Gene

KWMTBOMO07129

Pre Gene Modal

BGIBMGA010408

Annotation

Uncharacterized_protein_OBRU01_17665_[Operophtera_brumata]

Location

Bomo_Chr12(-):5676116-5678412      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.2

CDS

ATGCGCAGGCTAACAACGGATGAAATCTACAAGAAGCGCTTAGAAAAAAACAAACTACGGGCTTTTTCAGCAATTTGCAGTGATGAAAACGAAAAAGAAAATGAAAATCCGAAATTCAAAGTTAATAACACCAAGAACGCAACTTCAAAAGTCAGCGAACAGGAAATCCATAAAATTGAACATAACCCGTTTAATTTGGCTAGTCACATGCGACTTTTTACGTTAAGAAAAAGTGAAAAGAAATCAAGTATGCCAGAACCTTTCATCACCAACGATCCAAGAACAATATGTGATATTGATAAAACTTTTTATAAAATAATCGAAGGGAGGCCTCTGAGACAGTTCAGTGATATAAAAGTTTATATGAGGAATATAAGGGACATAACATTATTCAGAGCAAACATTGCTTATCGGAGAGATCAAATAATTAAGATAGATACGGCTTTACGAGATGAATATACTGAATACGAAAAAATTGATACTTTTTTTACTGAAACAAAATCTAACTTTGTTCGATTCGCCCAAGAATGCTACGAGAGAGGAAAAATTGTTGAAGCCTTGGCCAATGCAAAGTCTATTGAACTAGACAAAATGGTCGATCAATTAGAAAATTACAGCTTCATTTGCGTTAAAATACGAAATCAGTTGTCTGGCTTACTAGCAACGTTTGAAAATTTAGATAAATACCGCGGATTCTTATTTTCGCTGAGCCCTATGTCTTGGCAAAATAAGTTCATGTCACACTTTAACGAAAATATTATTGACGTAAACTACCTACAAGAAAATATTACGTCAGCAGAAACAATTAATGGTTTAAAAGTAACACTTCTCAAACTTCAAAAAGTAAGTCCGGAGCTATTTTTCGATGAACCTAAACAACTTATGACTATTTGCGATGATTTGGGTAAACAATGCTTAAATTATATGAAAATAAATGTTTTTGCAAATAACATTATTGTTCAGGTGATGAAATATCGTGGCTTTTATAGAAAGATAGTACAAGATGAAGTATTTGAACTAGAAGAATTTATTGAGATTTTCCAGAAATATGTAGTTTGGATGGAAGACAAAGAAAAAGAGAACAAAGCTATTTTTGAGAGGATATTATTAAATGAATTCCATGAATTGTTCGCTTCATATGACACCGCTAAACTTTTCACTTGTGTACAATACGTCAATACCCGTCTCTTTGAAACGCCAGAAGATCCAAAAGACAGTCTGTCACTTCTAACGGGTCAATTAGAACTACAATATTTAGAACTTACATCACAACTGGACTGTTTGGATCAAGAAATAGTAAAGGCAGCAACGAATGAACTCTTCGCTGAAGATATAAAAATGATGAAGATGGCACACAAGGCGCAAAGGGAACTCAAAGAGTGTGATTTACTTAGTAAAGCTTTGTATACTAGTTTCGAACCGCCGCGATATAAACGTAAATAA

Protein

MRRLTTDEIYKKRLEKNKLRAFSAICSDENEKENENPKFKVNNTKNATSKVSEQEIHKIEHNPFNLASHMRLFTLRKSEKKSSMPEPFITNDPRTICDIDKTFYKIIEGRPLRQFSDIKVYMRNIRDITLFRANIAYRRDQIIKIDTALRDEYTEYEKIDTFFTETKSNFVRFAQECYERGKIVEALANAKSIELDKMVDQLENYSFICVKIRNQLSGLLATFENLDKYRGFLFSLSPMSWQNKFMSHFNENIIDVNYLQENITSAETINGLKVTLLKLQKVSPELFFDEPKQLMTICDDLGKQCLNYMKINVFANNIIVQVMKYRGFYRKIVQDEVFELEEFIEIFQKYVVWMEDKEKENKAIFERILLNEFHELFASYDTAKLFTCVQYVNTRLFETPEDPKDSLSLLTGQLELQYLELTSQLDCLDQEIVKAATNELFAEDIKMMKMAHKAQRELKECDLLSKALYTSFEPPRYKRK

Uniprot

H9JLK7   A0A0L7L0T0   A0A2A4JXI5   A0A2H1V764   A0A212F5S5   A0A194PF95   + More
A0A2A4KA76   A0A0N1I7V8   A0A0L7L0Y4   A0A2H1WQ44   H9JR56   A0A1E1WC92   A0A3S2M739   A0A2A4K9W0   A0A067RQ27   A0A194PEJ5   A0A2J7PJR2   A0A2A4K8Y9   A0A0N0PCL8   A0A194PG65   A0A1W4XH95   D6WGB8   A0A1B6JBG4   A0A1B6HIA8   N6TDL5   U4U739   A0A1B6FM39   A0A2P8XMR8   A0A1B6L842   E0VTX4   A0A2H1WRY2   A0A2P8YFB6   A0A1B6C853   A0A1B6D8I0   A0A195FU55   E2B0J6   A0A088AMI0   E2BZQ7   A0A151WIC2   A0A0N1ITK4   A0A3L8DUW9   A0A026X226   A0A151IVY0   A0A154P3C5  

Pubmed

19121390    26227816    22118469    26354079    24845553    18362917    + More
19820115    23537049    29403074    20566863    20798317    30249741    24508170   

EMBL

BABH01005522    JTDY01003879    KOB68884.1    NWSH01000479    PCG76102.1    PCG76103.1    + More
ODYU01001020    SOQ36657.1    AGBW02010142    OWR49090.1    KQ459606    KPI91693.1    NWSH01000021    PCG80693.1    KQ460499    KPJ14283.1    JTDY01003833    KOB68939.1    ODYU01010215    SOQ55183.1    BABH01016476    GDQN01006456    JAT84598.1    RSAL01000016    RVE52990.1    PCG80694.1    KK852533    KDR21844.1    KPI91692.1    NEVH01024946    PNF16549.1    PCG80681.1    KPJ14282.1    KPI91694.1    KQ971329    EFA01145.1    GECU01011343    JAS96363.1    GECU01033260    JAS74446.1    APGK01041748    APGK01041749    APGK01041750    APGK01041751    APGK01041752    KB740997    ENN75838.1    KB632100    ERL88852.1    GECZ01018501    JAS51268.1    PYGN01001703    PSN33300.1    GEBQ01024433    GEBQ01020098    JAT15544.1    JAT19879.1    DS235774    EEB16830.1    SOQ55184.1    PYGN01000642    PSN42933.1    GEDC01027684    JAS09614.1    GEDC01015342    JAS21956.1    KQ981261    KYN44155.1    GL444624    EFN60791.1    GL451657    EFN78819.1    KQ983089    KYQ47603.1    KQ435791    KOX74378.1    QOIP01000004    RLU24086.1    KK107054    EZA61449.1    KQ980882    KYN11959.1    KQ434796    KZC05738.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000053268    UP000053240    + More
UP000283053    UP000027135    UP000235965    UP000192223    UP000007266    UP000019118    UP000030742    UP000245037    UP000009046    UP000078541    UP000000311    UP000005203    UP000008237    UP000075809    UP000053105    UP000279307    UP000053097    UP000078492    UP000076502   

PRIDE

H9JLK7    H9JR56   

Pfam

PF13863   DUF4200        + More
PF00270   DEAD
PF00271   Helicase_C
PF00202   Aminotran_3

Interpro

IPR025252   DUF4200        + More
IPR027417   P-loop_NTPase       
IPR011545   DEAD/DEAH_box_helicase_dom       
IPR014014   RNA_helicase_DEAD_Q_motif       
IPR000629   RNA-helicase_DEAD-box_CS       
IPR014001   Helicase_ATP-bd       
IPR001650   Helicase_C       
IPR015422   PyrdxlP-dep_Trfase_dom1       
IPR005814   Aminotrans_3       
IPR015424   PyrdxlP-dep_Trfase       
IPR015421   PyrdxlP-dep_Trfase_major       

SUPFAM

SSF52540   SSF52540        + More
SSF53383   SSF53383       

Gene 3D

3.40.640.10     3.90.1150.10    

CDD

cd00079  HELICc

ProteinModelPortal

H9JLK7   A0A0L7L0T0   A0A2A4JXI5   A0A2H1V764   A0A212F5S5   A0A194PF95   + More
A0A2A4KA76   A0A0N1I7V8   A0A0L7L0Y4   A0A2H1WQ44   H9JR56   A0A1E1WC92   A0A3S2M739   A0A2A4K9W0   A0A067RQ27   A0A194PEJ5   A0A2J7PJR2   A0A2A4K8Y9   A0A0N0PCL8   A0A194PG65   A0A1W4XH95   D6WGB8   A0A1B6JBG4   A0A1B6HIA8   N6TDL5   U4U739   A0A1B6FM39   A0A2P8XMR8   A0A1B6L842   E0VTX4   A0A2H1WRY2   A0A2P8YFB6   A0A1B6C853   A0A1B6D8I0   A0A195FU55   E2B0J6   A0A088AMI0   E2BZQ7   A0A151WIC2   A0A0N1ITK4   A0A3L8DUW9   A0A026X226   A0A151IVY0   A0A154P3C5  

KEGG

101738897    no KO assigned | (RefSeq) uncharacterized LOC101738897

GO

GO:0005524   GO:0004386   GO:0003676   GO:0031514   GO:0030170   GO:0008483  

Length:

480

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01153

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02044

outside

1  -  480

 

 

Pi

156.56165

Theta

148.455287

Tajima's D

0.210522

CLR

12.918951

CSRT

0.424578771061447

Interpretation

Uncertain