Gene

KWMTBOMO07096

Annotation

PREDICTED:_olfactory_receptor_6_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr12(+):4234504-4238935      View in EpiBrowser

Full name

Odorant receptor      

Location in the cell

PlasmaMembrane   Reliability : 4.937

CDS

ATGGTGGGGATACACTTTCCCGAAATACTTTTTATAATATTGAACTACCAAACGATAGATAAGTCAGTATTCATTATTGCAATCACAATAACACCGCTGGGAGCGCTTGTTGGGATCAAAGCTGAATCAGCAAAAGCTGAATGCTACGTCAATTTAATGAAGAATTTCATGGATAAAGTTCACATTCACAGTATTTATCGTAAAAACGAAAACAATGAATTCGTAAAAAAGAAAGTATTACAAATCGAGCGAGTGTCACGCTTCACTGCGTATTTCCTCGTAATTTTGATAGCGATCAATTGTCTATCTTGGATGCTGAAACCCACCTTGCACAACATAAAGCATTTCGAGGAAATCATGAACAAGTCCATGGAATTCCAATACTATATTTATTTTTGGACGCCATTGGATTATAAATACAATTTGAGGGACTACATAATAATACACACGTTGTGTATATACTTGGGCGCGACTGCTGTAACGGTTATTGTGACATTCGATATATTTAACTTCATTGCAGTTTTCCATGTAGTTGCGCACATCCAAATATTGAAAAACAATGTAAAATCGAACTGGTCGGATGATTTCAATGAAAGCGAGAAAAAGGGGTATTTGGTGAGCATACTGGAATATCACGCGTATATTATAAGAATTTTCGGTGAAGTGCAGTCAGCATTTGGGCTAAACGTAGCATCGAATTATCTTCAGAACTTAATTGAGGATGGCTTGTTTTTGTATCAAATCATGAACGGGGAAAAAGAAAATGTTTTGATGTACGGCTTAATGATAATTTTATATTTAGGAGGTTTGATTTTTCTATCCATTGTGCTGGAGGAAATACGTCGTCAGGTTTGTATGATTTATCAATTTGTTTATATTTTCTATTACCTTGTCATAAATCGTAAAAAATTATGGTAA

Protein

MVGIHFPEILFIILNYQTIDKSVFIIAITITPLGALVGIKAESAKAECYVNLMKNFMDKVHIHSIYRKNENNEFVKKKVLQIERVSRFTAYFLVILIAINCLSWMLKPTLHNIKHFEEIMNKSMEFQYYIYFWTPLDYKYNLRDYIIIHTLCIYLGATAVTVIVTFDIFNFIAVFHVVAHIQILKNNVKSNWSDDFNESEKKGYLVSILEYHAYIIRIFGEVQSAFGLNVASNYLQNLIEDGLFLYQIMNGEKENVLMYGLMIILYLGGLIFLSIVLEEIRRQVCMIYQFVYIFYYLVINRKKLW

Similarity

Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.

Uniprot

Q5FBD7   I3Y3H9   A0A0P1JD66   A0A1S5XXK8   A0A1B3P5R2   A0A223HD00   + More
A0A0B5CUR4   A0A0B5GR56   A0A146JW21   H9A5N3   A0A1B3P5N5   A0A2K5B186   A0A0K8TVE9   A0A097ITU1   A0A097IYN0   A0A345BEV0   E2S042   J3S8L5   E2S044   A0A0C4UUE3   J3SFR7   M4NL06   D3J5H9   C1PHB2   A0A2Z4EY63   A0A386H9G5   A0A2Z4EY58  

Pubmed

15692016    22646846    23950722    27538507    28150741    22363688    + More
27006164    26017144    25252791    29727827    21526121    22891317    20084285    29894821   

EMBL

AB186508    BAD89570.1    JQ794809    AFL70814.1    LN885109    CUQ99398.1    + More
KY399259    AQQ73490.1    KX655965    AOG12914.1    KY283600    AST36260.1    KM678304    AJE25877.1    KM892378    AJF23793.1    KX084460    GEDO01000049    ARO76415.1    JAP88577.1    JN836683    AFC91723.2    KX655968    AOG12917.1    KX774368    ASA39903.1    GCVX01000180    JAI18050.1    KM597205    AIT69882.1    KM655541    AIT71991.1    MG816589    AXF48774.1    AB594449    BAJ22889.1    JN169141    AFK30402.1    AB594451    BAJ22891.1    KJ830834    AIZ94614.1    JN169142    LC002700    AFK30403.1    BAR43448.1    JX910531    AGG91648.1    GQ844881    ADB89183.1    AB467323    BAH57978.1    MG913132    AWV67921.1    MG546598    AYD42221.1    MG913134    AWV67923.1   

PRIDE

Q5FBD7   

Pfam

PF02949   7tm_6

Interpro

IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

Q5FBD7   I3Y3H9   A0A0P1JD66   A0A1S5XXK8   A0A1B3P5R2   A0A223HD00   + More
A0A0B5CUR4   A0A0B5GR56   A0A146JW21   H9A5N3   A0A1B3P5N5   A0A2K5B186   A0A0K8TVE9   A0A097ITU1   A0A097IYN0   A0A345BEV0   E2S042   J3S8L5   E2S044   A0A0C4UUE3   J3SFR7   M4NL06   D3J5H9   C1PHB2   A0A2Z4EY63   A0A386H9G5   A0A2Z4EY58  

KEGG

692473    K22984 odorant receptor | (RefSeq) Or-6, BmOR-6; olfactory receptor 6

GO

GO:0007165   GO:0016021   GO:0004984   GO:0005886   GO:0005549   GO:0007608   GO:0016020   GO:0008270   GO:0005515   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

PANTHER

PTHR21137  

Subcellular location

Cell membrane  

Length:

305

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

111.79008

Exp number, first 60 AAs:

19.33679

Total prob of N-in:

0.08748

POSSIBLE N-term signal

sequence

outside

1  -  21

TMhelix

22  -  39

inside

40  -  83

TMhelix

84  -  106

outside

107  -  144

TMhelix

145  -  179

inside

180  -  254

TMhelix

255  -  277

outside

278  -  281

TMhelix

282  -  299

inside

300  -  305

 

 

Pi

36.560295

Theta

40.817613

Tajima's D

-1.199087

CLR

0.176027

CSRT

0.103194840257987

Interpretation

Uncertain