Gene

KWMTBOMO07140  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010406

Annotation

PREDICTED:_argonaute_2_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr12(-):6267018-6282366      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.56

CDS

ATGGCTAGAGGAAAAAACAAAGGTGGTAAGAAAGAGGCACCTGATTCTACGAAAACCCCTTCTTCTGAAAGTCAGCCTTCAGAAAGTCAACCTTCAACATCCCAAATTCCAACTACAGAACCAACAACTACTATTGAAGATGATTTAGGGGGCCTTGGTCTTGGTGAATCTAGAAAAAGACGGCCCAGGAAGAAGCCAACTGAAAAACAAGAATCATTAGCTCAAGCTGAATTGTCAAACCCAAAGCTTACTCAAACTGATAATCCGAAAGCTGAGGTTCCTAAAACAGAGGCTCCTAAAACCGAGGCTCTTAAACCTGAGGCTCCTATCCCTGAGGCTTGTAAATCTGAAGCTCCTAAAAGTGAAGAGTCCAAAATCGAAACTAGAGGTTCTAAACCAGAAGCTGCTGCTGATAAGCCTCAAGATGATGATGATGGTTTGGGTTTGGGGTTAGGTGGTGGGGGACGAAAAAAAACTCGCAGCAGGAAACCTAAATTTACAGCTGTAGAAACAGACATCAAATATTCAAAAGCTCCATCAAGTGAACCTGCAATTCCAGGACCATCACAAAGTAAACCAATAACGTCAACTGCATCACAGCCTATTCAATATGTACAAAATAAACCAGAGGTCAAAGTGGCCCCTGCAGCCCCTGTTTTGTACAAGATACCAGATAAAATATTGTCTCCACCCTCAAGAACTGTGCCGATTTTAACTAATTATTTGGCTATGAAAATAACAAAACCATTGAAAATTTACCGTTACGACGTCACATTCAAACCAGATAAACCGAAGAAATTTATTGCACAAGTGTTTAAACTGGTAAAGTCTAAAGAATTTCCTAAAGAAATCCTTGCCTTTGATCAAACAAAAAATTGTTATTCACTGACTCCGCTGCCAAAAATCACCACTGAGAGATATGGTGTAAAAGTGGTGATCAAAGATATGAACGGTAAAGACATGCCGTTTGAAGTGTCATTCAAAGCTAGTGGTATAGTAGACTACAATAATGTTCTGAAGCATATGGCAACGGGTGGATCATCCCTTAATGCACCAACTGACACCATACAATGTATTGACATAGTGTTAAAACAAGGAACATTGGAATCATATGTGAAAGCAGACAGACAATACTTCATGCGTCCTGCATCTCCGATTGACTTGGGCGACGGGCTCGAGATGTGGACTGGTTTATTCCAATCTGCTATATTTACATCGAAAGCCTTCATCAACGTTGATGTTGCACACAAAGGTTTCCCAAAGAATCAACCTATGATTGATGCTTTCACGCGTGATTTTCGCTTGGACCCCAACCGTCCAATGGATCGGCAACCAGGTCGTGCTGTTGAAGCTTTCAATGAATTCATTAGAGGGCTTAAGGTCGTATCGAAGATACTTGGTACCGGACCTTCTTCGGGACAATTACGCGAGCACATATGCAACGGGGTTGTCGACCCACCGTCACGTCAAACATTTACGTTGGAGAACGACAAAGGACCGCCGGTTAGGATGACCGTATACGAATATTTTATGAAAGAGAAAAAATACAGGATTAAGTATCCGGACTTGAACTGTTTGTGGGTCGGCCCGAAAGACAAGAACATATATCTACCGATGGAACTAGTCGAAGTTGCATATGGCCAGGCCCGTAACAAGCAATTAAATGACAGACAATTGTCGACAATGGTGAGAGAGGCTGCAACCCCACCTGATGTACGGAAACGTAAGATTGAGGAAGTGATTCAGAAGATGAATTACTCGAAGAATCAATTCTTCAAAACATACGGTTTGGAGATAGCCAATGAGTTTTATCAAGTTGAAGCGAAAATTCTCGAAGCGCCCACATTAGAAGTGGGTCCACGGCAATTTACTGTACCAAAGAAGGGAGTATGGCAGGCCAACTGTCTTCTGAAACCGGAAGCTCTGAATTCATGGGGCTTCATTGCCATAGAATTGGATCCACGTGGATGTAATTATGAAGACATCGTGTCGAAGCTAATGAATACCGGTCGACAAATGGGCATGAACGTGACCCAACCAAAGATGGCTTGCTTCAACATCCGTATAAATGACCTGCACAAGAGTATGCTGCACGCTCTAGAAAAACAGGTCAATTTCCTGGTCGTGGTCGTTTCTGGACGGGGCCGCGATTATTATCACAAGCTGAAACAGATTGCCGAACTCAAAGTGGGTATACTGACGCAGTGTATCAAAGAAGATACCGCCACGCGCCGAATGAACCCACAAACAGCTCGGAACATTTTACTAAAGGTGAATTCGAAGCTTATGGGAATAAATCAGGCATTGGAGAATCGTTCCATTCCTCAGTGCTTAAAGGGTGGGGCTGTGATGATCGTGGGCGCTGACGTCACGCATCCATCGCCAGATCAGAGTAATATACCGAGTATCGCCGCCGTAACCGCCTCGATGGATACGAAATGCTACATATACAACATCGAACTGAGTATACAGACACCGAAGAAAGAGATGATCGTTCAGTTTGAGGACATAATGGTGGATCATTTCCATGCTTTCAAGAAAAGTCAGGGGATTCTGCCGAAGAAGGTGTTCGTGTTCCGTGACGGGGTTTCTGAGGGTCAATTTGCTGAGGTAATGAAGAGTGAACTGACTGGATTGCATCGCGCCTACCAACGTGTCGCGGGATTGAACGCTAAACCAGAAGTATTGTTCATTCTTGTACAAAAACGTCATCACACGAGATTCTTCCTGCCCGGGAACAACGCCCGTTTCAACGTCGATCCGGGGACTGTGGTCGACCGTGATATAGTACATCCACGTGAATTGGACTTCTATTTGGTGTCTCACCAAGCGATCAAGGGCACGGCTCGTCCGACGCGCTACCACGCCGTCTGCAACGACGGCAGGATCCCGGAGAACGAAGTGGAGCACCTCGCGTACTACCTGTGCCATCTGTACGCGCGTTGTATGCGCGCCGTGTCATACCCCGCGCCGACCTACTACGCGCACTTGGCCTGTCTGCGGGCTCGCTCGCTCACCTATGGCGAGATATTCAATAATAACGATCTCGAGAAGAATCCCAAACGTCTCCGGGTCCTCGACAGCATGCTGAAACAGAGCCGTATGTTCTTCGTCTAA

Protein

MARGKNKGGKKEAPDSTKTPSSESQPSESQPSTSQIPTTEPTTTIEDDLGGLGLGESRKRRPRKKPTEKQESLAQAELSNPKLTQTDNPKAEVPKTEAPKTEALKPEAPIPEACKSEAPKSEESKIETRGSKPEAAADKPQDDDDGLGLGLGGGGRKKTRSRKPKFTAVETDIKYSKAPSSEPAIPGPSQSKPITSTASQPIQYVQNKPEVKVAPAAPVLYKIPDKILSPPSRTVPILTNYLAMKITKPLKIYRYDVTFKPDKPKKFIAQVFKLVKSKEFPKEILAFDQTKNCYSLTPLPKITTERYGVKVVIKDMNGKDMPFEVSFKASGIVDYNNVLKHMATGGSSLNAPTDTIQCIDIVLKQGTLESYVKADRQYFMRPASPIDLGDGLEMWTGLFQSAIFTSKAFINVDVAHKGFPKNQPMIDAFTRDFRLDPNRPMDRQPGRAVEAFNEFIRGLKVVSKILGTGPSSGQLREHICNGVVDPPSRQTFTLENDKGPPVRMTVYEYFMKEKKYRIKYPDLNCLWVGPKDKNIYLPMELVEVAYGQARNKQLNDRQLSTMVREAATPPDVRKRKIEEVIQKMNYSKNQFFKTYGLEIANEFYQVEAKILEAPTLEVGPRQFTVPKKGVWQANCLLKPEALNSWGFIAIELDPRGCNYEDIVSKLMNTGRQMGMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLMGINQALENRSIPQCLKGGAVMIVGADVTHPSPDQSNIPSIAAVTASMDTKCYIYNIELSIQTPKKEMIVQFEDIMVDHFHAFKKSQGILPKKVFVFRDGVSEGQFAEVMKSELTGLHRAYQRVAGLNAKPEVLFILVQKRHHTRFFLPGNNARFNVDPGTVVDRDIVHPRELDFYLVSHQAIKGTARPTRYHAVCNDGRIPENEVEHLAYYLCHLYARCMRAVSYPAPTYYAHLACLRARSLTYGEIFNNNDLEKNPKRLRVLDSMLKQSRMFFV

Similarity

Belongs to the argonaute family.

Uniprot

Q59HV7   H9JLK5   A0A1E1W3W5   S4PXK7   A0A194PP02   V9VMZ1   + More
A0A2P1DMB4   A0A2H1VKR2   A0A2P1DMA4   A0A194R5G7   A0A1L3A5U8   A0A2J7PLB5   A0A0H4TJG6   A0A0N7A4X9   A0A0P4VZ54   A0A2J7PTN0   A0A1B6G8N2   A0A2P1DM93   A0A2J7PXL5   A0A2P1DMA0   L7ZCB8   A0A2H8TDS2   A0A0A9YB08   A0A0A9Y3D9   A0A146M025   M1G580   A0A1B6JH63   A0A0A9Y4X8   A0A1B6H7S0   J9K604   A0A0A9Y3E4   A0A1B6E7E6   A0A146MBF7   K7IUR5   A0A088AHH6   M4QPV2   A0A224XI39   A0A059TDQ1   A0A0V0G4V6   A0A1B6EZT3   L7ZEB6   A0A2I6PIY6   A0A232F670   W0USA9   S4W6D0   V9IIM8   U4UG89   A0A069DXE5   A0A2P1DM57   A0A2A3EBN7   A0A1L7NZL9   A0A2P1DM56   A0A2P1DM59   A0A0M8ZR84   A0A1B6J502   K7IUR4   A0A1B6KNE2   A0A2S2QCZ4   A0A0B5GCK6   D6W6C8   A0A140H4W4   A0A343U6Z1   A0A1Y1MI53   A0A1Y1MF47   A0A1Y1MB83   A0A2S2NEM7   A0A1J1J0G6   A0A1W4WGE6   U5EQ50   D6WJK1   A0A1B6KHK0   A0A1L8DX84   A0A1L8DXA1   A0A2M4A0J9   A0A0L7RIR7   A0A1Y1MGF8   A0A1Y1MD84   A0A1L8DX68   A0A1L8DX88   A0A1L8DX42   A0A2M4A0F9   A0A1L8DXB9   A0A1I8PE29   A0A310SEJ1   A0A2M4A002   A0A182WEV7   A0A2M4A055   A0A182LP74   A0A0Q9XPN2   B4KUJ5   A0A2M4BCW5   A0A1J1HZG9   A0A1S4H7Z8   A0A1L8EDG9   A0A2M4BCY5   A0A2M3YZG2  

Pubmed

19121390    23622113    26354079    26446351    27129103    23029445    + More
25401762    26823975    23396108    20075255    24391810    29267401    28648823    23974011    23792802    23537049    26334808    28034629    25541004    18362917    19820115    26864546    28004739    20966253    17994087   

EMBL

AB206986    BAD91160.2    BABH01005568    GDQN01009473    GDQN01000269    JAT81581.1    + More
JAT90785.1    GAIX01004868    JAA87692.1    KQ459603    KPI92855.1    KF717085    AHC98010.1    MG225443    AVK59454.1    ODYU01003105    SOQ41439.1    MG225444    AVK59455.1    KQ460883    KPJ11106.1    KU053336    APF46960.1    NEVH01024426    PNF17122.1    KP274882    AKQ00044.1    KM200721    AIY24303.1    GDKW01000718    JAI55877.1    NEVH01021232    PNF19698.1    GECZ01011008    JAS58761.1    MG225457    AVK59468.1    NEVH01020854    PNF21081.1    MG225456    AVK59467.1    JX023535    AGE12620.1    GFXV01000067    MBW11872.1    GBHO01016909    JAG26695.1    GBHO01016915    JAG26689.1    GDHC01006502    JAQ12127.1    JX870427    AFZ74933.1    GECU01009197    JAS98509.1    GBHO01016908    JAG26696.1    GECU01036960    JAS70746.1    ABLF02029966    ABLF02029967    ABLF02029969    ABLF02029971    GBHO01016910    JAG26694.1    GEDC01003462    JAS33836.1    GDHC01002257    JAQ16372.1    AAZX01005919    KC316038    AGH30327.1    GFTR01008717    JAW07709.1    KF192313    AHY18683.1    GECL01003693    JAP02431.1    GECZ01026213    JAS43556.1    JX023534    AGE12619.1    MG266015    AUM60042.1    NNAY01000905    OXU25990.1    HF912425    CCV01213.1    KF032647    AGO85972.1    JR047739    AEY60492.1    KB632281    ERL91353.1    GBGD01000151    JAC88738.1    MG225428    AVK59439.1    KZ288310    PBC28619.1    LC194146    BAW35368.1    MG225427    AVK59438.1    MG225426    AVK59437.1    KQ435969    KOX67889.1    GECU01013464    JAS94242.1    AAZX01002655    AAZX01007711    GEBQ01027005    JAT12972.1    GGMS01006396    MBY75599.1    KP036492    AJF15705.1    KQ971319    EFA11590.1    KT191020    AMN92165.1    KY284071    AUZ94234.1    GEZM01036122    JAV82957.1    GEZM01036124    JAV82955.1    GEZM01036125    JAV82954.1    GGMR01003065    MBY15684.1    CVRI01000066    CRL06019.1    GANO01003424    JAB56447.1    KQ971342    EFA04626.2    GEBQ01029030    JAT10947.1    GFDF01003060    JAV11024.1    GFDF01003062    JAV11022.1    GGFK01000961    MBW34282.1    KQ414583    KOC70760.1    GEZM01036123    JAV82956.1    GEZM01036121    JAV82958.1    GFDF01003043    JAV11041.1    GFDF01003026    JAV11058.1    GFDF01003061    JAV11023.1    GGFK01000921    MBW34242.1    GFDF01003025    JAV11059.1    KQ794714    OAD47019.1    GGFK01000806    MBW34127.1    GGFK01000811    MBW34132.1    CH933809    KRG06072.1    EDW18223.2    GGFJ01001706    MBW50847.1    CVRI01000037    CRK93503.1    GFDG01002170    JAV16629.1    GGFJ01001726    MBW50867.1    GGFM01000909    MBW21660.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000235965    UP000007819    UP000002358    + More
UP000005203    UP000215335    UP000030742    UP000242457    UP000053105    UP000007266    UP000183832    UP000192223    UP000053825    UP000095300    UP000075920    UP000075882    UP000009192   

PRIDE

Q59HV7    H9JLK5   

Pfam

PF16486   ArgoN        + More
PF02170   PAZ
PF16488   ArgoL2
PF08699   ArgoL1
PF02171   Piwi
PF04042   DNA_pol_E_B
PF16487   ArgoMid
PF00013   KH_1
PF00620   RhoGAP

Interpro

IPR032474   Argonaute_N        + More
IPR012337   RNaseH-like_sf       
IPR036085   PAZ_dom_sf       
IPR036397   RNaseH_sf       
IPR014811   ArgoL1       
IPR032472   ArgoL2       
IPR003100   PAZ_dom       
IPR003165   Piwi       
IPR007185   DNA_pol_a/d/e_bsu       
IPR032473   Argonaute_Mid_dom       
IPR004088   KH_dom_type_1       
IPR004087   KH_dom       
IPR036612   KH_dom_type_1_sf       
IPR000198   RhoGAP_dom       
IPR008936   Rho_GTPase_activation_prot       

SUPFAM

SSF53098   SSF53098        + More
SSF101690   SSF101690       
SSF54791   SSF54791       
SSF48350   SSF48350       

Gene 3D

3.30.420.10     3.30.1370.10     1.10.555.10    

ProteinModelPortal

Q59HV7   H9JLK5   A0A1E1W3W5   S4PXK7   A0A194PP02   V9VMZ1   + More
A0A2P1DMB4   A0A2H1VKR2   A0A2P1DMA4   A0A194R5G7   A0A1L3A5U8   A0A2J7PLB5   A0A0H4TJG6   A0A0N7A4X9   A0A0P4VZ54   A0A2J7PTN0   A0A1B6G8N2   A0A2P1DM93   A0A2J7PXL5   A0A2P1DMA0   L7ZCB8   A0A2H8TDS2   A0A0A9YB08   A0A0A9Y3D9   A0A146M025   M1G580   A0A1B6JH63   A0A0A9Y4X8   A0A1B6H7S0   J9K604   A0A0A9Y3E4   A0A1B6E7E6   A0A146MBF7   K7IUR5   A0A088AHH6   M4QPV2   A0A224XI39   A0A059TDQ1   A0A0V0G4V6   A0A1B6EZT3   L7ZEB6   A0A2I6PIY6   A0A232F670   W0USA9   S4W6D0   V9IIM8   U4UG89   A0A069DXE5   A0A2P1DM57   A0A2A3EBN7   A0A1L7NZL9   A0A2P1DM56   A0A2P1DM59   A0A0M8ZR84   A0A1B6J502   K7IUR4   A0A1B6KNE2   A0A2S2QCZ4   A0A0B5GCK6   D6W6C8   A0A140H4W4   A0A343U6Z1   A0A1Y1MI53   A0A1Y1MF47   A0A1Y1MB83   A0A2S2NEM7   A0A1J1J0G6   A0A1W4WGE6   U5EQ50   D6WJK1   A0A1B6KHK0   A0A1L8DX84   A0A1L8DXA1   A0A2M4A0J9   A0A0L7RIR7   A0A1Y1MGF8   A0A1Y1MD84   A0A1L8DX68   A0A1L8DX88   A0A1L8DX42   A0A2M4A0F9   A0A1L8DXB9   A0A1I8PE29   A0A310SEJ1   A0A2M4A002   A0A182WEV7   A0A2M4A055   A0A182LP74   A0A0Q9XPN2   B4KUJ5   A0A2M4BCW5   A0A1J1HZG9   A0A1S4H7Z8   A0A1L8EDG9   A0A2M4BCY5   A0A2M3YZG2  

PDB

4F3T     E-value=1.46819e-105,     Score=982

KEGG

692544    K11593 eukaryotic translation initiation factor 2C | (RefSeq) Ago2, BmAgo2; argonaute 2

GO

GO:0003676   GO:0031047   GO:0003677   GO:0006260   GO:0003887   GO:0051301   GO:0003723   GO:0007165   GO:0005515   GO:0006468   GO:0031032   GO:0030060   GO:0019752   GO:0016491   GO:0016295   GO:0016296  

Length:

1038

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00543

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1  -  1038

 

 

Pi

196.930349

Theta

155.378931

Tajima's D

0.787725

CLR

0.275352

CSRT

0.59862006899655

Interpretation

Uncertain