SGID The Silkworm Genome Information Database
Gene
KWMTBOMO07142
Pre Gene Modal
BGIBMGA010405
Annotation
PREDICTED:_protein_fuzzy_homolog_isoform_X2_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 2.47
 

Sequence

CDS
ATGTCGGTTGTAGTAATTGCCATAGCCACTGATAGTGGTGTACCAATATTTTCTAGGAAACGAGGCAACAGTGACACTGTACAATTTTCAACAATAGCATCATTACATGGTATTAACATGTTTACTAAATGCCACAATTTAACAATGTTGAATACGCTTGTTGATAATGGCAAAATATTATGGAAGGAGTACTGTAAGAGCGTCACACTTATCGGCATAGCAACTGGTGGCTTAGAATGCGATTTAGAACTTCTCTTGGCATCTATACATGATGTCATGATATTTTGCATTGGAAAGAAGGAACTAGAAACATTAAAAAATGTTGATCAAACCAAAAGAGATTTAAGACAGTGCTATCCTTTAATAGATTATTTGTTGGAATCCCTAGATCCGAATGCAATTTCAAGTCCATTACCAACTTTAGTACTTGATCTTGTACAGAGCTTTTTGTGTCCACAAGCTCAACAATTGCAGCAAGCACTAGACAACTATGCGGAAAGTGTAACTGGGAGATGGGCATGCCTTAGTATACATGGACATCTAGTAGCCACAAGCTCCGATTTTGATGAGCTGAACCCAAGAGAAGCACGACTTATGCTGTTACTGGCTGCTTCACAAGATGGTGCACCCCTGCGCGAAACACCTGTATATTTACCTCACATGAGCCCAAATGTCGCATTCAGAGCGGTGACGTGCAAGCTCTTATCAGACGTTTATATACTAGTTGTGTGTGGAGCTACTCCGCCTCTATCGCAAATCGATGAAATAGTTTTGCTTTGTTGGGAAGGATACGCTCAAGTAATAAAAGAAGCCAAACTAATACATCCCAGGAATTTTCCAATGAGTATAACATTTGAACCATGTGTTTTAGCTATTCTAGTCATAAACATACCGAAGCGCAGGTGTGTATTTTCGAGACATTTGCACCCGACACAAAAAGGACGCGGCATGTCCGGGTCACACAGATTGGACATACTAAGAACATTTTACATAACTACAGCCAGAGATTTAGCTCCAGAATTGCGTATAGATGACCAAGAGAGAGATTATTTGGCTGGTTTAACTGAAACATATTGGTGTTCAGAATATCATAAATGTCACGCTCAGAGAATGAGAAATCTGTTGTGTTGTGTTCTTTACACGTCTACCGTCCACAATCACACAATGAGATCGATCACAAATCAAATATTGCAAGATTTAAGTTCAAACAAAGAAATATATTGGTGA
Protein
MSVVVIAIATDSGVPIFSRKRGNSDTVQFSTIASLHGINMFTKCHNLTMLNTLVDNGKILWKEYCKSVTLIGIATGGLECDLELLLASIHDVMIFCIGKKELETLKNVDQTKRDLRQCYPLIDYLLESLDPNAISSPLPTLVLDLVQSFLCPQAQQLQQALDNYAESVTGRWACLSIHGHLVATSSDFDELNPREARLMLLLAASQDGAPLRETPVYLPHMSPNVAFRAVTCKLLSDVYILVVCGATPPLSQIDEIVLLCWEGYAQVIKEAKLIHPRNFPMSITFEPCVLAILVINIPKRRCVFSRHLHPTQKGRGMSGSHRLDILRTFYITTARDLAPELRIDDQERDYLAGLTETYWCSEYHKCHAQRMRNLLCCVLYTSTVHNHTMRSITNQILQDLSSNKEIYW

Summary

EMBL
GDQN01008656    GDQN01006245    JAT82398.1    JAT84809.1    NWSH01000511    PCG75949.1    + More
GDQN01011602    JAT79452.1    ODYU01003105    SOQ41441.1    PCG75948.1    KQ460883    KPJ11233.1    KQ459603    KPI92723.1    AGBW02008689    OWR52771.1    BABH01005568    PCG75947.1    JTDY01005237    KOB67218.1    KQ971338    EFA02550.2    KK852680    KDR18596.1    KZ288269    PBC30022.1    NEVH01018372    PNF23701.1    NNAY01000079    OXU31183.1    KQ761768    OAD57111.1    KQ435824    KOX72202.1    KQ434864    KZC09052.1    GL767043    EFZ14300.1    GL452916    EFN76584.1    KQ981276    KYN43694.1    GL443495    EFN62021.1    KQ982566    KYQ54750.1    GEZM01045531    JAV77762.1    ADTU01004235    GEDC01031609    GEDC01019369    GEDC01018807    GEDC01016588    JAS05689.1    JAS17929.1    JAS18491.1    JAS20710.1    KQ977220    KYN04904.1    KK107151    QOIP01000003    EZA57236.1    RLU24530.1    PNF23702.1    GFTR01005835    JAW10591.1    GBBI01004803    JAC13909.1    GDKW01001081    JAI55514.1    ACPB03011045    GECL01001101    JAP05023.1    DS231860    EDS39314.1    AJWK01018606    GAPW01001861    JAC11737.1    JXUM01088613    KQ563713    KXJ73451.1    CH477236    EAT46642.1    GL887645    EGI70545.1    KQ978543    KYN30220.1    KQ976407    KYM91388.1    UFQT01000449    SSX24466.1    AAAB01008964    EAA12277.3    GEDC01021927    GEDC01000462    JAS15371.1    JAS36836.1    KB632299    ERL91737.1    AJVK01030794    ADMH02000447    ETN66433.1    AXCN02000747    APCN01000752    AXCM01001953    GECU01002431    JAT05276.1    GFDL01014337    JAV20708.1    GBHO01042525    JAG01079.1    GBRD01006959    JAG58862.1    GEZM01045530    JAV77763.1    KK854197    PTY12933.1    KQ414613    KOC68940.1    CVRI01000058    CRL02569.1    GEDV01006208    JAP82349.1    GFPF01002633    MAA13779.1    GL732524    EFX89267.1    GFAC01004368    JAT94820.1    GACK01005675    JAA59359.1    ATLV01014417    KE524970    KFB38700.1    RCHS01002064    RMX49719.1    LSMT01000033    PFX31628.1    GEFH01002638    JAP65943.1    GDIQ01171864    LRGB01003123    JAK79861.1    KZS04418.1    GGLE01006065    MBY10191.1    GEFM01005731    GEGO01006752    JAP70065.1    JAR88652.1    NEDP02005201    OWF42941.1    LJIJ01000198    ODN00592.1    JH431728    PYGN01000770    PSN41040.1    GDIQ01018945    JAN75792.1    CH933807    EDW11627.1    LNIX01000002    OXA60430.1    AFYH01030578    AFYH01030579    AFYH01030580    AFYH01030581    AFYH01030582   
Pfam
PF03164   Mon1        + More
PF17903   KH_8
Interpro
IPR026069   Fuzzy        + More
IPR004353   Mon1       
IPR036612   KH_dom_type_1_sf       
IPR004087   KH_dom       
IPR041174   KH_8       
IPR024166   rRNA_assembly_KRR1       
SUPFAM
SSF54791   SSF54791       
Gene 3D

Ontologies

Topology

Length:
408
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.08706
Exp number, first 60 AAs:
0.01328
Total prob of N-in:
0.01306
outside
1  -  408
 
 

Population Genetic Test Statistics

Pi
201.687113
Theta
158.60412
Tajima's D
1.17345
CLR
0.165886
CSRT
0.703564821758912
Interpretation
Uncertain
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