Silkworm Genome Informatics Database

Gene

KWMTBOMO07098

Pre Gene Modal

BGIBMGA010534

Annotation

hypothetical_protein_[Piscirickettsia_salmonis]

Location

Bomo_Chr12(+):4409522-4415267 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.388

CDS

ATGAGACATACTGAAACTCCTACTACACGGAGGCGACCGTCTCGAGATGATTCTCGTAATCGAAAACGACGTGCTTTCGGAAGGTCTCGCGATCACGGAGATGATAGACAGAATCGCGATACGAACGATAGAGGTCGTACTTCACGGGATGGCTTGCGGGTCCGAGATCAGCGTGATTCTCGCAGTACTGATGTGCGTCGGTCACGTGCTCGGGTTAGGCGCGGGTCGCGTAGTAGGGACCGCTCTCGTAGTGCCCGTCGCGGGATGTCGAGATCGCGCTCGCGCACGATTGAACCTGTCGCGACACGTTCTAACAATAAGGCGCGCGCTGAACAGACCACCGATATTCTACGGACAGTTACGACTCCCACGTCGAATATAGTTGGTTCGAGACAAGGCTGCGTAGAATCTAACTACGCCAACATATTATTTGAGGCGATGAACACGACCTCTGATAAATATTCTAGCTACGCTGAATATGCTCGTCGTACCTTACTGCGTTTAAGGATAATCCAGGGGCTAAGCGACGATTTAAGGACCCTAATAGTCGTACGTGGTATTGATAACGCACAAATCCGCGCCGCAGCTGCTAACGCTAGCCTGACTCCCGACACCATCGTTTCATTCCTTTCTATCTATACCAAGCCTTCAGCTGAAAGACGGGACAAGGTACTTGAACTCATAGATGGTATTCCAACAGACGTACTCATAGATAGTGGAGCCCTCGATGTGTCTCTCATTTCTTCCGATGTTTTGAAGTATTTTACGTGTCAGCCTAAGCCGAGACGTTGTGTGTTAAAAGGTCTTAGCGATAAGGAGATAGTTGCAACGTCTTACGTCACGCTCACTGTAGAGTTTAGCGACATCTCGATCGAAGTAGATTTAGTAGTAGTTCCGGCACCTTTTATGAATGCCCCTGTCATAATAGGAACTGACGTGTTGAACCGTGACGGAATTACTTATGTTCGGACTAAAGATAAACAATATCTCACGCGTACCGACGTAGTTAATAAGGAGGTTAGTACTGTTGGGGTAAGCGAGCAGTTTAAAGTAAATACACGTCTACAGGGTGCAGAGCGAGAAAGCCTCATGTCCGTCATCAATGAATTCTCTCAATTTTTGATAACGAGTACCGCCGTGACTACAGTCCAAACGGGAGAGATGGAGATAAAGCTTACCGACCCCACACCTGTCGTTTACAAACCATATCGGCTTTCATATTCCGAAAAACTTAAAGTACGGGAAATAGCTCAAGACCTTTTAGACAAAGGAGTTATTAGGCGTTCTAACTCTGAATACGCGAGTCCAATAATACTTGTAAGAAAACGTGATGGTTCAGATAGACTGTGTGTGGATTTTAGAGCTCTTAATCGCATCACTGTAAAAGATCGCTACCCTCTTCCATTAATTGACGACCATATCGATAGGTTAGGTAGCAATAGGTTCTTTTGCTGTCTTGATATGGCTACGGGGTTCCATCAAATTCCCTTAAGGGAGGAATGCATTCATTTAACAGGGTTTGTGACGCCAGAGGAACATTTCGAATATGTTAAGATGCCTTATGGCCTAGCTAATTCTCCAGTAGTTTATCAGCGGATTATTAATAATACCCTCCGTGCACACATAGATAAAGGGAATGTTCTGGTCTATGTCGATGACGTACTCCTTCTTAGCAACTCCGTAGATGAGGGGATTGAGCTTTTACGCAGAGTGCTCAGAACTCTCACAAATGCTGGTTTTTCTATTAATTTGGGCAAATGTTCATTCCCGGTCACGGAAGTTGAATATCTGGGTAGACTTATAACTCAAGTAGGTCAAGACGCAAGGCTGCTTTGTTATGTACCTAAAGGTCATCGTCTTAGTCTATTGAGAGTGTTTCATGATGAACATGAACACATTAGCACAGAGAAAACTCTTGACCTCATTCTACGACATTTCTGGTTCCCAGGCCTCAGACGATTCGTTTTCAAGTATGTCTCCCATTGTCTTGTGTGCATCTCTCCAAAAAGAGTTCCCCGAGCTCCTTTACAAAACATAACCTCTTGGGAAAAACCCGATACTCCCTTCGACATAATCCATGTTGACGCCTTGGGACCGTTACCTGTCTCAGGAGGGTATAAATTCGTCCTTATTATTGTAGACGCTTTCACGAAGTATACACTCCTCTATCCTATTTGTCGACAAGACTCTATAGAACTTAAACGTGTCATGACTCAGGCTATTTCTTTGTTTGGAGTGCCTAAACTTATGATTACCGACAAAGGACGTATGTTCGAATCTATTGAATTCGTCACATGGATCAACGAATTGGGCTGTGATCTACATTACATCACGCCGGAGATGCATCGGTCCAATGGTCAGGCGGAGCGGTACATGCGGACTCTCCTCAATATGCTACGCATACAAGCCAACCACAGAAATCAACAGTGGTCTGAGACCTTATGGAGACTACAGCTGGTGCTAAACATCACAAAACAGAAGACTACACGAGCTTCCCCTATGAATCTCCTTATAGGCACAGAATCTACAACTCCTGTGATCAGAGCGCTGGTACGAGATGTAGCGATCGAGGGTGGGGCCTCTAACAGAGAAGCCCTGCGTGAAATCACAAGGAGTAGAACTCGTGAACTTCTCCGACGTAACCAAGGCAGACAAGATGAGCGAGCCAATCAAGGACGACGTGCGCCGCGCCAGTTCAAAGTTGATGACCTGGTATATGTCATCAAAAACTCTCAGTCGGCAGGTAAACTTGATTCCGGCATGCGTGGCCTGTATAAGGTTGTCGAAATTCTACCCAGTGGACGCTATACTCTACGGCTACTCAGCGGCAGTTATGGCAAAACTACGCAAGCAGCTGCACAATATATGGTGCCGTGGCGGGGCGAGTGGACCCCTGAGACATGTGCTGCCTTCTTTGAGAACGATGATGATGAGGACACCATACAATCGGAGCCCGTTCCTTTGACCGGTCTGTCTATGCCCTTGCTCGATGACTACGTGGAGGCTAACCCGCAGATCTCTCCAGTAGCGGGACCCAGCGGAACCCAAAGGATTTGTGTCGAGGACGACTCAACGTCAGGAGAGGCCGTGTAA

Protein

MRHTETPTTRRRPSRDDSRNRKRRAFGRSRDHGDDRQNRDTNDRGRTSRDGLRVRDQRDSRSTDVRRSRARVRRGSRSRDRSRSARRGMSRSRSRTIEPVATRSNNKARAEQTTDILRTVTTPTSNIVGSRQGCVESNYANILFEAMNTTSDKYSSYAEYARRTLLRLRIIQGLSDDLRTLIVVRGIDNAQIRAAAANASLTPDTIVSFLSIYTKPSAERRDKVLELIDGIPTDVLIDSGALDVSLISSDVLKYFTCQPKPRRCVLKGLSDKEIVATSYVTLTVEFSDISIEVDLVVVPAPFMNAPVIIGTDVLNRDGITYVRTKDKQYLTRTDVVNKEVSTVGVSEQFKVNTRLQGAERESLMSVINEFSQFLITSTAVTTVQTGEMEIKLTDPTPVVYKPYRLSYSEKLKVREIAQDLLDKGVIRRSNSEYASPIILVRKRDGSDRLCVDFRALNRITVKDRYPLPLIDDHIDRLGSNRFFCCLDMATGFHQIPLREECIHLTGFVTPEEHFEYVKMPYGLANSPVVYQRIINNTLRAHIDKGNVLVYVDDVLLLSNSVDEGIELLRRVLRTLTNAGFSINLGKCSFPVTEVEYLGRLITQVGQDARLLCYVPKGHRLSLLRVFHDEHEHISTEKTLDLILRHFWFPGLRRFVFKYVSHCLVCISPKRVPRAPLQNITSWEKPDTPFDIIHVDALGPLPVSGGYKFVLIIVDAFTKYTLLYPICRQDSIELKRVMTQAISLFGVPKLMITDKGRMFESIEFVTWINELGCDLHYITPEMHRSNGQAERYMRTLLNMLRIQANHRNQQWSETLWRLQLVLNITKQKTTRASPMNLLIGTESTTPVIRALVRDVAIEGGASNREALREITRSRTRELLRRNQGRQDERANQGRRAPRQFKVDDLVYVIKNSQSAGKLDSGMRGLYKVVEILPSGRYTLRLLSGSYGKTTQAAAQYMVPWRGEWTPETCAAFFENDDDEDTIQSEPVPLTGLSMPLLDDYVEANPQISPVAGPSGTQRICVEDDSTSGEAV

Uniprot

NA

ProteinModelPortal

NA

PDB

4OL8 E-value=1.61591e-32, Score=352

KEGG

NA

GO

GO:0003676 GO:0015074 GO:0007608 GO:0016020 GO:0008270 GO:0005515 GO:0004319 GO:0004320 GO:0016295 GO:0016296

Length:

1030

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0378

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00125

outside

1 - 1030

Pi

2.001161

Theta

196.954096

Tajima's D

1.281731

CLR

14.282243

CSRT

0.737063146842658

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics