Gene

KWMTBOMO07082  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010527

Annotation

PREDICTED:_endoplasmic_reticulum_lectin_1_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr12(+):3237178-3244640      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.949

CDS

ATGAGAGTGAAAATTGTTATGTTAAGTTTAGTTTATAGCTGCATAGGTATTGAACATGACTTTAAAGGATTCGATGATAGCATTTTGTTTGGGATAAATTGGCCTGGTAATCCCAATTTAAACGAAAATTTTGTTGATGGAGAAAAAAACAAGTCTCAGAACCAAGAGTTAGTTAAAGTAACAACAACAAATAAAGAGAGTTACGAATGTCAACTGCCGGAACTTCGTAGTACGGAGTCTACCAGCATTGATGATTACGATGGTCCATCACCGCTTCACCTTCTAAAGCCTTTGATGAACAAAGAAATGTGTTCATACAGATTGGAAAGCTATTGGAGCTATGAAGTATGCCATGGAAGGTATATCCGGCAGTATCACGAAGAAAGAGAGGGCAAACAAATCAACACCCAAGAATATTTCTTGGGATATTGGAGCTCTGAAAAGCAGGCTAAGCTGGAGGCTGAAATGAAAGCGGCACAGGAATCCAAACAAATCCCCAAGACCACCAAAGTAGAGGGAGTTGCTCTACCTAACGTTGAAATAGTAATGGATGATGGTACAATTTGTGATTTAAATGGCAAACCACGACTAACTAGGGTTCATTATGTGTGTTACACACATGGAAAGCATGAGGTTTATTCCTTCAGAGAGACTTCTACTTGCGAGTACGAGATCATTATTCTGTCGCCGTTTCTATGTGAACATCCACAGTTCAAACCTATGGATGTTAGTGAGAATGTTATAAACTGCCTCCCAATCGGAGACGCTCCAAGGAAGCCAAGGGACTTATTGAAAATGGAAGCGAACAGTTTGAGATTTCATCATCAGAGCATAAGACTCATGGATAATGCTGACCAGACAGTTAAGGATATACTTGCAGTTTTGAAAGTCGGAAAATTTGAGAAGGACGGCGAAACCCATTTGAAATTCGAACTGCACCCGCTGGGTGACGACGAGGATATGACGTCAGACCCACCGAAGCCAGTACCGAGCGTCGACAAGCGCCCTCCGCCAATCACGGATGATTCTCCCGTACGAGCCTTCCTTAACGGGGAAAATTGTCTAAATGGTGGTACAGGCTGGTGGAAATACGAGTTCTGCTACGGGAAGCACGTGCTCCAGTACCACATAGATCGCGCCGGCGAGAAGACCACCGTAATGTTGGGTCGATTTGATGAGAAAGCGCATTTGGACTGGATCAAGGATAATAAAGGGAAAGCTCCGAAACCTATAGATCAAAGAATTTCAATATCGCATTTCTATTCGAACGGCGACGTTTGCGACAAAACCGGCCGACCCCGGCAGACCGAGGTCAAACTTAAATGTCTAGAGAATTCGTCGAGTCCAGCTCAAGTCTCCCTGTACTTGTTGGAACCTAAAACTTGTCATTACATACTGGGCGTGGAATCGCCTTTGATATGCGACATATTGCCTTTGGCCGACGAGAATGGCCTTATAAAAACTGTGAGAGAGGCCTTGGAAAAGAAGAAGGAGAGGAGTGAGGCTGTCGATGATGTCTCAGACAAGAATGTACCAAAATACGAGAATGATTAG

Protein

MRVKIVMLSLVYSCIGIEHDFKGFDDSILFGINWPGNPNLNENFVDGEKNKSQNQELVKVTTTNKESYECQLPELRSTESTSIDDYDGPSPLHLLKPLMNKEMCSYRLESYWSYEVCHGRYIRQYHEEREGKQINTQEYFLGYWSSEKQAKLEAEMKAAQESKQIPKTTKVEGVALPNVEIVMDDGTICDLNGKPRLTRVHYVCYTHGKHEVYSFRETSTCEYEIIILSPFLCEHPQFKPMDVSENVINCLPIGDAPRKPRDLLKMEANSLRFHHQSIRLMDNADQTVKDILAVLKVGKFEKDGETHLKFELHPLGDDEDMTSDPPKPVPSVDKRPPPITDDSPVRAFLNGENCLNGGTGWWKYEFCYGKHVLQYHIDRAGEKTTVMLGRFDEKAHLDWIKDNKGKAPKPIDQRISISHFYSNGDVCDKTGRPRQTEVKLKCLENSSSPAQVSLYLLEPKTCHYILGVESPLICDILPLADENGLIKTVREALEKKKERSEAVDDVSDKNVPKYEND

Uniprot

H9JLX5   A0A2A4IUE4   A0A1E1W6W4   A0A2H1UZM0   A0A194PIN6   A0A194QNI6   + More
A0A212FA96   S4P2C8   A0A2J7Q8A5   A0A2J7Q8B1   A0A158NR90   A0A067RK67   A0A195BE96   A0A151X522   F4WB20   A0A1B6G9A4   A0A1Y1LS51   A0A1B6LLQ5   A0A195FJL0   A0A310SX19   A0A0M9A1L8   E2BLR9   A0A026W5R4   D6WC47   A0A1W4X4H6   A0A0L7RE36   A0A0J7L920   A0A151IFT5   A0A1B6HPD9   A0A151IU40   E2A0E9   A0A232FD42   E0VNV4   E9IRY1   A0A1J1HJB0   A0A1L8DW66   A0A1L8DW80   A0A2A3EF46   A0A2P8Y8I4   A0A336LLP1   T1DGN7   A0A336LQN8   A0A182NE86   A0A182Q643   J3JXL5   N6UNI9   A0A182IZ96   A0A084VP97   A0A182PB49   A0A154PB30   A0A023EW34   A0A1Q3FH37   A0A182VV26   A0A182K168   U5EP20   Q7QG77   Q170H4   A0A1S4FI03   A0A182VAR6   A0A182GN56   A0A182L5S3   A0A182UBJ5   A0A182XCN3   Q170H5   A0A182RPP9   A0A182IE07   A0A224XEI7   A0A1Q3FH53   A0A182Y5R2   B0X6J9   A0A182LWM3   T1DJG7   A0A0P4VUT3   A0A087ZYR0   A0A2M4BLY1   W5J6P8   A0A2M4BL55   A0A2M4BL41   A0A2M3Z3D9   A0A2M3Z398   A0A2M3Z3B5   A0A2K8JM33   A0A2M4A6S9   T1I6M7   A0A0P5WAY6   A0A0P6JAY5   A0A0P5XI52   A0A182F4E8   J9K540   E9HAB7   A0A146LN24   A0A0A9X029   A0A1D2NAS4   A0A2S2PSH0   A0A0P6EQK3   A0A0P6F725   A0A0P6BFQ2   A0A0N8C1M2   A0A3S3P692   X1WUR7  

Pubmed

19121390    26354079    22118469    23622113    21347285    24845553    + More
21719571    28004739    20798317    24508170    30249741    18362917    19820115    28648823    20566863    21282665    29403074    24330624    22516182    23537049    24438588    24945155    12364791    17510324    26483478    20966253    25244985    27129103    20920257    23761445    21292972    26823975    25401762    27289101   

EMBL

BABH01005335    BABH01005336    NWSH01007909    PCG62760.1    GDQN01008360    JAT82694.1    + More
ODYU01000002    SOQ34047.1    KQ459603    KPI92913.1    KQ461194    KPJ06919.1    AGBW02009509    OWR50648.1    GAIX01012085    JAA80475.1    NEVH01016966    PNF24821.1    PNF24823.1    ADTU01023825    KK852424    KDR24187.1    KQ976504    KYM82893.1    KQ982540    KYQ55424.1    GL888056    EGI68640.1    GECZ01022859    GECZ01010759    JAS46910.1    JAS59010.1    GEZM01050228    JAV75668.1    GEBQ01015380    JAT24597.1    KQ981522    KYN40588.1    KQ759870    OAD62414.1    KQ435765    KOX75337.1    GL449036    EFN83403.1    KK107390    QOIP01000007    EZA51410.1    RLU20262.1    KQ971316    EEZ97851.1    KQ414613    KOC69075.1    LBMM01000197    KMR04520.1    KQ977771    KYN00008.1    GECU01031154    JAS76552.1    KQ980970    KYN10927.1    GL435586    EFN73086.1    NNAY01000440    OXU28378.1    DS235354    EEB15060.1    GL765283    EFZ16592.1    CVRI01000001    CRK86361.1    GFDF01003408    JAV10676.1    GFDF01003377    JAV10707.1    KZ288269    PBC29902.1    PYGN01000806    PSN40562.1    UFQT01000048    SSX18972.1    GALA01000127    JAA94725.1    SSX18973.1    AXCN02000866    BT127984    KB632093    AEE62946.1    ERL88683.1    APGK01004410    APGK01027778    KB740671    KB735736    ENN79624.1    ENN83315.1    ATLV01014987    KE524999    KFB39791.1    KQ434864    KZC09119.1    GAPW01001039    JAC12559.1    GFDL01008178    JAV26867.1    GANO01000353    JAB59518.1    AAAB01008839    EAA05924.4    CH477473    EAT40367.1    JXUM01014438    JXUM01014439    KQ560403    KXJ82588.1    EAT40368.1    APCN01004546    GFTR01007012    JAW09414.1    GFDL01008180    JAV26865.1    DS232416    EDS41482.1    AXCM01002140    GALA01000276    JAA94576.1    GDKW01000802    JAI55793.1    GGFJ01004647    MBW53788.1    ADMH02002133    ETN58444.1    GGFJ01004644    MBW53785.1    GGFJ01004646    MBW53787.1    GGFM01002290    MBW23041.1    GGFM01002239    MBW22990.1    GGFM01002244    MBW22995.1    KY031135    ATU82886.1    GGFK01003158    MBW36479.1    ACPB03010942    GDIP01088653    LRGB01003024    JAM15062.1    KZS05002.1    GDIQ01020226    JAN74511.1    GDIP01071747    JAM31968.1    ABLF02030293    GL732611    EFX71320.1    GDHC01010869    JAQ07760.1    GBHO01030240    GBRD01012846    JAG13364.1    JAG52980.1    LJIJ01000115    ODN02347.1    GGMR01019803    MBY32422.1    GDIQ01059768    JAN34969.1    GDIQ01052370    JAN42367.1    GDIP01015333    JAM88382.1    GDIQ01123683    JAL28043.1    NCKU01000359    RWS15814.1    ABLF02009754   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000235965    + More
UP000005205    UP000027135    UP000078540    UP000075809    UP000007755    UP000078541    UP000053105    UP000008237    UP000053097    UP000279307    UP000007266    UP000192223    UP000053825    UP000036403    UP000078542    UP000078492    UP000000311    UP000215335    UP000009046    UP000183832    UP000242457    UP000245037    UP000075884    UP000075886    UP000030742    UP000019118    UP000075880    UP000030765    UP000075885    UP000076502    UP000075920    UP000075881    UP000007062    UP000008820    UP000075903    UP000069940    UP000249989    UP000075882    UP000075902    UP000076407    UP000075900    UP000075840    UP000076408    UP000002320    UP000075883    UP000005203    UP000000673    UP000015103    UP000076858    UP000069272    UP000007819    UP000000305    UP000094527    UP000285301   

PRIDE

H9JLX5   

Pfam

PF07915   PRKCSH

Interpro

IPR009011   Man6P_isomerase_rcpt-bd_dom_sf        + More
IPR012913   OS9-like       

Gene 3D

2.70.130.10    

ProteinModelPortal

H9JLX5   A0A2A4IUE4   A0A1E1W6W4   A0A2H1UZM0   A0A194PIN6   A0A194QNI6   + More
A0A212FA96   S4P2C8   A0A2J7Q8A5   A0A2J7Q8B1   A0A158NR90   A0A067RK67   A0A195BE96   A0A151X522   F4WB20   A0A1B6G9A4   A0A1Y1LS51   A0A1B6LLQ5   A0A195FJL0   A0A310SX19   A0A0M9A1L8   E2BLR9   A0A026W5R4   D6WC47   A0A1W4X4H6   A0A0L7RE36   A0A0J7L920   A0A151IFT5   A0A1B6HPD9   A0A151IU40   E2A0E9   A0A232FD42   E0VNV4   E9IRY1   A0A1J1HJB0   A0A1L8DW66   A0A1L8DW80   A0A2A3EF46   A0A2P8Y8I4   A0A336LLP1   T1DGN7   A0A336LQN8   A0A182NE86   A0A182Q643   J3JXL5   N6UNI9   A0A182IZ96   A0A084VP97   A0A182PB49   A0A154PB30   A0A023EW34   A0A1Q3FH37   A0A182VV26   A0A182K168   U5EP20   Q7QG77   Q170H4   A0A1S4FI03   A0A182VAR6   A0A182GN56   A0A182L5S3   A0A182UBJ5   A0A182XCN3   Q170H5   A0A182RPP9   A0A182IE07   A0A224XEI7   A0A1Q3FH53   A0A182Y5R2   B0X6J9   A0A182LWM3   T1DJG7   A0A0P4VUT3   A0A087ZYR0   A0A2M4BLY1   W5J6P8   A0A2M4BL55   A0A2M4BL41   A0A2M3Z3D9   A0A2M3Z398   A0A2M3Z3B5   A0A2K8JM33   A0A2M4A6S9   T1I6M7   A0A0P5WAY6   A0A0P6JAY5   A0A0P5XI52   A0A182F4E8   J9K540   E9HAB7   A0A146LN24   A0A0A9X029   A0A1D2NAS4   A0A2S2PSH0   A0A0P6EQK3   A0A0P6F725   A0A0P6BFQ2   A0A0N8C1M2   A0A3S3P692   X1WUR7  

PDB

3AIH     E-value=4.60018e-16,     Score=208

KEGG

101736625    K14008 endoplasmic reticulum lectin 1 | (RefSeq) endoplasmic reticulum lectin 1

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0030246   GO:0016021   GO:0030970   GO:0005788   GO:0030433  

SignalP

Position:   1 - 16,         Likelihood:  0.942139

 

 

Length:

517

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01275

Exp number, first 60 AAs:

0.01233

Total prob of N-in:

0.00203

outside

1  -  517

 

 

Pi

18.28602

Theta

41.10047

Tajima's D

-1.791155

CLR

210.637838

CSRT

0.0285985700714964

Interpretation

Uncertain