Gene

KWMTBOMO07095

Pre Gene Modal

BGIBMGA004264

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_G_member_4-like_[Amyelois_transitella]

Location

Bomo_Chr12(-):4107165-4122063      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.586

CDS

ATGACTGAAACATCCACAACAAACATGGTGTCAGGTGTGGGGTTCCTGCCACTTTTACCCAGTATGGACTTCAAAGGTAACCTTGCCGAAAATTTCAAAATGTATCGTCAAAGGTTGGAGATATATTTGTCTGCTAATGGCCTTGATGACGCCAAAGACAAAAGAAAAATATCAATTCTGCTGAATTTTATTGGCGAAAACGGAATCAAAATCTACAATTCTTTCAACTTAAACGCATCTGAATCACATACTTTTGAACACGTGCTCAAAAAGTTTGAAGCGTACTTTGAACCAAAGAAAAGTCTAACTATAGCAAGGAACGAGTTTTTTACTGTTACACAAGATGAAGACAGGTTGGAGGATTACTTTCAAAGAGTAATAAATCTCGGTATTCAATGCGAACTTGGAGATCTCAGAGAAGGGTTGACAGTGGGAAAGATAATTTCAGGGTTAGACTCCAAATATAATAATCTCAAAACACGATTAATGTCGGAAGACGATAGTAAATTAACATTAGATTATGTTATGAAATACTTACTGAGTGCCGAAACCTCTAGAAAATATATAGAAGAAAAAACAAATTCAAAGGACAGCGATGAGTCCTCCATCCTATATGTTAATAAAAAATCAATAAGGAACTGTAGAAACTGTGGCACATCTCACAATATAAATAAATGCCCAGCATACGGCAAAGAGTGTCTGAAGTGCAAGAAACTTAACCATTTTAGTAAAGTATGCAGATCAGCCAAGAAACCAAATTTTTATCAAAAGCAAGTCAATGTCCTTGAGGATCCAGATAAGAACAAAGAGGATGAAGCTGAAGGAGATCTCTTTGTTGGTTATGCAGGCAATGAAATAATTCAAGATTTTATAGTCAATAACATCAAAATTCCCATCAAAATGGACACTGGAGCTGCATGCAACGTGATTGGGAGCGAAGTATGTAAATTAATTAATATAAAAACCTCAGAAATTTTGCCCTGTGACAAAAAGGTCATTCAACTAGATGGAAAATGTGTACCAGTCAGGGGTACTTGTTGGTTGAATATTATTCATCCTAATAGCAAAAAATACACTGTTAAGTTCATCATAATAGAAGGAAATATTCCTACTTTACTCGGGTGCAGAACATGTTTAACTTATAATTTTATTTCAGCAAACACTAACCTTGTTAACATACATAATGTGACAGTTGGAAAAGACACAACATTCAATTTAATAAAAAAATTAAAAAATGATTTCAGTGAGCTCTTCAGTGGAGGTCTTGGTTGCATTCCTGGCACAGTAAACATTCAGCTAAGTAGTGAAGCAGTCCCTACAGTGCAGGCTGCTAGACGTGTTCCATTTGCATTAATGCCTGAACTGCGCCGAGAATTAGATCATATGGAAGCAATAGGGGTTATTGAAAAGGTAGATAAGCCCACCAAATGGGTAAATAATATAGTGCCTGTTAGAAAAACGAATGATGATATACCTGATATTGTATTAGATAATAGCATGTGTCAGCCTTCAGCTAAATATGTTATACAAGAGCCTAGCTTAGAAAAAATAGTATGTGGAAGTAACATGGCAACCCAGGCGAGTCCAGCAAGATCACGGGAGAGAAGGGAGCAGAGAATACTTCAAAGCGTCTCCGGAGAGTTTCGTTCAGGAGAGCTGACATGTATACTAGGACCTTCGGGGGCTGGAAAGTCTACTTTACTCAACATCTTAGCAGGATACACGTTGAACGGCGTCACCGGACGTATATCAGTGAACGGACACGTGCGAGACATGAGGGTCTTCAAGAAGCTGAGCTCGTACATCATGCAGGATGATCTGCTGCAGCCAAGACTGACCGTGCAAGAGTCCATGTGGATCGCTGCTGATCTGAAACTCGGCAAGGAACTGGGAAAGCCGGAGAAGGAACTCATTATTGAAGAAATTCTACAAACACTAGGTCTGTGGGATCACAGAGACACAAGGTCTGAAAAACTGTCTGGAGGACAATCGAAACGTCTCACTGTCGCCCTGGAGCTGGTCAACAATCCACCCATCATATTTCTGGATGAGCCTACCACGTGCGTATACTCTTCCACAATTACTGTATAG

Protein

MTETSTTNMVSGVGFLPLLPSMDFKGNLAENFKMYRQRLEIYLSANGLDDAKDKRKISILLNFIGENGIKIYNSFNLNASESHTFEHVLKKFEAYFEPKKSLTIARNEFFTVTQDEDRLEDYFQRVINLGIQCELGDLREGLTVGKIISGLDSKYNNLKTRLMSEDDSKLTLDYVMKYLLSAETSRKYIEEKTNSKDSDESSILYVNKKSIRNCRNCGTSHNINKCPAYGKECLKCKKLNHFSKVCRSAKKPNFYQKQVNVLEDPDKNKEDEAEGDLFVGYAGNEIIQDFIVNNIKIPIKMDTGAACNVIGSEVCKLINIKTSEILPCDKKVIQLDGKCVPVRGTCWLNIIHPNSKKYTVKFIIIEGNIPTLLGCRTCLTYNFISANTNLVNIHNVTVGKDTTFNLIKKLKNDFSELFSGGLGCIPGTVNIQLSSEAVPTVQAARRVPFALMPELRRELDHMEAIGVIEKVDKPTKWVNNIVPVRKTNDDIPDIVLDNSMCQPSAKYVIQEPSLEKIVCGSNMATQASPARSRERREQRILQSVSGEFRSGELTCILGPSGAGKSTLLNILAGYTLNGVTGRISVNGHVRDMRVFKKLSSYIMQDDLLQPRLTVQESMWIAADLKLGKELGKPEKELIIEEILQTLGLWDHRDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTCVYSSTITV

Uniprot

A0A2G8L9H5   A0A3P8S414   A0A3B1JKR1   A0A3P8Q6C6   A0A2G8KKG5   A0A1A8UGA0   + More
A0A3P9M8I3   A0A2S2N8I3   A0A3B3HLX7   X1WTY2   A0A069DZS8   A0A069DY08   A0A146SN99   A0A3Q0JFZ1   A0A146TAZ6   A0A3P9HXP1   A0A1Y1MUX5   A0A1Y1MCJ7   A0A2G8LMB1   A0A0A9Z4Y4   L7LWW6   A0A023EY30   A0A3P8RKT7   A0A146LC45   A0A1Y1M671   A0A1S3ICH8   A0A3P8RHF8   A0A3P9AYU2   A0A2G8KHQ8   A0A3P8PD24   A0A1S3HTD1   A0A075EIL5   A0A1S3DNR0   A0A1S3DM37   A0A1S3DH71   A0A1Y1JV53   A0A2G8KFU3   A0A3B3I1S4   A0A0J7K756   A0A2S2NI46   A0A3P9LZF9   A0A3P9K9H2   A0A1Y1NHV7   A0A293LIZ7   A0A3B3C0E1   W4YTX1   A0A2G8K365   A0A1Y1K861   A0A147BN28   A0A3Q0J4U3   A0A3P8QAD1   A0A1Y1NDC5   I3KYE2   A0A3B3H7E4   A0A1A8JWC8   W4YGV7   J9LDY4   A0A1Y1K7Z4   A0A1A8QDB9   A0A2B4S589   W4Y1E4   A0A2B4S229   A0A1A8QB08   A0A1A8N283   A0A1A8DQM9   A0A1A8P545  

Pubmed

29023486    25329095    17554307    26334808    28004739    25401762    + More
25576852    25474469    26823975    25186727    25201971    29451363    29652888   

EMBL

MRZV01000161    PIK56894.1    MRZV01000519    PIK48493.1    HADY01023773    HAEJ01006887    + More
SBS47344.1    GGMR01000868    MBY13487.1    ABLF02013930    ABLF02013934    GBGD01000115    JAC88774.1    GBGD01000119    JAC88770.1    GCES01104253    JAQ82069.1    GCES01096219    JAQ90103.1    GEZM01020000    JAV89472.1    GEZM01035137    JAV83383.1    MRZV01000033    PIK61397.1    GBHO01004090    JAG39514.1    GACK01009641    JAA55393.1    GBBI01004745    JAC13967.1    GDHC01013957    JAQ04672.1    GEZM01041944    JAV80090.1    MRZV01000576    PIK47528.1    KF319019    AIE48224.1    GEZM01102055    GEZM01102054    GEZM01102053    GEZM01102051    JAV52011.1    MRZV01000618    PIK46835.1    LBMM01012476    KMQ86207.1    GGMR01004179    MBY16798.1    GEZM01001973    JAV97431.1    GFWV01003962    MAA28692.1    AAGJ04045137    MRZV01000935    PIK42441.1    GEZM01089256    JAV57584.1    GEGO01003204    JAR92200.1    GEZM01011167    JAV93617.1    AERX01070080    HAEE01004368    SBR24388.1    AAGJ04164197    ABLF02010707    GEZM01089257    JAV57582.1    HAEI01005002    SBR91338.1    LSMT01000199    PFX23692.1    AAGJ04066141    LSMT01000218    PFX23103.1    HAEG01011680    SBR90379.1    HAEF01021833    SBR62992.1    HADZ01002490    HAEA01007842    SBQ36322.1    HAEG01006212    SBR76132.1   

Proteomes

UP000230750    UP000265080    UP000018467    UP000265100    UP000265180    UP000001038    + More
UP000007819    UP000079169    UP000265200    UP000085678    UP000265160    UP000036403    UP000261560    UP000007110    UP000005207    UP000225706   

Pfam

PF00078   RVT_1        + More
PF17919   RT_RNaseH_2
PF00665   rve
PF17921   Integrase_H2C2
PF17917   RT_RNaseH

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR000477   RT_dom       
IPR001995   Peptidase_A2_cat       
IPR041577   RT_RNaseH_2       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR001878   Znf_CCHC       
IPR001969   Aspartic_peptidase_AS       
IPR041373   RT_RNaseH       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

A0A2G8L9H5   A0A3P8S414   A0A3B1JKR1   A0A3P8Q6C6   A0A2G8KKG5   A0A1A8UGA0   + More
A0A3P9M8I3   A0A2S2N8I3   A0A3B3HLX7   X1WTY2   A0A069DZS8   A0A069DY08   A0A146SN99   A0A3Q0JFZ1   A0A146TAZ6   A0A3P9HXP1   A0A1Y1MUX5   A0A1Y1MCJ7   A0A2G8LMB1   A0A0A9Z4Y4   L7LWW6   A0A023EY30   A0A3P8RKT7   A0A146LC45   A0A1Y1M671   A0A1S3ICH8   A0A3P8RHF8   A0A3P9AYU2   A0A2G8KHQ8   A0A3P8PD24   A0A1S3HTD1   A0A075EIL5   A0A1S3DNR0   A0A1S3DM37   A0A1S3DH71   A0A1Y1JV53   A0A2G8KFU3   A0A3B3I1S4   A0A0J7K756   A0A2S2NI46   A0A3P9LZF9   A0A3P9K9H2   A0A1Y1NHV7   A0A293LIZ7   A0A3B3C0E1   W4YTX1   A0A2G8K365   A0A1Y1K861   A0A147BN28   A0A3Q0J4U3   A0A3P8QAD1   A0A1Y1NDC5   I3KYE2   A0A3B3H7E4   A0A1A8JWC8   W4YGV7   J9LDY4   A0A1Y1K7Z4   A0A1A8QDB9   A0A2B4S589   W4Y1E4   A0A2B4S229   A0A1A8QB08   A0A1A8N283   A0A1A8DQM9   A0A1A8P545  

PDB

6FFC     E-value=1.60497e-16,     Score=213

KEGG

101741923    no KO assigned | (RefSeq) ATP-binding cassette sub-family G member 1-like

GO

GO:0015074   GO:0003676   GO:0004190   GO:0008270   GO:0005634   GO:0005524   GO:0016887   GO:0005515   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

Length:

696

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.38968

Exp number, first 60 AAs:

0.28581

Total prob of N-in:

0.01649

outside

1  -  696

 

 

Pi

259.154569

Theta

167.644185

Tajima's D

1.875419

CLR

0.02267

CSRT

0.859907004649768

Interpretation

Uncertain