZX3   Q9VM74   B4P000   Q7PYT2   A0A0R1DKJ9   A0A182U2G4   A0A182M6L2   A0A0Q5WNB0   A0A182UNV4   A0A182JL69   W5JHL6   A0A182LR05   A0A0R3NVL1   B4GKY8   Q29JY6   A0A0Q5WK11   A0A182XW09   A0A0A1XLT2   F2FB79   B3N5Y2   A0A0R3NV36   A0A0A1XIM4   A0A0J9QX13   T1DU38   A0A084WSH3   A0A0J9QXC9   A0A023EVB6   W8AVD2   A0MNP7   A0A1W4X1N1   A0A1W4X2R6   A0A1B6IHG3   A0A1B6K4L7   B4LRP9   A0A0Q9WAQ8   B4LRP8   A0A195EV54   T1HYS4   A0A034V3M3  

PDB

4CZ9     E-value=0.0729329,     Score=86

KEGG

101739835    no KO assigned | (RefSeq) mitochondrial sodium/hydrogen exchanger 9B2-like

GO

GO:0015299   GO:0016021   GO:0015108   GO:0005903   GO:0015385   GO:0003096   GO:0006812   GO:0005515   GO:0031032   GO:0030060   GO:0019752   GO:0016491   GO:0016295   GO:0016296   GO:0055085  

Length:

606

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

262.66927

Exp number, first 60 AAs:

0.00172

Total prob of N-in:

0.05549

outside

1  -  139

TMhelix

140  -  162

inside

163  -  168

TMhelix

169  -  191

outside

192  -  194

TMhelix

195  -  217

inside

218  -  258

TMhelix

259  -  281

outside

282  -  285

TMhelix

286  -  308

inside

309  -  320

TMhelix

321  -  343

outside

344  -  362

TMhelix

363  -  382

inside

383  -  388

TMhelix

389  -  411

outside

412  -  414

TMhelix

415  -  434

inside

435  -  446

TMhelix

447  -  469

outside

470  -  478

TMhelix

479  -  501

inside

502  -  552

TMhelix

553  -  575

outside

576  -  606

 

 

Pi

207.937952

Theta

150.084139

Tajima's D

1.434976

CLR

0.303293

CSRT

0.774261286935653

Interpretation

Uncertain