Gene

KWMTBOMO07094

Annotation

PREDICTED:_ATP-binding_cassette_sub-family_G_member_4-like_[Amyelois_transitella]

Location

Bomo_Chr12(-):4080218-4087153      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.182

CDS

ATGGAAGTGCACCTACTGCGTCGGGAATACTTCAATCGCTGGTACAGCTTAAAGGCTTATTATGCTGCGCTGAGTTTTGCCACTATGCCTGCGATGACTTTACTTGGCCTCATATTCCTGGTTATAACGTATTTCATGTCAGGGCAGCTGCTAGAGTGGGAGAGGTTTACATTGTTCTCTATCAGCGGACTGCTCACGGGAATATGTTCCGAGGGCTTAGGTCTCGCCATAGGCGCAGCACTGAGTGTTACTAACGGCTCTATCGTCGGACCATCGATAGTGTCACCACTCCTGGTTCTCTGCTGCTACGGAATGGGTTTCGGTCCTTACATAGAGGGCACCATGCGCGCCCTAATGTCCGCCTCGTATCTGCGTTACGGTCTTTCCGGATTAACTTTATCCCTAGAGTCCGTAGTGTTTTACCGCATTTTGGATTTGAACAGCATGAAAGCTCATATACTGCACAACATGCACCAACCTAAGATTATAGAAAGGGGAGATTTCCTAAAGACTAGCTCGTTCGCTAGTTCTCCCATGGGGGACCAGACTACGCGTTTCTGA

Protein

MEVHLLRREYFNRWYSLKAYYAALSFATMPAMTLLGLIFLVITYFMSGQLLEWERFTLFSISGLLTGICSEGLGLAIGAALSVTNGSIVGPSIVSPLLVLCCYGMGFGPYIEGTMRALMSASYLRYGLSGLTLSLESVVFYRILDLNSMKAHILHNMHQPKIIERGDFLKTSSFASSPMGDQTTRF

Uniprot

A0A1D9C109   S4NIB2   A0A194PHU9   A0A194PIL7   A0A2A4JSF5   A0A2H1WKT2   + More
A0A212EYH0   N6UL09   N6TPJ2   A0A139WK45   U4UVY2   J3JWW1   A0A2R7WJI2   A0A2J7PSR5   A0A2J7R9W6   T1I3H7   A0A023F2D5   A0A0P4VIF7   A0A2R4FXE8   A0A0U9HZ98   A0A067R385   A0A067QKC2   A0A2P8YSB2   Q8MS57   Q9VTL3   Q8SXX6   A0A0J9RTT3   B4HEW3   B3NGY3   B4PFL8   A0A1W4VU95   B4HAI3   A0A1B6E8X1   A0A158V6Y6   B4KUR3   B3M4A1   A0A1B6DIR7   Q2LZ69   A0A3B0JZT0   A0A3B0JVM2   A0A1S4EI61   B4N0M2   B4N3B8   A0A3B0K6S5   B4GQS2   B4KFN7   A0A146M787   B4MDB5   A0A1B6CDE3   A0A1B6EE46   A0A1B6I4E0   J9JXC1   B4LCP8   A0A1W4X256   A0A0K8V5S5   A0A0M4EG47   A0A0T6ATZ0   W8C2Y8   A0A0A9YE03   A0A1B6DT64   A0A2P8Z045   A0A1B6DAM8   A0A2S2NDX0   B4J2J5   A0A2S2RAU7   B4JD50   A0A3R5USX7   A0A2S2QQM8   W8AXI7   A0A1B6G7Z6   A0A0A1XNQ2   W8B4R5   Q16NT8   A0A158V4U5   A0A034WRH9   A0A2H4TES4   A0A0K8VTK0   A0A1E1W184   B0WLD9   A0A0L0CDT2   A0A1Q3FNT7   J9JSX9   A0A1Q3FNC5   A0A1B6LXW2   A0A1Q3FNE6   A0A0M3QTZ8   A0A0K8WFN7   A0A034V8F4   A0A158V1B5   A0A0A1WY89   A0A1W4UQ15   A0A2S2PAR8   A0A2H4TES0   A0A2H8TW86   A0A0L7LFT1   A0A1B6DFY5   J9K4G9   A0A2S2QS91  

Pubmed

23622113    26354079    22118469    23537049    18362917    19820115    + More
22516182    25474469    27129103    24845553    29403074    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17994087    17550304    18057021    15632085    26823975    24495485    25401762    25830018    17510324    25348373    29121518    26108605    26227816   

EMBL

KX793137    AOY08602.1    GAIX01014139    JAA78421.1    KQ459603    KPI92892.1    + More
KPI92893.1    NWSH01000663    PCG74941.1    ODYU01009275    SOQ53576.1    AGBW02011531    OWR46507.1    APGK01013174    KB738930    ENN82435.1    APGK01013159    APGK01013160    KB738929    ENN82439.1    KQ971338    KYB28165.1    KB632390    ERL94411.1    BT127729    AEE62691.1    KK854769    PTY18555.1    NEVH01021923    PNF19374.1    NEVH01006580    PNF37625.1    ACPB03010505    GBBI01003272    JAC15440.1    GDKW01002928    JAI53667.1    MF034805    AVT42171.1    GARF01000042    JAC88905.1    KK853032    KDR12258.1    KK853336    KDR08336.1    PYGN01000390    PSN47138.1    AY119083    AAM50943.1    AE014296    BT056236    AAF50035.2    ACL68683.1    AY075521    AAL68329.1    CM002912    KMY99032.1    CH480815    EDW41132.1    CH954178    EDV51440.1    CM000159    EDW94167.2    CH479240    EDW37581.1    GEDC01002932    JAS34366.1    KF828794    AIN44111.1    CH933809    EDW19319.1    CH902618    EDV39371.1    KPU78026.1    GEDC01011746    JAS25552.1    CH379069    EAL29640.1    OUUW01000004    SPP79199.1    OUUW01000002    SPP76781.1    CH963920    EDW77635.2    CH964062    EDW78857.2    SPP79198.1    CH479187    EDW39944.1    CH933807    EDW11002.1    KRG02475.1    KRG02476.1    GDHC01008458    GDHC01003474    JAQ10171.1    JAQ15155.1    CH940661    EDW71176.1    KRF85509.1    KRF85510.1    KRF85511.1    GEDC01025913    JAS11385.1    GEDC01001154    JAS36144.1    GECU01025895    JAS81811.1    ABLF02035238    CH940647    EDW70940.1    KRF85201.1    KRF85202.1    GDHF01028452    GDHF01018047    GDHF01002001    JAI23862.1    JAI34267.1    JAI50313.1    CP012525    ALC45046.1    LJIG01022819    KRT78556.1    GAMC01010411    JAB96144.1    GBHO01014271    GBRD01007904    JAG29333.1    JAG57917.1    GEDC01030302    GEDC01030086    GEDC01008426    GEDC01005369    GEDC01000164    JAS06996.1    JAS07212.1    JAS28872.1    JAS31929.1    JAS37134.1    PYGN01000259    PSN49875.1    GEDC01029100    GEDC01026518    GEDC01025608    GEDC01014560    GEDC01010316    GEDC01006295    GEDC01001363    JAS08198.1    JAS10780.1    JAS11690.1    JAS22738.1    JAS26982.1    JAS31003.1    JAS35935.1    GGMR01002706    MBY15325.1    CH916366    EDV97080.1    GGMS01017916    MBY87119.1    CH916368    EDW04294.1    MH172517    QAA95924.1    GGMS01010873    MBY80076.1    GAMC01017047    JAB89508.1    GECZ01011197    JAS58572.1    GBXI01015883    GBXI01015401    GBXI01002104    JAC98408.1    JAC98890.1    JAD12188.1    GAMC01010410    GAMC01010408    JAB96145.1    CH477809    EAT36018.1    KF828793    AIN44110.1    GAKP01001738    JAC57214.1    KY849640    ATY74521.1    GDHF01015383    GDHF01010110    GDHF01004300    JAI36931.1    JAI42204.1    JAI48014.1    GDQN01010299    JAT80755.1    DS231984    EDS30432.1    JRES01000502    KNC30573.1    GFDL01005899    JAV29146.1    ABLF02034227    ABLF02034231    ABLF02034236    GFDL01006011    JAV29034.1    GEBQ01011456    JAT28521.1    GFDL01006013    JAV29032.1    CP012523    ALC39759.1    GDHF01002644    JAI49670.1    GAKP01020912    GAKP01020911    JAC38040.1    KF828800    AIN44117.1    GBXI01010939    JAD03353.1    GGMR01013865    MBY26484.1    KY849643    ATY74524.1    GFXV01006246    MBW18051.1    JTDY01001309    KOB74240.1    GEDC01012756    JAS24542.1    ABLF02036668    ABLF02036673    GGMS01011330    MBY80533.1   

Proteomes

UP000053268    UP000218220    UP000007151    UP000019118    UP000007266    UP000030742    + More
UP000235965    UP000015103    UP000027135    UP000245037    UP000000803    UP000001292    UP000008711    UP000002282    UP000192221    UP000008744    UP000009192    UP000007801    UP000001819    UP000268350    UP000079169    UP000007798    UP000008792    UP000007819    UP000192223    UP000092553    UP000001070    UP000008820    UP000002320    UP000037069    UP000037510   

PRIDE

Q8MS57    Q9VTL3    Q8SXX6   

Pfam

PF00005   ABC_tran        + More
PF01061   ABC2_membrane

Interpro

IPR027417   P-loop_NTPase        + More
IPR003439   ABC_transporter-like       
IPR013525   ABC_2_trans       
IPR017871   ABC_transporter_CS       
IPR003593   AAA+_ATPase       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A1D9C109   S4NIB2   A0A194PHU9   A0A194PIL7   A0A2A4JSF5   A0A2H1WKT2   + More
A0A212EYH0   N6UL09   N6TPJ2   A0A139WK45   U4UVY2   J3JWW1   A0A2R7WJI2   A0A2J7PSR5   A0A2J7R9W6   T1I3H7   A0A023F2D5   A0A0P4VIF7   A0A2R4FXE8   A0A0U9HZ98   A0A067R385   A0A067QKC2   A0A2P8YSB2   Q8MS57   Q9VTL3   Q8SXX6   A0A0J9RTT3   B4HEW3   B3NGY3   B4PFL8   A0A1W4VU95   B4HAI3   A0A1B6E8X1   A0A158V6Y6   B4KUR3   B3M4A1   A0A1B6DIR7   Q2LZ69   A0A3B0JZT0   A0A3B0JVM2   A0A1S4EI61   B4N0M2   B4N3B8   A0A3B0K6S5   B4GQS2   B4KFN7   A0A146M787   B4MDB5   A0A1B6CDE3   A0A1B6EE46   A0A1B6I4E0   J9JXC1   B4LCP8   A0A1W4X256   A0A0K8V5S5   A0A0M4EG47   A0A0T6ATZ0   W8C2Y8   A0A0A9YE03   A0A1B6DT64   A0A2P8Z045   A0A1B6DAM8   A0A2S2NDX0   B4J2J5   A0A2S2RAU7   B4JD50   A0A3R5USX7   A0A2S2QQM8   W8AXI7   A0A1B6G7Z6   A0A0A1XNQ2   W8B4R5   Q16NT8   A0A158V4U5   A0A034WRH9   A0A2H4TES4   A0A0K8VTK0   A0A1E1W184   B0WLD9   A0A0L0CDT2   A0A1Q3FNT7   J9JSX9   A0A1Q3FNC5   A0A1B6LXW2   A0A1Q3FNE6   A0A0M3QTZ8   A0A0K8WFN7   A0A034V8F4   A0A158V1B5   A0A0A1WY89   A0A1W4UQ15   A0A2S2PAR8   A0A2H4TES0   A0A2H8TW86   A0A0L7LFT1   A0A1B6DFY5   J9K4G9   A0A2S2QS91  

PDB

6HCO     E-value=0.0294205,     Score=83

KEGG

101741923    no KO assigned | (RefSeq) ATP-binding cassette sub-family G member 1-like

GO

GO:0016021   GO:0016887   GO:0005524   GO:0042626   GO:0005886   GO:0055085   GO:0016020   GO:0003676   GO:0020037   GO:0004497   GO:0008270   GO:0005515   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

Length:

186

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

86.8385200000001

Exp number, first 60 AAs:

26.42062

Total prob of N-in:

0.92596

POSSIBLE N-term signal

sequence

inside

1  -  20

TMhelix

21  -  43

outside

44  -  57

TMhelix

58  -  80

inside

81  -  84

TMhelix

85  -  107

outside

108  -  121

TMhelix

122  -  144

inside

145  -  186

 

 

Pi

281.664122

Theta

186.261264

Tajima's D

1.287271

CLR

0.49859

CSRT

0.736113194340283

Interpretation

Uncertain