Gene

KWMTBOMO07076  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010435

Annotation

PREDICTED:_transmembrane_protein_87A_[Plutella_xylostella]

Location

Bomo_Chr12(-):3163434-3178007      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.764

CDS

ATGTTTCTTAAGCTTCTTATTTTTATTGTAATTGTAAAATGTACGCACAGTTTTTCCGATGTCGGAAAGTGGGATTTGGAACTTAGTGGCGATGATTGTCATTTCACATTAGCAAAGTCATTATTTAAGAATACAAAGCTTATAATTGCAATGCACTGTGATGCAGCTGTACCATTGAACATCACATACGATTGGACACCTGAAATGTGTTCTCCGGAATACTTACATTATTTTGAACAGAGGATAGTTACGTGCACCGATCGCTTGGAACGCACAACGAGAGACGTCAACGCCAGTAGGTCTTACCAAGCGATGAGCGTTCAAGAGACAAGAACGTGTCACAGTAATTCTTCGCTTGTGTTCGACGGCGGGAAGGATCAGCCCGTTGATAAAATTGAAACGGCCATAACATCGCAATCTAAACTACCGCCTCTATTGATCGTCGAAAAAGAGGGTGTGTACGTGCTACAGATGCGCGTGAGGAGTAACCAGAAGTTCAAAGCATTCGTACGAATCGAGATGGTGGCGCCATCTGGATATCTGGCCGCGGCAATATGGCCCCTGCTTCCGTTCTTCGGCACGATGTGCGGCGTGTACACTGTGCTGTGCGCGTGCTGGCTGGCCGTGTGCGGGCTGCAGTGGCGCGACCTGCTGCGCATACAGTACTGGATCGGGGGCGTCGCGCTGCTGGGCATGGTCGAGACGGCCACTTACTACGGGGTCTACTCATCTATCAATAGATCTGGTTATTTTAACGCCGAGGCGTACATGTTTGCGGAGTGGGTGTCTGTCGCGAAACGAGCCCTGGCGCGGATGCTGGTCATCATAGTGTCTCTGGGTTTCGGCATCGTCAAGCCGCGGCTGGGGCCGGCGCTGCAGCGCGTGGCGGGCACGGGCGCGCTGTGGGCGGTGCTGGGCGGCATCAACGCGTGGCTGCGGCTGCACCACAAGGCGGACCGCTCCAACCGCGACCTGCTGCTGTCCGAGGTGCCGCTCTCGCTGCTCGACAGCGCCATCTGCTGGTGGGTGTTCGTGTCGCTCGCGCACACCATGCGCACGCTGCAGCTCAGGAGGAACGCCATAAAACTGTCTCTGTACAAACATTTCACGAACACGCTGATATTCGCCGTCATATCGTCCGTCGTGTTCATGCTGTATTCCATTAAATCGTTCAGATTCCTCAACTGCATCACAGAATGGAAGGAGGTGTGGATGGACGAAGCCTATTGGCACATTTTATTTGCTTGTGTACTTACTGTGATCATGATACTCTGGCGGCCGACAAACAATAACCAAAGATACGCTTTCACTCCGCTTTTGGACAACGCGGAAGACGACGATGAGGAAGAGGAGCAATTCGTGAATGATGCATACGGAGTCAAGATGCGTGGATCGAGCATCAACACGGACCCAGAGGGCCGGGACTCTCAGCCCGAACCCAACACTAATTCTCTTGAATCAGACCTGCGTTGGGTCGAGGAGAACATACCGGCCAGTACTCTTCCGCTTTTGGACTCGGACGAAGAGATCATTAACACGAAATTCGAAGTTTCCAAAATGCAGTAG

Protein

MFLKLLIFIVIVKCTHSFSDVGKWDLELSGDDCHFTLAKSLFKNTKLIIAMHCDAAVPLNITYDWTPEMCSPEYLHYFEQRIVTCTDRLERTTRDVNASRSYQAMSVQETRTCHSNSSLVFDGGKDQPVDKIETAITSQSKLPPLLIVEKEGVYVLQMRVRSNQKFKAFVRIEMVAPSGYLAAAIWPLLPFFGTMCGVYTVLCACWLAVCGLQWRDLLRIQYWIGGVALLGMVETATYYGVYSSINRSGYFNAEAYMFAEWVSVAKRALARMLVIIVSLGFGIVKPRLGPALQRVAGTGALWAVLGGINAWLRLHHKADRSNRDLLLSEVPLSLLDSAICWWVFVSLAHTMRTLQLRRNAIKLSLYKHFTNTLIFAVISSVVFMLYSIKSFRFLNCITEWKEVWMDEAYWHILFACVLTVIMILWRPTNNNQRYAFTPLLDNAEDDDEEEEQFVNDAYGVKMRGSSINTDPEGRDSQPEPNTNSLESDLRWVEENIPASTLPLLDSDEEIINTKFEVSKMQ

Uniprot

H9JLN4   A0A1E1WMN4   A0A2A4K3C8   S4NNM0   A0A2H1VD60   A0A194PJL9   + More
U5EXR0   A0A1L8DK40   B0X9B6   A0A1Q3FEB3   A0A182QQS8   A0A182RBL2   A0A182VI33   A0A1S4GXE8   A0A182HV71   A0A182GT18   A0A1L8DJH7   A0A182J562   Q17HG4   A0A182NE31   A0A182WT76   A0A2M4AB55   A0A2M4AB27   A0A2J7RCT5   A0A1Y1KZD2   A0A2M4BJH4   A0A1B6GQR7   A0A182F4K8   A0A2M3Z3R3   A0A1B6F382   A0A182PJ77   W5JIK3   A0A182MRF5   A0A1L8DJI4   Q7PN25   A0A2M3Z522   D2A321   A0A182L218   A0A1B0DBD0   A0A1B6H2M8   A0A0P4VNA2   A0A182KAB2   A0A146LRW3   A0A0A9XEF5   Q29MS8   A0A0K8SA88   A0A1W4X995   A0A1A9W1R5   B4KI34   A0A3B0JPK2   A0A182YS85   A0A0T6AY98   A0A0Q9XGM2   B4G8S7   A0A1A9ZIU2   A0A1B6CTU1   A0A1A9VXL6   A0A336LKK6   B3MUA3   A0A1A9XDS1   A0A1B0FDI9   B4JAA6   A0A1I8M0M1   B4MW65   B4LTC1   A0A0L0C711   B4Q773   B4IDB0   B4P3K5   A0A1I8Q322   Q9VQ34   B3N8W7   A0A0M4E353   A0A2M4CH35   A0A2M4CH95   A0A1W7R9E5   E0VNX5   A0A0Q9W957   W8B2K6   B0WCE2   A0A034W079   A0A0K8WJT2   W8B9M1   A0A023ESG6   A0A224XG03   A0A0A1XST4   A0A1Z5L2V4   A0A0P6DZD0   A0A0P4Y598   A0A0P5TJ38   E9FX77   A0A1Z5KWQ8   T1JVA1   A0A0P6DBP0   A0A023G017  

Pubmed

19121390    23622113    26354079    12364791    26483478    17510324    + More
28004739    20920257    23761445    18362917    19820115    20966253    27129103    26823975    25401762    15632085    17994087    25244985    25315136    26108605    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20566863    24495485    25348373    24945155    25830018    28528879    21292972   

EMBL

BABH01005321    BABH01005322    BABH01005323    GDQN01003898    GDQN01002790    JAT87156.1    + More
JAT88264.1    NWSH01000232    PCG78162.1    GAIX01013876    JAA78684.1    ODYU01001909    SOQ38778.1    KQ459603    KPI92919.1    GANO01000822    JAB59049.1    GFDF01007245    JAV06839.1    DS232530    EDS43048.1    GFDL01009151    JAV25894.1    AXCN02000872    AAAB01008964    APCN01002495    JXUM01017468    KQ560484    KXJ82185.1    GFDF01007455    JAV06629.1    CH477249    EAT46098.2    GGFK01004669    MBW37990.1    GGFK01004670    MBW37991.1    NEVH01005883    PNF38638.1    GEZM01068804    JAV66763.1    GGFJ01003992    MBW53133.1    GECZ01027727    GECZ01005539    GECZ01005020    GECZ01003561    JAS42042.1    JAS64230.1    JAS64749.1    JAS66208.1    GGFM01002406    MBW23157.1    GECZ01031651    GECZ01025121    GECZ01024008    GECZ01022751    JAS38118.1    JAS44648.1    JAS45761.1    JAS47018.1    ADMH02001293    ETN63123.1    AXCM01015477    GFDF01007472    JAV06612.1    EAA12882.4    GGFM01002844    MBW23595.1    KQ971338    EFA02256.1    AJVK01004749    GECZ01000830    JAS68939.1    GDKW01003362    JAI53233.1    GDHC01012695    GDHC01008058    JAQ05934.1    JAQ10571.1    GBHO01026441    GBHO01012083    JAG17163.1    JAG31521.1    CH379060    EAL33615.1    GBRD01016161    JAG49665.1    CH933807    EDW11316.2    OUUW01000006    SPP82302.1    LJIG01022511    KRT80192.1    KRG02643.1    CH479180    EDW28757.1    GEDC01020339    GEDC01002988    JAS16959.1    JAS34310.1    UFQS01000003    UFQT01000003    SSW96756.1    SSX17143.1    CH902624    EDV33432.1    CCAG010010432    CH916368    EDW03777.1    CH963857    EDW75935.1    CH940649    EDW63891.2    JRES01000827    KNC28026.1    CM000361    CM002910    EDX03364.1    KMY87505.1    CH480829    EDW45536.1    CM000157    EDW87272.1    AE014134    AY051520    AAF51348.3    AAK92944.1    CH954177    EDV57367.1    CP012523    ALC37971.1    GGFL01000494    MBW64672.1    GGFL01000495    MBW64673.1    GFAH01000625    JAV47764.1    DS235354    EEB15081.1    KRF81336.1    GAMC01011190    GAMC01011186    JAB95365.1    DS231887    EDS43466.1    GAKP01009961    GAKP01009960    JAC48991.1    GDHF01016220    GDHF01001010    JAI36094.1    JAI51304.1    GAMC01011183    JAB95372.1    GAPW01001388    JAC12210.1    GFTR01006462    JAW09964.1    GBXI01014913    GBXI01000201    JAC99378.1    JAD14091.1    GFJQ02005243    JAW01727.1    GDIQ01070014    LRGB01001361    JAN24723.1    KZS12206.1    GDIP01233438    JAI89963.1    GDIP01127093    JAL76621.1    GL732526    EFX88032.1    GFJQ02007407    JAV99562.1    CAEY01000792    GDIQ01080448    JAN14289.1    GBBL01001015    JAC26305.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000002320    UP000075886    UP000075900    + More
UP000075903    UP000075840    UP000069940    UP000249989    UP000075880    UP000008820    UP000075884    UP000076407    UP000235965    UP000069272    UP000075885    UP000000673    UP000075883    UP000007062    UP000007266    UP000075882    UP000092462    UP000075881    UP000001819    UP000192223    UP000091820    UP000009192    UP000268350    UP000076408    UP000008744    UP000092445    UP000078200    UP000007801    UP000092443    UP000092444    UP000001070    UP000095301    UP000007798    UP000008792    UP000037069    UP000000304    UP000001292    UP000002282    UP000095300    UP000000803    UP000008711    UP000092553    UP000009046    UP000076858    UP000000305    UP000015104   

PRIDE

H9JLN4    Q9VQ34   

Pfam

PF06814   Lung_7-TM_R        + More
PF02437   Ski_Sno

Interpro

IPR009637   GPR107-like        + More
IPR009061   DNA-bd_dom_put_sf       
IPR037000   Ski_DNA-bd_sf       
IPR003380   SKI/SNO/DAC       

SUPFAM

SSF46955   SSF46955       

Gene 3D

3.10.260.20    

ProteinModelPortal

H9JLN4   A0A1E1WMN4   A0A2A4K3C8   S4NNM0   A0A2H1VD60   A0A194PJL9   + More
U5EXR0   A0A1L8DK40   B0X9B6   A0A1Q3FEB3   A0A182QQS8   A0A182RBL2   A0A182VI33   A0A1S4GXE8   A0A182HV71   A0A182GT18   A0A1L8DJH7   A0A182J562   Q17HG4   A0A182NE31   A0A182WT76   A0A2M4AB55   A0A2M4AB27   A0A2J7RCT5   A0A1Y1KZD2   A0A2M4BJH4   A0A1B6GQR7   A0A182F4K8   A0A2M3Z3R3   A0A1B6F382   A0A182PJ77   W5JIK3   A0A182MRF5   A0A1L8DJI4   Q7PN25   A0A2M3Z522   D2A321   A0A182L218   A0A1B0DBD0   A0A1B6H2M8   A0A0P4VNA2   A0A182KAB2   A0A146LRW3   A0A0A9XEF5   Q29MS8   A0A0K8SA88   A0A1W4X995   A0A1A9W1R5   B4KI34   A0A3B0JPK2   A0A182YS85   A0A0T6AY98   A0A0Q9XGM2   B4G8S7   A0A1A9ZIU2   A0A1B6CTU1   A0A1A9VXL6   A0A336LKK6   B3MUA3   A0A1A9XDS1   A0A1B0FDI9   B4JAA6   A0A1I8M0M1   B4MW65   B4LTC1   A0A0L0C711   B4Q773   B4IDB0   B4P3K5   A0A1I8Q322   Q9VQ34   B3N8W7   A0A0M4E353   A0A2M4CH35   A0A2M4CH95   A0A1W7R9E5   E0VNX5   A0A0Q9W957   W8B2K6   B0WCE2   A0A034W079   A0A0K8WJT2   W8B9M1   A0A023ESG6   A0A224XG03   A0A0A1XST4   A0A1Z5L2V4   A0A0P6DZD0   A0A0P4Y598   A0A0P5TJ38   E9FX77   A0A1Z5KWQ8   T1JVA1   A0A0P6DBP0   A0A023G017  

KEGG

101736014    no KO assigned | (RefSeq) transmembrane protein 87A

GO

GO:0016021   GO:0015631   GO:0000287   GO:0005634   GO:0008270   GO:0005515   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

PANTHER

PTHR21229  

SignalP

Position:   1 - 17,         Likelihood:  0.989441

 

 

Length:

521

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

147.33283

Exp number, first 60 AAs:

0.02337

Total prob of N-in:

0.14644

outside

1  -  187

TMhelix

188  -  210

inside

211  -  222

TMhelix

223  -  245

outside

246  -  266

TMhelix

267  -  284

inside

285  -  290

TMhelix

291  -  313

outside

314  -  325

TMhelix

326  -  348

inside

349  -  368

TMhelix

369  -  388

outside

389  -  407

TMhelix

408  -  425

inside

426  -  521

 

 

Pi

200.108889

Theta

155.425125

Tajima's D

-1.368079

CLR

1.077956

CSRT

0.0777961101944903

Interpretation

Uncertain