Silkworm Genome Informatics Database

Gene

KWMTBOMO07066

Pre Gene Modal

BGIBMGA010442

Annotation

hypothetical_protein_RR48_11400_[Papilio_machaon]

Location

Bomo_Chr12(-):3019526-3023714 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 3.008

CDS

ATGCCACCAAACGCCAAAGACAGTCTGTTCGAAGTGGTTCCCCACGATACAAAAGATGACGCCTCAGAATATGAAGACCTCAGTGAGGATACAGAGGTCACGGAGTGTTCCTGCGACAAGGCTAGCTACGGAGACATTGTGTTTAGCACTTTCGTGGTTGCGCCCTTAGTGGTGTCTGTGTGGCGTGGCACGTGGCAAATAATGGACATCTACGAAAACTACTTCCCGTTCGCTGAATCATACTTCATGGGAATTATCGTTCATATATCCTTCGCGTTCTTAAGAGCTACGTTTCTGGCCCGATCTGCCGGCGCTTGGAGTGGCGAGAACGGTGGCGTACTCCGGTGGATACGAGAAAGGCTTTTGTCCAAATTATATACTTACATCTTCGTGCTGTCCAATCTCACAATGTGGCGTGGCGGTTGGGGCGTACTGGATATGTTCTTGAGCACTGTTATACCTGATCCTGATGATCCTCATAGCTGGCTTATGGCGGGCCAAAGAGTGCTCGTGGATAGATCGGTCAGGTTACGGACTTTCAAAAATATGTTCATGGATCAGTGGACCATTCTTTAA

Protein

MPPNAKDSLFEVVPHDTKDDASEYEDLSEDTEVTECSCDKASYGDIVFSTFVVAPLVVSVWRGTWQIMDIYENYFPFAESYFMGIIVHISFAFLRATFLARSAGAWSGENGGVLRWIRERLLSKLYTYIFVLSNLTMWRGGWGVLDMFLSTVIPDPDDPHSWLMAGQRVLVDRSVRLRTFKNMFMDQWTIL

Uniprot

A0A2H1VMB2 A0A2A4JEC6 A0A194QTN0 A0A212FAA4 Q17L32 A0A1S4G7B9 + More
A0A182UTK6 A0A182Y3E0 A7UUK9 A0A182IXR9 A0A182W6M6 A0A182L0U5 A0A1S4GXW2 A0A182F4Z8 A0A182U062 U4UP67 A0A182PAV5 A0A182XL86 A0A182MDT3 A0A139WCA6 A0A182RMC4 A0A182QD71 A0A3L8DT95 E2AI67 F4X589 A0A195B857 A0A1Y1N4F1

Pubmed

26354079 22118469 17510324 25244985 12364791 20966253 + More
23537049 18362917 19820115 30249741 20798317 21719571 28004739

EMBL

ODYU01003339 SOQ41969.1 NWSH01001809 PCG70058.1 KQ461194 KPJ06901.1 + More
AGBW02009505 OWR50658.1 CH477219 EAT47394.1 AAAB01008964 EDO63567.1 KB632308 ERL91946.1 AXCM01002004 KQ971371 KYB25485.1 AXCN02000803 QOIP01000005 RLU23119.1 GL439655 EFN66866.1 GL888695 EGI58387.1 KQ976565 KYM80432.1 GEZM01013085 JAV92763.1

Proteomes

UP000218220 UP000053240 UP000007151 UP000008820 UP000075903 UP000076408 + More
UP000007062 UP000075880 UP000075920 UP000075882 UP000069272 UP000075902 UP000030742 UP000075885 UP000076407 UP000075883 UP000007266 UP000075900 UP000075886 UP000279307 UP000000311 UP000007755 UP000078540

Pfam

PF15993 Fuseless

Interpro

IPR032751 Fuseless

ProteinModelPortal

A0A2H1VMB2 A0A2A4JEC6 A0A194QTN0 A0A212FAA4 Q17L32 A0A1S4G7B9 + More
A0A182UTK6 A0A182Y3E0 A7UUK9 A0A182IXR9 A0A182W6M6 A0A182L0U5 A0A1S4GXW2 A0A182F4Z8 A0A182U062 U4UP67 A0A182PAV5 A0A182XL86 A0A182MDT3 A0A139WCA6 A0A182RMC4 A0A182QD71 A0A3L8DT95 E2AI67 F4X589 A0A195B857 A0A1Y1N4F1

KEGG

NA

GO

GO:0016021

PANTHER

PTHR35270

Length:

191

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

53.62373

Exp number, first 60 AAs:

14.24516

Total prob of N-in:

0.65645

POSSIBLE N-term signal

sequence

inside

1 - 45

TMhelix

46 - 65

outside

66 - 79

TMhelix

80 - 99

inside

100 - 119

TMhelix

120 - 142

outside

143 - 191

Pi

150.975187

Theta

70.78666

Tajima's D

1.577188

CLR

0.068018

CSRT

0.8023598820059

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics