SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07130
Annotation
PREDICTED:_uncharacterized_protein_LOC105842541_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.596
 

Sequence

CDS
ATGAGCCAACATTCTGAGGATTTAGATACTCTTATTAAGCGACGAGGTGCAATTAAAGCCAAACTTACTATTTTCAGAAATTATATTAAACCTCTTAGTAGTTTTTCTAGCTTGACCGACTTACAACGTTTTGAGTTGGAAGGACGTTATGAGCGTATTCAGTGTTTATACAACGACTTCGACAAGTTACAGACGGAGATCGAGACGTTGTTGGACGCACCCGATGACGACTTTAAATCCCGGTGTGAGTTCGAGGACCAATACCATCCTACGGTGGCACTGGCGCGAAGCCTGCTTTCAGCAACTACCAACTCAGAAGGTTCAGCTATGGTGAGAGTGCGTGGTGCCGATGGCACTAAGCACCCCGCCCGAGTTTTGCTGGACAACGGTAGTACCGCCAACTTTGTCACAGACGCCTTTTCATCCAAGCTTGGGCTGTCACGACACGATACTAGCTCCACTACAATCACAGGTATAAACAATCAGACCTCTTATAGTACACAGTCTTGTAATCTCACGCTCGAGTCCTATTACGGTAATTATACAGTCGGCTTAGGTTGTCTAATATTGCCTGAGAGTCAACGAAATTCAAGAGAGTACGATTGGTTGTACTTGGAGCTACGTGCCGTCGAAGGACAACCCGGCGGATCTTGTTTCCCGTGGGCTGAAGGCTGA
Protein
MSQHSEDLDTLIKRRGAIKAKLTIFRNYIKPLSSFSSLTDLQRFELEGRYERIQCLYNDFDKLQTEIETLLDAPDDDFKSRCEFEDQYHPTVALARSLLSATTNSEGSAMVRVRGADGTKHPARVLLDNGSTANFVTDAFSSKLGLSRHDTSSTTITGINNQTSYSTQSCNLTLESYYGNYTVGLGCLILPESQRNSREYDWLYLELRAVEGQPGGSCFPWAEG

Summary

Pfam
PF05585   DUF1758
Interpro
IPR008737   Peptidase_asp_put       

Ontologies

GO

Topology

Length:
224
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01321
Exp number, first 60 AAs:
0.00447
Total prob of N-in:
0.06175
outside
1  -  224
 
 

Population Genetic Test Statistics

Pi
250.773596
Theta
168.641394
Tajima's D
1.838333
CLR
0.494774
CSRT
0.853657317134143
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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