Silkworm Genome Informatics Database

Gene

KWMTBOMO07111

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106708942_[Papilio_machaon]

Location

Bomo_Chr12(+):4786962-4792841 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.064 Nuclear Reliability : 1.517

CDS

ATGGCCAGTTTAAAAAAGTTATTACCCCAGGAGGGTACCTCCCGCTCAGCGGGAGGAGAATCCCTCCGTGTGGCCGACTCGTCGGACGCACGCTGCCCCGCGTATTCTGGGGGGGGCAAAAACTGCCTAGACGTCAGGTCCGGGAAGGACGGAGTTCAAAAGAAGAAAATTATGTCCGAGAAGGACCCTGAAGTAAGCTCCTTAAGAGCCGATGTCGTGTCGGACAACGATATGGCCACAGTTGGTTCGGCCCAGTCGTCGACCCATTCGTCGCCGACACGACGACGGCGGAAAAGGGTGCTCAATATAAGCTCGGACGGGCTGAGTAGCAGCTCCGGCTCGGAGGCTCAGGATCCGACAGGTGTGAAGCCCAGAGCAGTCACGCCGTCAAAGCGTGGACGGGGACGCCCTGCGACCACAGGGCAGTACGTTGGCATGGCCGCTGCCAGGCAAGCGTACCTCAAGGCGCAAAAAGAGGAGAAGGAGCTCACTGAGAGCGCGCGCACCACACGCCACAAGAGGAGAGCGGCTGAAGGGTCTGTCCCTAAGCCCGATGCCGAGCGTAGGCTCCATCAAAGTGCAGAGGTGGCCCTGATGGTCGCCGCCAAATCCAGCAGCCCGAAGGGCACGTACGTGCGTGCACTGAAGGAGTTGGCAGTCACTGTCAAGGAGGCCACGGAGGACCTTGTGGGCTACACCGCAGCCGAAGAGGCTAAGAGACTGCGAGCGGTCAACGTCAAGCAGGAGCAGGAGATCCTGCAACTGCGTAAGGAGCTCGATGAAGTTAGAAGGGAGTTGGCGAGGGTTTCGCAGGTGCTAGCGTTGCCCACATCGACTGCGACCCCGGCCCCGAACACCAAGGAGGAAGAGGAGGAGTTGCGCCTACAGCGCATTATGCGAGCTGTCGGCACTATGCTCGACGCTCGCTTTGAAGGGCTGGAGGCACGGCTTCTACCGGAGCCCCGAATGCGACCACCGCTAGCGGCGGACAAGCAGAGGAGCCGGGAAGAATCGTCTAATCCCCCTGTCGTCGTTGACGCTGCACCGGATGCGGCACCGTCATCAGTGCCACCGATGACATTGGCGAAAAAGAGGATGCGTGGCCCCAAGAGAAGTGTCACCGCGCAAGCGGCTTCATCCGAAACGCACACCTTCCTCCCGGCTCCAGCTTCCATGATCGAGAGCTGGTCAACGGTCACCCGTAGGGGTGCTCGACCGAGGGAGGAAGCAGTGAGGACGGTTCCAGCGGCAGCTATCGCTGAAGCGGAAAGGAAAGACCGGTCTTCTGTAAAGAGGAAAGAGAAGAAGCTGCGCCCTCCACGCACTCAGGCCGTTGTCCTCAAGCTGCAACCAGAGGCCGTGGAAAGAGGACTCACGTACCGCACTGTACTCGCCGAAGCGAGGGCCAAGGTAGATCCTGGGGCACTTGGAATACCCATCCAGCGCATCCGGTCTGCAGTGACTGGGTCTAAGGTGCTGGTAGTGGAAGGTGCAGACCAGAGCGCCAAGGCCGATCTCCTGGCCCAAAAGCTTCGTGAGGTTCTGCCCGCAGAAGGGGTCATAGTGACCAGGCCAGTAACGACTGCAGCCATCCGCATCAGCGGACTGGACGACTCCCTGATGCCGGAGGAACTTACCGCGGAGCTTGCCCGGATTGGCGAATGCGCTCCTGATGCGGTGAAGATCGGAGACATCAAGTATGGCCCAGGCGGGATGGGTCAAGTATTGGTCCGGTTGCCCGTCGTTGCCACGATGAAGGTTCTCGCCGTTCCAAAACTGAGGGTTGGTTGGAGCGTGCTCCGCGCTTGTTTGTTAGAAGCTAAGAAGCTACAGTGCTTCCGATGCCATGAGCTAGGGCACGTGAGCGCCCGATGTCCTTCGTCGGTCGACCGCAGCCGGGATTGTTATCGGTGCGGCCAGACCGGCCACGTAGCGGCCGGCTGCTCTCTTGCACCACACTGCGCTGGGAATCTCAACCATTGCGCCAGAGCTCAGGACCTTTTGTTCCAGAGCATGGCGGAGGGGTTGACCCATCTTGCGGTGGTCGCCGAGCCGTATCGGGTCCCTTCGAGCCCCGATTGGGCGGCCGATTTGGAGGGCCGAGTGGCAATCATCCGGCGTTGTTGTGTGGGTGCTCCGCCTACGTTTGCCGTTGTTGAAAGAGGTCGCGGCTTCGTTGCCGTCCTCTGGGCCGAGATATTCGTGTTGGGAGTGTACTTTTCCCCAAACAGGACGCTCGCCGAGTTTGAGGTTTTCCTCGGCGAGCTCAGCCGCGTCGTTGGAAGGTCGCACTTCCGACGGATTCTCGTTCTAGGTGACCTAAATGCCAAGTCATTGTCTTGGGGTTCCTCTAGGACGTGCCCCAGAGGTAGAGCGGTGGAGGAGTGGCTGGTCGGAAGCGGTCTCCTCATCCTCAATCGCGGTACGGAACTCACATGCGTGCGACGTTTGGGCGGGTCCGTGGTGGACGTTACATTCGCCACGCCTGACGTCGCATATCGCGTACGCGGTTGGGCGGTGATGGTTGGCGAGGAGACCCTCTCCGACCACCGTTACATCCGATTCAGTGTCGCCGCGACCCCGGTGGGTTCTGTTCGGAGCTTTTCCTTGCCCATCAGTGGCAGCGCTAGGGGTCCTCGTTGGGCCCAGAAGCGCCTCAACATCGAGCGGTTGCGTGAGGCGGCCATAGTGCAGGCGTGGCGTCTTGACTCGCTTGGCGAGCCAGCAGACGTGTGCGAGGGGGTGGAGCGTCTGCGCGAGGCAATGTCACGGGTGTGTGACGCTGCTATGCCTCGCGTGAGAGCTCTCGCTCCTAAGCGCCAAGTTCATTGGTGGACCGAGGAGATCGCCAGCCAGCGCCGGCTATGCGATATTAGTCGTCGCACATACCAGCGATATCGACGACGGAGAACGCGCCGGGACCCCAACGAGGAGGACCGCCTGTACGAAGTGTACAGGACGGCGATAAGAACCCTGCGCTTGGCTATCGGGGAGGCGAAGGAGGCCGCCTGGAACGACCTACTGGCCTCGCTGGACCGTGACCCGTGGGGGCGGCCCTACAGGCTGGCGCGTAATGCGCTTCGCCGTTGGGCTCCTCCCGCAACCAGCACCCTGCCGCCGGAAACATTGCAGCGGGTAGTCGGGGGTCTGTTTCCCGATTTATCCGGGACGGCCTTCGTCCCCCCTGTGATGACAATGGCGCGGATTGCTGATAGCGAAGAGCTTGAGGACGTCTCCCAGGTGGAGTTCGATTTGGCTGTACAGAGGATGCGGGCTAAGCGCACGGCACCCGGTCCCGATGGGATCTCGTCCCAAGCGTGGGCGCTCGCCTTGACAGGTGACGGCTTGGGGCCTGCCCTCCAAGGGCTATTCAGCAGGTGCCTCCGTGAGGGCAGGTTCCCAGAGCCATGGAAGACTGGTCGGCTTGTCCTTATTCCTAAGGAAGGCCGGCCACGTGATGAGCCAAGCGGGTACCGCCCAATCGTCGTGCTGGACGAGGCTGGTAAGCTCCTCGAGCGCATCGTCGCCAGTCGCCTCGTCCAGCACCTCGAAAGCGTTGGGCCTGACCTGGCTCCTAACCAATATGGTTTCCGGAGAGGTCGCTCCACCATGGACGCGGTCTTGCGCGTCCGCCACCTCTCCGATCGTGCGTGCTCCGAGGGGGGCGTGTTGTTGGCTGTGTCGATTGATATCGCCAACGCCTTCAACACGATCCCTTGGAGCACGATCGTGGAATCGCTCCGGTTTCACCGCGTCCCCCCTAGTCTCCGGACCCTGATAGAGGATTACCTTTCAGGGCGAAATGTAGTCTTCCCCGAGAGGAGGGGGTGGGGACGGAAAGCGGTGTCGTGCGGGGTCCCGCAGGGCCTGCGTGGCGTCGACGTAGTGTGCTATGCCGACGACACGCTGGTGACGGCCCGCGGAGCCGACTACAGAGCCGCAGCGATCCTTGCGACGGCGGCGGTCTCCACCGTCGTTAGTCGCATTCGGAGATTAGGTCTTGAGGTGGCCCTCCGCAAGTCCGAAGCGGTGTGCTTTCACCCAGTCCGGAGGGGACCTCCTCCGGGAGCGAATCTCATAGTCGGTGGAGTATCGATCGCTGTCCAGCCGAAGCTCAAATATTTGGGCCTTGTGCTGGACAGTCGATGGCGCTTCGACCACCACTTTGGTGAGTTAGTCCCGAAGCTGCTGGGGATGGCGGGCGCACTAGCCCGTGTTCTCCCCAACGTCGGTGGTTGCAGCGCCGGCGTCCGGCGTCTGTACCTGGGGGTCGTGCGCAGTATGGCTTTGTACGGCGCTCCCGTGTGGTCGCCCGCACTCTCTGCGCGCAATGCAGCTTTGCTGCTACGAGCGCAGCGGGTGCTCGCGGTGAGAGTCATCAGGGGGTACCGTACGATCTCCCGGGAGGTCGCCTGCGCCCTCGCCGGTTCCCTTCCTTGGGATCTCGAGGCTGAGGTAGCAGCTGCGGTATACCGGCGCAGAACACAGTCCCTGAGTCGGGGATGGACGCCCGGCCCGTCGGCTGTCGTCACTCGCCGACGCACCCTCGAGGCCCTGGTGCCCGTGCTGGAGGCATGGTCAGATAGACGACACGGCGTACTCTCCTTCCACTTAACGCAGGTCCTCTCGGGGCATGGTTGCTTCGGGAGGTACCTGTGGAAGGTCTGCAGGAGAGAGCCACATCCGGGTTGCCACCAGTGCGGGCATCCGGACGATGACGCTCAGCATGCACTCGAAGCGTGCCCGCGTTGGGAGCGCTCGCGGCGAGACCTCATCGCGGTGCTGGGGAGAGACCTCTCCTTGCGGGCTGTCATCGCCCGCATGCTAGAGGACCAGAATTCTTGGGAGGCCATGACCAGGTTTTGCGACCTGGTCATGGCGTTCCGCGTAGTCTCCTGTGAGAAATTGGGGGAGGTGAAGGACCTCGGCTCTTCTCTTCTCCCCTTCTTCCTCTCAGGAGGCGCCGGAGTCCGACATAACCCGGTCCGTTACCCCCCTCGACCGGGTATCCGTAAATGGATTCCCCAGCGTTAA

Protein

MASLKKLLPQEGTSRSAGGESLRVADSSDARCPAYSGGGKNCLDVRSGKDGVQKKKIMSEKDPEVSSLRADVVSDNDMATVGSAQSSTHSSPTRRRRKRVLNISSDGLSSSSGSEAQDPTGVKPRAVTPSKRGRGRPATTGQYVGMAAARQAYLKAQKEEKELTESARTTRHKRRAAEGSVPKPDAERRLHQSAEVALMVAAKSSSPKGTYVRALKELAVTVKEATEDLVGYTAAEEAKRLRAVNVKQEQEILQLRKELDEVRRELARVSQVLALPTSTATPAPNTKEEEEELRLQRIMRAVGTMLDARFEGLEARLLPEPRMRPPLAADKQRSREESSNPPVVVDAAPDAAPSSVPPMTLAKKRMRGPKRSVTAQAASSETHTFLPAPASMIESWSTVTRRGARPREEAVRTVPAAAIAEAERKDRSSVKRKEKKLRPPRTQAVVLKLQPEAVERGLTYRTVLAEARAKVDPGALGIPIQRIRSAVTGSKVLVVEGADQSAKADLLAQKLREVLPAEGVIVTRPVTTAAIRISGLDDSLMPEELTAELARIGECAPDAVKIGDIKYGPGGMGQVLVRLPVVATMKVLAVPKLRVGWSVLRACLLEAKKLQCFRCHELGHVSARCPSSVDRSRDCYRCGQTGHVAAGCSLAPHCAGNLNHCARAQDLLFQSMAEGLTHLAVVAEPYRVPSSPDWAADLEGRVAIIRRCCVGAPPTFAVVERGRGFVAVLWAEIFVLGVYFSPNRTLAEFEVFLGELSRVVGRSHFRRILVLGDLNAKSLSWGSSRTCPRGRAVEEWLVGSGLLILNRGTELTCVRRLGGSVVDVTFATPDVAYRVRGWAVMVGEETLSDHRYIRFSVAATPVGSVRSFSLPISGSARGPRWAQKRLNIERLREAAIVQAWRLDSLGEPADVCEGVERLREAMSRVCDAAMPRVRALAPKRQVHWWTEEIASQRRLCDISRRTYQRYRRRRTRRDPNEEDRLYEVYRTAIRTLRLAIGEAKEAAWNDLLASLDRDPWGRPYRLARNALRRWAPPATSTLPPETLQRVVGGLFPDLSGTAFVPPVMTMARIADSEELEDVSQVEFDLAVQRMRAKRTAPGPDGISSQAWALALTGDGLGPALQGLFSRCLREGRFPEPWKTGRLVLIPKEGRPRDEPSGYRPIVVLDEAGKLLERIVASRLVQHLESVGPDLAPNQYGFRRGRSTMDAVLRVRHLSDRACSEGGVLLAVSIDIANAFNTIPWSTIVESLRFHRVPPSLRTLIEDYLSGRNVVFPERRGWGRKAVSCGVPQGLRGVDVVCYADDTLVTARGADYRAAAILATAAVSTVVSRIRRLGLEVALRKSEAVCFHPVRRGPPPGANLIVGGVSIAVQPKLKYLGLVLDSRWRFDHHFGELVPKLLGMAGALARVLPNVGGCSAGVRRLYLGVVRSMALYGAPVWSPALSARNAALLLRAQRVLAVRVIRGYRTISREVACALAGSLPWDLEAEVAAAVYRRRTQSLSRGWTPGPSAVVTRRRTLEALVPVLEAWSDRRHGVLSFHLTQVLSGHGCFGRYLWKVCRREPHPGCHQCGHPDDDAQHALEACPRWERSRRDLIAVLGRDLSLRAVIARMLEDQNSWEAMTRFCDLVMAFRVVSCEKLGEVKDLGSSLLPFFLSGGAGVRHNPVRYPPRPGIRKWIPQR

Uniprot

A0A0J7KQK3 A0A0J7NFZ0 A0A0J7KRB8 J9KJG8 X1WJY4 J9KM84 + More
A0A0J7KIS5 X1WZ64 A0A139WAH4 J9LA43 J9K6F0 A0A139WN93 A0A139WNC9 J9JY94 J9KNS1 J9KWM9 X1WXT5

Pubmed

18362917 19820115

EMBL

LBMM01004272 KMQ92618.1 LBMM01005474 KMQ91485.1 LBMM01003988 KMQ92922.1 + More
ABLF02041886 ABLF02011238 ABLF02018942 ABLF02041885 LBMM01006977 KMQ90149.1 ABLF02011183 ABLF02041884 KQ971388 KYB24913.1 ABLF02018098 ABLF02012448 ABLF02012450 ABLF02012455 ABLF02012460 KQ971310 KYB29499.1 KYB29500.1 ABLF02007989 ABLF02018808 ABLF02011927 ABLF02004854 ABLF02041317

Proteomes

UP000036403 UP000007819 UP000007266

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1
PF00098   zf-CCHC

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf
IPR036691   Endo/exonu/phosph_ase_sf
IPR005135   Endo/exonuclease/phosphatase
IPR000477   RT_dom

SUPFAM

SSF56219 SSF56219 + More
SSF57756 SSF57756

Gene 3D

3.60.10.10

ProteinModelPortal

A0A0J7KQK3 A0A0J7NFZ0 A0A0J7KRB8 J9KJG8 X1WJY4 J9KM84 + More
A0A0J7KIS5 X1WZ64 A0A139WAH4 J9LA43 J9K6F0 A0A139WN93 A0A139WNC9 J9JY94 J9KNS1 J9KWM9 X1WXT5

PDB

1WDU E-value=1.10237e-07, Score=140

KEGG

105842185 no KO assigned | (RefSeq) uncharacterized LOC105842185

GO

GO:0008270 GO:0003676 GO:0003964 GO:0016021 GO:0003824 GO:0005975 GO:0016616 GO:0030060 GO:0019752 GO:0016491 GO:0016295 GO:0016296

Length:

1677

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0663400000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1 - 1677

Pi

0

Theta

0

Tajima's D

0

CLR

0.049165

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree