Gene

KWMTBOMO07113

Pre Gene Modal

BGIBMGA010540

Annotation

PREDICTED:_nucleoside_diphosphate_kinase_homolog_5-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr12(+):4801622-4809592      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.624

CDS

ATGTCCGTGACTTCATCGGACTCACAAGCACCTAGTCATGCGTATTCCGAACGCACGCTTGCATTGATTAAGCCGGAAGCATTCCAGGATTCAGAAGCTATTCAAGATCATATAAGAAACAATGGCTTCACTATCCTAGCTAAGCGCGTAGTTCAACTAACACCGGAGCAAGCAGCGGAGCTTTACAGAGGTCACTACGGACGACAACACTTTCCTCATTTAGTAGCTCAAATGTCATGCGGTCCGATAGTGGTATTGGTCTTAGCTGCCCGAGATTGCATTCAAAAATGGCGTACCCTTATGGGCCCGGCCAGGGTCGCCGAAGCTCAAGCATACTGGCCAGATAGTCTACGGGCATGCTACGGTCGTCGCACTAAATACGGAGATTATTTTAACGGTCTCCATGGCAGCGAGAACCTCGCGGAGGCTGTGAGAGAAATACATTTCTTCTTTCCTAACATGATAGTCGGTCCTTTACTTCGGAATTGGCAAATAAACGATTATATGCAGAAGTACATTACTCCCACGCTGCTGCCTGGCCTCACGGCTCTGGCTCACGAGCGACCCGCTGAACCAATATTATGGCTGGCAGAGTTTCTCCAACGTCACAATCCCAATGAACCGAAACTAGCCGATAAGATAAATCATCAGCGCGAACAACAGCGCTGCTACACTCCCGTGCCATCTGAAGAGAGTATTTTAAAGTAA

Protein

MSVTSSDSQAPSHAYSERTLALIKPEAFQDSEAIQDHIRNNGFTILAKRVVQLTPEQAAELYRGHYGRQHFPHLVAQMSCGPIVVLVLAARDCIQKWRTLMGPARVAEAQAYWPDSLRACYGRRTKYGDYFNGLHGSENLAEAVREIHFFFPNMIVGPLLRNWQINDYMQKYITPTLLPGLTALAHERPAEPILWLAEFLQRHNPNEPKLADKINHQREQQRCYTPVPSEESILK

Similarity

Belongs to the NDK family.

Uniprot

H9JLY8   A0A2A4K698   A0A212EYE5   A0A194PHT9   A0A194QTT1   A0A2W1BLJ1   + More
A0A2H1W375   A0A0L7LGS6   R7VDT5   A0A026WC64   A0A0M9A460   A0A3S0ZQV8   A0A3L8DQ32   A0A2J7RGB8   A0A2P8ZDQ8   A0A0B7BLA3   H2RMP2   A0A088AQ63   A0A195B5N2   A0A1I8J6H0   A0A1I8J7U1   C3Z4Q2   V4AX29   A0A154P751   A0A3P8VUU1   A0A2C9JFT3   A0A1S3HVK6   H2RMP3   A0A3B4DIH6   A0A1I8FZ90   A0A3B4BQQ4   A0A3M6TTD0   E3TFQ7   A0A3Q1FKB2   Q5C0E8   C1LEL0   A0A0J7L453   A0A210QX70   A0A151I935   A0A3Q2ZSG0   A0A310SAD2   A0A151WKK2   A0A195F349   A0A091HQS0   A0A2B4SG78   A0A2Y9IN21   A0A1U7TI02   A0A3B4TJR5   K1R1K7   Q6DGQ8   E3TC92   A0A3Q0SPW4   A7SAT1   E4WZV0   A0A195EDH3   A0A3B4X0M7   A0A2Y9I609   A0A3B1JW45   F1R4T6   A0A3Q0SPY4   A0A1V4KUS0   A0A3P9C455   A0A3P8P3Q6   A0A2I0MA10   D2HK89   A0A3P8P3X7   A0A3P8P3E9   E2RLI0   A0A3Q7SB01   A0A384C4I7   A0A3Q7XBR5   A0A3P8P3E2   T2MEZ8   G1U1P7   A0A3Q3EJD0   G1PFK6   A0A0P7VNB2   A0A060Y8Z4   A0A3Q3LEJ0   A0A3Q3EJB1   M3YE61   A0A096MRH7   U3J2N0   A0A3Q7NXI8   A0A2U3Y0L8   A0A1S2ZDA8   A0A3Q1CHN4   A0A2U3VRP5   A0A099ZYX1   A0A3B4EPN7   G7P8D5   G7MUV9   A0A1I8H3N6   A0A2K6BWU4   A0A3B3BIB8   H9GNT0   A0A2K5RV07   B5XCD3   A0A1S3SUU9   A0A3B4ERJ6  

Pubmed

19121390    22118469    26354079    28756777    26227816    23254933    + More
24508170    30249741    29403074    21551351    26392545    18563158    24487278    15562597    30382153    20634964    16617374    28812685    22992520    17615350    21097902    25329095    23594743    25186727    23371554    20010809    16341006    24813606    24065732    21993624    24755649    23749191    22002653    17431167    29451363    21881562    20433749   

EMBL

BABH01005455    NWSH01000098    PCG79589.1    AGBW02011531    OWR46516.1    KQ459603    + More
KPI92882.1    KQ461194    KPJ06951.1    KZ149975    PZC75952.1    ODYU01005902    SOQ47272.1    JTDY01001252    KOB74401.1    AMQN01004214    KB292914    ELU16784.1    KK107293    EZA53261.1    KQ435739    KOX76865.1    RQTK01000233    RUS83718.1    QOIP01000005    RLU22396.1    NEVH01004401    PNF39884.1    PYGN01000087    PSN54634.1    HACG01046863    CEK93728.1    KQ976598    KYM79580.1    NIVC01001097    NIVC01001059    PAA72339.1    PAA72806.1    NIVC01000225    PAA87565.1    GG666580    EEN52491.1    KB201004    ESO99615.1    KQ434829    KZC07765.1    RCHS01002970    RMX44655.1    GU589191    ADO29143.1    AY810988    AAX26877.2    FN317407    CAX73138.1    LBMM01000892    KMQ97264.1    NEDP02001389    OWF53324.1    KQ978323    KYM95140.1    KQ766694    OAD53591.1    KQ983002    KYQ48409.1    KQ981855    KYN34888.1    KL217647    KFO97442.1    LSMT01000090    PFX28053.1    JH817943    EKC43147.1    BC076282    AAH76282.1    GU587971    ADO27928.1    DS469611    EDO39201.1    FN653019    FN657060    CBY22696.1    CBY42344.1    KQ979039    KYN23258.1    FQ377590    LSYS01001584    OPJ88152.1    AKCR02000025    PKK26515.1    ACTA01003696    ACTA01179687    ACTA01187685    ACTA01195683    GL192940    EFB18537.1    AAEX03007811    AAEX03007812    HAAD01004437    CDG70669.1    AAGW02027777    AAGW02027778    AAGW02027779    AAPE02012945    JARO02001602    KPP74946.1    FR908440    CDQ88191.1    AEYP01016737    AEYP01016738    AEYP01016739    AEYP01016740    AEYP01016741    AHZZ02030049    AHZZ02030050    ADON01130636    KL870149    KGL87011.1    AQIA01060619    AQIA01060620    AQIA01060621    AQIA01060622    AQIA01060623    AQIA01060624    AQIA01060625    CM001281    EHH54556.1    JSUE03037003    JSUE03037004    JSUE03037005    CM001258    EHH26824.1    NIVC01000300    PAA85954.1    AAWZ02036183    BT048702    ACI68503.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000014760    UP000053097    UP000053105    UP000271974    UP000279307    UP000235965    UP000245037    UP000005226    UP000005203    UP000078540    UP000095280    UP000215902    UP000001554    UP000030746    UP000076502    UP000265120    UP000076420    UP000085678    UP000261440    UP000275408    UP000221080    UP000257200    UP000036403    UP000242188    UP000078542    UP000264800    UP000075809    UP000078541    UP000054308    UP000225706    UP000248482    UP000189704    UP000261420    UP000005408    UP000261340    UP000001593    UP000078492    UP000261360    UP000248481    UP000018467    UP000000437    UP000190648    UP000265160    UP000265100    UP000053872    UP000008912    UP000002254    UP000286640    UP000261680    UP000291021    UP000286642    UP000001811    UP000261660    UP000001074    UP000034805    UP000192224    UP000193380    UP000000715    UP000028761    UP000016666    UP000286641    UP000245341    UP000079721    UP000257160    UP000245340    UP000053858    UP000261460    UP000009130    UP000233100    UP000006718    UP000233120    UP000261560    UP000001646    UP000233040    UP000087266   

PRIDE

H9JLY8   

Pfam

PF00334   NDK        + More
PF05186   Dpy-30

Interpro

IPR007858   Dpy-30_motif        + More
IPR034907   NDK-like_dom       
IPR036850   NDK-like_dom_sf       
IPR001564   Nucleoside_diP_kinase       
IPR012410   NDK_H5       
IPR023005   Nucleoside_diP_kinase_AS       

SUPFAM

SSF54919   SSF54919       

Gene 3D

3.30.70.141    

ProteinModelPortal

H9JLY8   A0A2A4K698   A0A212EYE5   A0A194PHT9   A0A194QTT1   A0A2W1BLJ1   + More
A0A2H1W375   A0A0L7LGS6   R7VDT5   A0A026WC64   A0A0M9A460   A0A3S0ZQV8   A0A3L8DQ32   A0A2J7RGB8   A0A2P8ZDQ8   A0A0B7BLA3   H2RMP2   A0A088AQ63   A0A195B5N2   A0A1I8J6H0   A0A1I8J7U1   C3Z4Q2   V4AX29   A0A154P751   A0A3P8VUU1   A0A2C9JFT3   A0A1S3HVK6   H2RMP3   A0A3B4DIH6   A0A1I8FZ90   A0A3B4BQQ4   A0A3M6TTD0   E3TFQ7   A0A3Q1FKB2   Q5C0E8   C1LEL0   A0A0J7L453   A0A210QX70   A0A151I935   A0A3Q2ZSG0   A0A310SAD2   A0A151WKK2   A0A195F349   A0A091HQS0   A0A2B4SG78   A0A2Y9IN21   A0A1U7TI02   A0A3B4TJR5   K1R1K7   Q6DGQ8   E3TC92   A0A3Q0SPW4   A7SAT1   E4WZV0   A0A195EDH3   A0A3B4X0M7   A0A2Y9I609   A0A3B1JW45   F1R4T6   A0A3Q0SPY4   A0A1V4KUS0   A0A3P9C455   A0A3P8P3Q6   A0A2I0MA10   D2HK89   A0A3P8P3X7   A0A3P8P3E9   E2RLI0   A0A3Q7SB01   A0A384C4I7   A0A3Q7XBR5   A0A3P8P3E2   T2MEZ8   G1U1P7   A0A3Q3EJD0   G1PFK6   A0A0P7VNB2   A0A060Y8Z4   A0A3Q3LEJ0   A0A3Q3EJB1   M3YE61   A0A096MRH7   U3J2N0   A0A3Q7NXI8   A0A2U3Y0L8   A0A1S2ZDA8   A0A3Q1CHN4   A0A2U3VRP5   A0A099ZYX1   A0A3B4EPN7   G7P8D5   G7MUV9   A0A1I8H3N6   A0A2K6BWU4   A0A3B3BIB8   H9GNT0   A0A2K5RV07   B5XCD3   A0A1S3SUU9   A0A3B4ERJ6  

PDB

3ZTS     E-value=2.01075e-17,     Score=215

KEGG

101742800    K20790 nucleoside diphosphate kinase homolog 5 | (RefSeq) nucleoside diphosphate kinase homolog 5-li

GO

GO:0016301   GO:0006228   GO:0006241   GO:0004550   GO:0006183   GO:0048515   GO:1902176   GO:0016021   GO:0003351   GO:0007286   GO:0060271   GO:0021591   GO:0036126   GO:0006165   GO:0030060   GO:0019752   GO:0016491   GO:0016295   GO:0016296  

Length:

235

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.56945

Exp number, first 60 AAs:

0.00013

Total prob of N-in:

0.08698

outside

1  -  235

 

 

Pi

37.237607

Theta

189.514214

Tajima's D

1.123528

CLR

0.16516

CSRT

0.689965501724914

Interpretation

Uncertain