Silkworm Genome Informatics Database

Gene

KWMTBOMO07069

Annotation

PREDICTED:_uncharacterized_protein_LOC106721395_[Papilio_machaon]

Location

Bomo_Chr12(-):3107104-3110057 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.78

CDS

ATGGTATATAAATACAAGAGGAAGACTAATCAAGCCCAATGGAGTGAGGACAGTATGATGCTTGCAATAGCAGACTGCAATTCTGGCATTCCTGTCAAAACGACCGCAAAAAAGTATGGTCTACCTTACGCCACTCTCTATAGGCATTGGAAAAAAGGTAGTTCGACGGCTCAGCTTGGTCGTTTTCGTAAAGTTTTCAACGATGGTCAAGAGGGAGATCTTCGAACGTATTTGTATGAAATGGATAGTGTTTTTTATGGGCTAACCCGAGAAGATTTTAAAACATTAGTTTTTGAATACGCGAAACGCAATAATGTCACTTATCCGCCTAGTTGGGACAAAAATAAAAAAGCTGGTGATGATTGGCTAGCAGGATTTATTAGAAGAAATCCACAAATTACACTAAGAATTCCAGAAGCAACCACAATTGGCAGAGTTAAAGGCTTCAATCGTCCTCAAGTAGAAAGGTTCTATAAACTGTTAAGTGAACAAATTGAGAAGTGTCAAATTGATGGTACTAGAATCTATAATATAGATGAAACTGGCATTCAGACCTCGACAAATAAACCACCCAAGGTTCTTTCAGTTAAAGGTAAGAGGCAAGTTGGAGTCATTTCCAGCACTGAACGTGGACAAACTACGACAGTCGTGTGTTGCTGCAACGCTTCTGGATCATTCGTTCCACCGTTTATGATATTTGCACGTAAAAGGATGCAAGATCGCCTTTTGGATGGTTCTCCTCCAGAGACTCGAGGAAGTTGTTCAGCTTCGGGATGGATAAATGGAGAAATATTTTTGGATTGGCTTAAATTTTTCGTCGGCCACGTACGTCCGACAAAAGACAAAAAAGTTATTTTACTTCTGGACAACCATGAAAGCCATAAATACTACCCAGCTTTACAGTACGCAACTGAAAATAATGTCATCATTTTGTCTTTGCCACCGCACACCTCAAACAAACTTCAACCTCTGGACGTGGCTGTATATGGTCCATTTAAAATATTCTTCGAGCAAGAAATCAATAGATTTCAAAAGGCTCATCCAGGTAGGATAATCAACCAATACGATGTAGCCAAACTGTTCAGTCCAGCTTATCTGAAATCTGCTACTCCTAACAATGCTATCAAAGGCTTTCAATCAACCGGTATCTGGCCAACAAATAAAGATATATGGGGAGAAGAAGATTATGCACCATCTTCTATTACAATGACAGACCGTAATACCGCTAACCAACAGGAGACTTTTATAGACTCAAACAGTCAAAATGTTGAAATTACGATTGACATCGAAAAGCCTTCTACATCAGGGCTCCAAAGTCAGTCACTGCAAATTGATGTAGAACCACTGGAACAGATTGGAAGAAAATTTATTGACAATGTGAATGTAGAAGTTGAAGCTGCAGTGGAAAATAGTATCATGGGTATAGTATCAGTGTCCAATATGAATCAAATACATTCTCGAGATACATCGCCTTCAATTTTGGATAAATTACCCGACAAAGATCCCCTTACATGCAATGCTGTTGTAGTAACGGCTGTAGCTGATAATACTCAAAAATTGTCTAAACCACAAGAAGCAATGTCCACTGAAGATATGAATCAAGGTGCAGATCTGACTCAAGACAGTATAGATATAAAAGAGGGTCAATTTAAAGGCAACGATGATGAAATTATTATGGACCTGGAATCATCTACGGCTCGGGCTTCAGCATATTTCAGTCCTAAAGACATAAGACCGCTTCCGATGCCACGCGTTTCTGTGGGTACACGTAAAAGAAAGGTTCAAAAGTCTGAGGTGTTAACAAGCACGCCGGTGAAGCGAGAACAAAAAGAAAAATTTATAAAAATTAATGTCAAAGCAATGAAAAATATGAATATAGATTTAAATGCTAAACCAAAGACTGCGACAAAGAAAAATACTAAAACGACCAAAAATATAATTGTTAAAGATAAAAGCAGTGATAAGGAAAACGAGGAAGAACAGTGTGTATGCTATTATTGCGGGGAGAACTATATAGAAATAAATAAAAAACCAGTTGAGGATTGGATTCAGTGTGATAAATGTAAGCAATGGAGTCACGAAAAATGCACGGCTTATGGAGGAATAGGCTTATTCTTTTGTGATATCTGCACGGATTAG

Protein

MVYKYKRKTNQAQWSEDSMMLAIADCNSGIPVKTTAKKYGLPYATLYRHWKKGSSTAQLGRFRKVFNDGQEGDLRTYLYEMDSVFYGLTREDFKTLVFEYAKRNNVTYPPSWDKNKKAGDDWLAGFIRRNPQITLRIPEATTIGRVKGFNRPQVERFYKLLSEQIEKCQIDGTRIYNIDETGIQTSTNKPPKVLSVKGKRQVGVISSTERGQTTTVVCCCNASGSFVPPFMIFARKRMQDRLLDGSPPETRGSCSASGWINGEIFLDWLKFFVGHVRPTKDKKVILLLDNHESHKYYPALQYATENNVIILSLPPHTSNKLQPLDVAVYGPFKIFFEQEINRFQKAHPGRIINQYDVAKLFSPAYLKSATPNNAIKGFQSTGIWPTNKDIWGEEDYAPSSITMTDRNTANQQETFIDSNSQNVEITIDIEKPSTSGLQSQSLQIDVEPLEQIGRKFIDNVNVEVEAAVENSIMGIVSVSNMNQIHSRDTSPSILDKLPDKDPLTCNAVVVTAVADNTQKLSKPQEAMSTEDMNQGADLTQDSIDIKEGQFKGNDDEIIMDLESSTARASAYFSPKDIRPLPMPRVSVGTRKRKVQKSEVLTSTPVKREQKEKFIKINVKAMKNMNIDLNAKPKTATKKNTKTTKNIIVKDKSSDKENEEEQCVCYYCGENYIEINKKPVEDWIQCDKCKQWSHEKCTAYGGIGLFFCDICTD

Uniprot

A0A2A4J0W1 A0A1Y1NJC0 A0A1Y1NGN4 H9JME9 H9JAE4 A0A2A4J1E0 + More
A0A2A4K4E0 A0A2H1VTA0

Pubmed

28004739 19121390

EMBL

NWSH01004485 PCG65052.1 GEZM01002998 JAV97000.1 GEZM01002997 JAV97001.1 + More
BABH01016912 BABH01009206 NWSH01003711 PCG65895.1 NWSH01000193 PCG78522.1 ODYU01004314 SOQ44057.1

Proteomes

UP000218220 UP000005204

PRIDE

H9JME9 H9JAE4

Pfam

PF03184   DDE_1        + More
PF05225   HTH_psq
PF03221   HTH_Tnp_Tc5

Interpro

IPR013083   Znf_RING/FYVE/PHD        + More
IPR036880   Kunitz_BPTI_sf
IPR009057   Homeobox-like_sf
IPR011011   Znf_FYVE_PHD
IPR004875   DDE_SF_endonuclease_dom
IPR006600   HTH_CenpB_DNA-bd_dom
IPR007889   HTH_Psq
IPR019786   Zinc_finger_PHD-type_CS

SUPFAM

SSF46689   SSF46689        + More
SSF57362   SSF57362
SSF57903   SSF57903

Gene 3D

3.30.40.10

ProteinModelPortal

A0A2A4J0W1 A0A1Y1NJC0 A0A1Y1NGN4 H9JME9 H9JAE4 A0A2A4J1E0 + More
A0A2A4K4E0 A0A2H1VTA0

KEGG

NA

GO

GO:0003677 GO:0046872 GO:0004867 GO:0003676

Length:

712

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.47627

Exp number, first 60 AAs:

0.00226

Total prob of N-in:

0.07841

outside

1 - 712

Pi

62.554685

Theta

68.861861

Tajima's D

-0.322489

CLR

10.730846

CSRT

0.285085745712714

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree