Gene

KWMTBOMO07101  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010536

Annotation

PREDICTED:_lactase-phlorizin_hydrolase-like_[Bombyx_mori]

Location

Bomo_Chr12(+):4581412-4585036      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.091 PlasmaMembrane   Reliability : 1.549

CDS

ATGAAGTTTGAACATCGGATTATCTCGGAAGAAGCAGTGACAATGCTTCATTTACCTTCCAGTTATTTATTAGCATTATTAATATTGTTATGTATTTTAACGAATGCAACTTCGCGCGAATTCCCTAAAGGATTTTTGTTTGGAGCTGCTACAGCCTCTTACCAAATCGAAGGCGCTTGGAATATTGACGGAAAAACTGAAAATATATGGGATCGTGCCTGTCACAAAGTACCCAGCCCGGTAGCCGATAACTCTACGGGAGACATCGCAAATGATTCCTATAAACTTTACAAACGAGATGTTGAAATGATAAGAGAACTTGGTGTTGATTATTACAGATTCTCTGTGTCCTGGACTCGTATTTTACCCACGAGTTTCCCAGATTACATAAATGAAGCTGGAGTTGCTTATTACAATAATCTGATTGACGAATTACTCAAATACAATATTGAGCCGATGCTCACAATTTACCACTGGGACTTACCACAGAAATTACAGGATATGGGAGGTTGGACGAACCCATATATTATCGATTGGTATGCGGACTACGCCAGAGTTCTGTTCCAAAAATTTGGTGATCGAGTTAAGAATTGGATCACTATAAACGAACCGAAAGAAATTTGCTTCCAAGGTTACGCAATAGGTACATTAGCTCCAGCATACACTATGAGCGGAGTGGCTGATTACTTGTGTGGGAAAAACGTTCTTTTAGCTCACGCTAAAGCTTATCATATCTATGACAAAGAATTCCGACCTACCCAAAATGGAAATATCTCTATAACCATTAGTTGCCAATGGTATGAGCCTGAAAGCGATCGCGAAGAAGATATTAACGCAGCGAATGAAATGATCTTATTCGAGTGTGGTCAATACGGTCACCCTATATTTACTGACAGCGGTGACTATCCCGAAATAGTCAAGCAACGTGTAGCAGCTAAGAGTGCTGAACAAGGTTTCTTACGCTCACGGTTCCCAGAGCTAAGCCCTGAAGAAGTTCAATACATCCGTGGAACATCAGACTTTTTTGGTTTAAATCACTACTCGACATTTTTGACGTACAGAAATGAGTCAGTTGTCGGCTACTACGAAATACCTTCGTATAATGATGATGTTGGAGTACTCTTTTATGACAAGGAGGAATGGTCCATTGGTTCGCATAACAGAGTTAAGACCACACCATGGGGCTTCTACAAACTTTTGAGACAAATTTCGAATTTTTACAATAACGTTCCGATTATAATCACTGAAAACGGTTTCGCGACCCTTACCGGCTTCGAAGACAACGACCGAATCACGCATCTGAGATTGTATTTAAATGCTCTTCTAGACGCTATTAAAGATGGATCCGATATCAGACTGTATACTCCTTGGAGCTTGATGGATAATTTTGAATGGATGTCTGGATATACGCAAAGATTTGGACTTTATGAAGTTGATTACGACAGTCCAGAACTTACACGGACGCCGAGAAAATCTGCTTTTATATTCAAAGAAATTGTAAAATCAAGGACTCTAGACTTTGATTATAAACCTGAAAGCTACGTTATGACGATTGACGAAGGAAAATGA

Protein

MKFEHRIISEEAVTMLHLPSSYLLALLILLCILTNATSREFPKGFLFGAATASYQIEGAWNIDGKTENIWDRACHKVPSPVADNSTGDIANDSYKLYKRDVEMIRELGVDYYRFSVSWTRILPTSFPDYINEAGVAYYNNLIDELLKYNIEPMLTIYHWDLPQKLQDMGGWTNPYIIDWYADYARVLFQKFGDRVKNWITINEPKEICFQGYAIGTLAPAYTMSGVADYLCGKNVLLAHAKAYHIYDKEFRPTQNGNISITISCQWYEPESDREEDINAANEMILFECGQYGHPIFTDSGDYPEIVKQRVAAKSAEQGFLRSRFPELSPEEVQYIRGTSDFFGLNHYSTFLTYRNESVVGYYEIPSYNDDVGVLFYDKEEWSIGSHNRVKTTPWGFYKLLRQISNFYNNVPIIITENGFATLTGFEDNDRITHLRLYLNALLDAIKDGSDIRLYTPWSLMDNFEWMSGYTQRFGLYEVDYDSPELTRTPRKSAFIFKEIVKSRTLDFDYKPESYVMTIDEGK

Similarity

Belongs to the glycosyl hydrolase 1 family.

Uniprot

H9JLY4   H9JLY5   A0A2A4JPS5   A0A194R3H3   A0A194R360   A0A194PMT2   + More
A0A194PPG9   A0A194PPG4   A0A2H1VF65   A0A194R3H6   A0A194R4S7   A0A194R365   A0A194PNR8   A0A194PMT8   A0A194R8P7   A0A194PNS3   G9F9G9   G9F9I3   A0A3S2PE71   A0A194R400   A0A212EXF5   A0A212FF90   A0A212FF93   A0A194PU18   A0A194R3Z4   A0A0L7KVS3   A0A0L7LEZ3   A0A194PMG8   A0A212FBG8   A0A212EXF2   H9JXB3   A0A3S2NZ22   G9F9H3   A0A2W1BGQ3   A0A2H1VVL0   A0A2W1BA28   A0A2A4JQ50   A0A2A4JS29   A0A212FEI2   A0A2H1VWZ6   A0A2H1WY61   A0A2A4JNV2   A0A2A4JNT8   O61594   H9IZH5   A0A194RQF8   H9JMQ9   A0A2A4JPU6   A0A194PJU3   A0A2A4JCQ8   A0A2H1VWN4   A0A212F963   A0A1Y9IW90   A0A2H1VWC6   A0A194PRE4   H9J7W0   A0A194QNZ7   A0A2A4JPN8   A0A194PVV9   A0A182LWK9   A0A2W1BQ65   A0A0N1IQ38   A0A2W1BPZ1   A0A1Y9GKS9   A0NES8   A0A1Y9IRG1   A0A1Y9J0G9   A0A194R738   A0A2A4JTU1   A0A182LL19   A0A182J2M6   A0A2W1BWF3   A0A212F3C5   B0WNN7   A0A3S2M0F9   A0A2H1VWQ1   A0A1Y9GKT0   Q5TQY8   V5GZG1   A0A1Y9IRY8   Q16WF2   A0A182U0B4   A0A182QNT7   A0A194QDR0   A0A2H1W4S5   A0A1S4G3W5   A0A182HAK9   A0A182YP84   A0A182G2R0   A0A182HAK7   A0A182LL18   Q16ET6   A0A212ERQ2   Q7PI98   A0A182TWE4   A0A1Y9IS75   A0A1L8DQN1   Q16WF4   A0A1W1EGM5   A0A182YP82  

Pubmed

19121390    26354079    22118469    26227816    28756777    11342030    + More
15511222    27936116    12364791    14747013    17210077    20966253    17510324    26483478    25244985    28680679   

EMBL

BABH01005437    BABH01005438    NWSH01000819    PCG74065.1    KQ460779    KPJ12242.1    + More
KPJ12243.1    KQ459598    KPI94627.1    KPI94629.1    KPI94624.1    ODYU01001971    SOQ38904.1    KPJ12247.1    KPJ12245.1    KPJ12248.1    KPI94628.1    KPI94632.1    KPJ12246.1    KPI94633.1    JN033714    AEW46867.1    JN033728    AEW46881.1    RSAL01000077    RVE48784.1    KPJ12249.1    AGBW02011758    OWR46180.1    AGBW02008847    OWR52398.1    OWR52397.1    KPI94630.1    KPJ12244.1    JTDY01005139    KOB67338.1    JTDY01001400    KOB73970.1    KPI94631.1    AGBW02009344    OWR51063.1    OWR46178.1    BABH01035726    RSAL01000019    RVE52748.1    JN033718    AEW46871.1    KZ150146    PZC72895.1    ODYU01004710    SOQ44881.1    KZ150738    PZC70347.1    NWSH01000883    PCG73724.1    NWSH01000679    PCG74847.1    AGBW02008931    OWR52151.1    ODYU01004903    SOQ45256.1    ODYU01011923    SOQ57942.1    PCG73727.1    PCG73725.1    AF052729    AAC06038.1    BABH01014157    KQ459875    KPJ19634.1    BABH01016738    PCG73728.1    KQ459601    KPI93701.1    NWSH01001860    PCG69887.1    SOQ45257.1    AGBW02009638    OWR50268.1    ODYU01004836    SOQ45125.1    KPI93700.1    BABH01020023    BABH01020024    KQ458761    KPJ05206.1    PCG73726.1    KQ459589    KPI97521.1    AXCM01009805    KZ149936    PZC77128.1    KQ459993    KPJ18573.1    PZC77129.1    APCN01002262    AAAB01008960    EAU76599.1    KQ460870    KPJ11681.1    NWSH01000598    PCG75431.1    PZC77130.1    AGBW02010585    OWR48224.1    DS232013    EDS31873.1    RSAL01000086    RVE48281.1    SOQ45255.1    EAL40075.2    GALX01002583    JAB65883.1    CH477568    EAT38910.1    AXCN02000455    KQ459144    KPJ03597.1    ODYU01006202    SOQ47842.1    JXUM01031354    KQ560919    KXJ80350.1    JXUM01040976    KQ561266    KXJ79155.1    JXUM01031352    KXJ80348.1    CH478582    EAT32750.1    AGBW02012985    OWR44134.1    EAA44227.3    GFDF01005306    JAV08778.1    EAT38908.1    LT635664    SGZ49394.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000283053    UP000007151    + More
UP000037510    UP000075920    UP000075883    UP000075840    UP000007062    UP000075903    UP000076407    UP000075882    UP000075880    UP000002320    UP000008820    UP000075902    UP000075886    UP000069940    UP000249989    UP000076408   

PRIDE

H9JLY4    H9JLY5    H9JXB3    H9IZH5    H9JMQ9    H9J7W0    + More

Pfam

PF00232   Glyco_hydro_1        + More
PF07782   DC_STAMP

Interpro

IPR018120   Glyco_hydro_1_AS        + More
IPR033132   Glyco_hydro_1_N_CS       
IPR017853   Glycoside_hydrolase_SF       
IPR001360   Glyco_hydro_1       
IPR012858   DC_STAMP-like       

SUPFAM

SSF51445   SSF51445       

ProteinModelPortal

H9JLY4   H9JLY5   A0A2A4JPS5   A0A194R3H3   A0A194R360   A0A194PMT2   + More
A0A194PPG9   A0A194PPG4   A0A2H1VF65   A0A194R3H6   A0A194R4S7   A0A194R365   A0A194PNR8   A0A194PMT8   A0A194R8P7   A0A194PNS3   G9F9G9   G9F9I3   A0A3S2PE71   A0A194R400   A0A212EXF5   A0A212FF90   A0A212FF93   A0A194PU18   A0A194R3Z4   A0A0L7KVS3   A0A0L7LEZ3   A0A194PMG8   A0A212FBG8   A0A212EXF2   H9JXB3   A0A3S2NZ22   G9F9H3   A0A2W1BGQ3   A0A2H1VVL0   A0A2W1BA28   A0A2A4JQ50   A0A2A4JS29   A0A212FEI2   A0A2H1VWZ6   A0A2H1WY61   A0A2A4JNV2   A0A2A4JNT8   O61594   H9IZH5   A0A194RQF8   H9JMQ9   A0A2A4JPU6   A0A194PJU3   A0A2A4JCQ8   A0A2H1VWN4   A0A212F963   A0A1Y9IW90   A0A2H1VWC6   A0A194PRE4   H9J7W0   A0A194QNZ7   A0A2A4JPN8   A0A194PVV9   A0A182LWK9   A0A2W1BQ65   A0A0N1IQ38   A0A2W1BPZ1   A0A1Y9GKS9   A0NES8   A0A1Y9IRG1   A0A1Y9J0G9   A0A194R738   A0A2A4JTU1   A0A182LL19   A0A182J2M6   A0A2W1BWF3   A0A212F3C5   B0WNN7   A0A3S2M0F9   A0A2H1VWQ1   A0A1Y9GKT0   Q5TQY8   V5GZG1   A0A1Y9IRY8   Q16WF2   A0A182U0B4   A0A182QNT7   A0A194QDR0   A0A2H1W4S5   A0A1S4G3W5   A0A182HAK9   A0A182YP84   A0A182G2R0   A0A182HAK7   A0A182LL18   Q16ET6   A0A212ERQ2   Q7PI98   A0A182TWE4   A0A1Y9IS75   A0A1L8DQN1   Q16WF4   A0A1W1EGM5   A0A182YP82  

PDB

5CG0     E-value=2.83103e-150,     Score=1365

KEGG

101742223    K01229 lactase-phlorizin hydrolase [EC:3.2.1.108 3.2.1.62] | (RefSeq) lactase-phlorizin hydrolase-li

GO

GO:0004553   GO:0005975   GO:0008152   GO:0016798   GO:0016021   GO:0008422   GO:0007608   GO:0016020   GO:0008270   GO:0005515   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

PANTHER

PTHR10353  

Length:

522

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.0273799999999

Exp number, first 60 AAs:

19.95739

Total prob of N-in:

0.94590

POSSIBLE N-term signal

sequence

inside

1  -  20

TMhelix

21  -  38

outside

39  -  522

 

 

Pi

161.833177

Theta

128.732694

Tajima's D

0.514757

CLR

0.015139

CSRT

0.51852407379631

Interpretation

Uncertain