SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07100
Pre Gene Modal
BGIBMGA010535
Annotation
PREDICTED:_igLON_family_member_5-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.529
 

Sequence

CDS
ATGGGCCCTATCGTGAGCGGAGCCAGACCCGTTTTATGGCTATCTCTTCTGCATGGATTCTTTTTCCTCGTCGCTGACTCTGGTACGGAGTCTCCCGAAGGCACAACAACAGACATGTCTTCGCGACAGTTTCGTGCTGAGTTCCTACACGAGTGGCAAGGGTCTCCGGATGCGCCATACTTCGATCCGGGTACGCCGAAGAATATTACTGGACTGGTCGGTCATCCCGTGAGGCTACTCTGCAGGGTTAAGAACTTGAAGAATAGGACCGTATCATGGGTGAGGCATCGAGATATCCATTTGCTGACTGTGGGACGATATACTTACACGTCGGATCAACGGTTCGAGGCACAACACAAGCCGCGCTCCGAGGAGTGGGCACTTCGAATCCGCAGTCCACAGCGACGCGACTCCGGCCAGTACGAGTGTCAGATCTCGACCACACCACCCATCGGACACGCTGTCTTCCTCAATATTGTAGAACCTGAGACAATAATATCGAGCGGTCCCGAGCTGTTTATCCAAGCCGGCTCCACGATTAACCTGACATGCACTGTTCGTCACACGCCGGAACCGCCAACTTCCATAACTTGGACTCACGGAGACCAGATAATAAACTTTGATTCTGCTCGCGGTGGAATATCGCTGGTAACTGAAAAGGGACTTAAAAGTACTAGTCGATTGCTGGTCCAAAGGGCTAGAGGTCAAGATGCCGGAGTGTACACTTGTGGACCAAACAACGCCCCTTCCTCGTCAACAAGAGTTCACGTTCTGTCCGGCGAACATCCTGCGGCAATGCAACAAGGCTCAGCAAGATCGACCCTAGACAAAACAGCTTCAATACTATGCTGCTTATCAATGTTATACGTCCTTTCGAAGCCAACGTTCAACGCTCTCGAGTTCGGGACTTGA
Protein
MGPIVSGARPVLWLSLLHGFFFLVADSGTESPEGTTTDMSSRQFRAEFLHEWQGSPDAPYFDPGTPKNITGLVGHPVRLLCRVKNLKNRTVSWVRHRDIHLLTVGRYTYTSDQRFEAQHKPRSEEWALRIRSPQRRDSGQYECQISTTPPIGHAVFLNIVEPETIISSGPELFIQAGSTINLTCTVRHTPEPPTSITWTHGDQIINFDSARGGISLVTEKGLKSTSRLLVQRARGQDAGVYTCGPNNAPSSSTRVHVLSGEHPAAMQQGSARSTLDKTASILCCLSMLYVLSKPTFNALEFGT

Summary

EMBL
NWSH01002656    PCG67732.1    KQ459603    KPI92897.1    BABH01005427    BABH01005428    + More
KQ461194    KPJ06933.1    AGBW02013172    OWR43914.1    ODYU01009757    SOQ54398.1    KPJ06935.1    AGBW02010791    OWR47706.1    KPI92895.1    KQ971312    KYB29210.1    AAAB01008987    EAA00989.5    ATLV01019094    KE525262    KFB43623.1    APCN01000815    CH477382    EAT42180.1    AXCN02001484    AXCN02001485    QOIP01000001    RLU27302.1    KQ434814    KZC06827.1    NNAY01006059    OXU16465.1    KQ981799    KYN35656.1    ADTU01003391    ADTU01003392    ADTU01003393    ADTU01003394    ADTU01003395    ADTU01003396    ADTU01003397    ADTU01003398    ADTU01003399    ADTU01003400    CH379064    KRT06622.1    KQ982934    KYQ49126.1    JR041747    AEY59502.1    CH933813    KRG07402.1    GEDC01004724    JAS32574.1    AE014298    AY060637    AAF48372.2    AAL28185.1    AHN59709.1    CM000366    EDX17900.1    CM000162    EDX01677.1    KRK06287.1    KRK06288.1    KRK06289.1    KRK06290.1    KRT06621.1    GEDC01020047    JAS17251.1    CP012528    ALC49291.1    CH480835    EDW48872.1    CH954180    EDV47101.1    OUUW01000015    SPP88696.1    CH940651    KRF82033.1    KRF82034.1    KRF82036.1    KRF82038.1    KRF82039.1    KRF82040.1    CH902625    EDV35078.1    GEDC01012553    GEDC01003178    JAS24745.1    JAS34120.1    JRES01000902    KNC27443.1    CH916370    EDW00301.1    GEDC01015655    JAS21643.1    CVRI01000065    CRL05743.1    GL435242    EFN73636.1    KQ414868    KOC59947.1    KK107159    EZA56660.1    ADTU01003373    ADTU01003374    ADTU01003375    ADTU01003376    ADTU01003377    ADTU01003378    ADTU01003379    ADTU01003380    KQ981567    KYN39797.1    GFXV01003191    MBW14996.1    GGMR01005205    MBY17824.1    GGMS01003322    MBY72525.1    GBXI01010536    GBXI01005761    GBXI01002155    JAD03756.1    JAD08531.1    JAD12137.1    CRL05739.1    KQ977622    KYN01333.1    KRK06291.1    KQ979074    KYN23061.1    KQ414648    KOC66353.1    KRF82032.1    GGMS01010680    MBY79883.1    UFQT01001458    SSX30649.1    GEDC01021959    JAS15339.1    GECZ01004098    JAS65671.1    GEBQ01023602    JAT16375.1    RLU26716.1    UFQT01000229    SSX22073.1    DS235306    EEB14531.1    GL435845    EFN72565.1    KQ977279    KYN04398.1    ADTU01014523    ADTU01014524    ADTU01014525    KK107361    EZA51992.1    QOIP01000005    RLU23052.1   
Pfam
PF07686   V-set        + More
PF00047   ig
PF07679   I-set
Interpro
IPR013106   Ig_V-set        + More
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR037448   Zig-8       
IPR013151   Immunoglobulin       
IPR013098   Ig_I-set       
SUPFAM
SSF48726   SSF48726       
Gene 3D
PDB
6EG0     E-value=1.71594e-49,     Score=493

Ontologies

Topology

SignalP
Position:   1 - 27,         Likelihood:  0.903239
 
 
Length:
303
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.83223
Exp number, first 60 AAs:
0.7802
Total prob of N-in:
0.04314
outside
1  -  303
 
 

Population Genetic Test Statistics

Pi
173.176304
Theta
155.078533
Tajima's D
0.239396
CLR
0.372535
CSRT
0.435578221088946
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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