Silkworm Genome Informatics Database

Gene

KWMTBOMO07120

Annotation

PREDICTED:_anoctamin-5-like_[Papilio_machaon]

Location

Bomo_Chr12(+):5175518-5175974 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.18 Mitochondrial Reliability : 1.476 Nuclear Reliability : 1.057

CDS

ATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAA

Protein

MFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWQSRFESVRLQDMATLGGKGVLKASSQFGVTQDILD

Uniprot

A0A0N0PF55 A0A0C2CZV2 H3EUR4 H3F5A8 A0A2H2JHK7 K7H4F8 + More
K7H4F7 H3ETI8 A0A183GMJ5 A0A3P8ECA2 A0A2G5VIT1 A0A016TV39 A0A2G5TSG2 E3MBG9 A0A183F3N6 A0A3P7TDY7 A0A2H2IVX6 A0A0C2DAI6 A0A2H2J0T6

Pubmed

26354079 18806794 25730766

EMBL

KQ459680 KPJ20472.1 KN729202 KIH62598.1 UZAH01035625 VDP41785.1 + More
PDUG01000001 PIC51673.1 JARK01001411 EYC06502.1 PDUG01000005 PIC29926.1 DS268433 EFO97645.1 UZAH01000669 VDO19161.1 KN726990 KIH66733.1

Proteomes

UP000053240 UP000005239 UP000005237 UP000050761 UP000230233 UP000024635 + More
UP000008281

Pfam

PF13358 DDE_3 + More
PF00292 PAX

Interpro

IPR038717   Tc1-like_DDE_dom        + More
IPR009057   Homeobox-like_sf
IPR001523   Paired_dom
IPR036388   WH-like_DNA-bd_sf

SUPFAM

SSF46689 SSF46689

Gene 3D

1.10.10.10

ProteinModelPortal

A0A0N0PF55 A0A0C2CZV2 H3EUR4 H3F5A8 A0A2H2JHK7 K7H4F8 + More
K7H4F7 H3ETI8 A0A183GMJ5 A0A3P8ECA2 A0A2G5VIT1 A0A016TV39 A0A2G5TSG2 E3MBG9 A0A183F3N6 A0A3P7TDY7 A0A2H2IVX6 A0A0C2DAI6 A0A2H2J0T6

KEGG

NA

GO

GO:0003677 GO:0006355

Length:

74

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00077

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.39116

outside

1 - 74

Pi

214.676921

Theta

124.451931

Tajima's D

2.276556

CLR

0

CSRT

0.92110394480276

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree