Gene

KWMTBOMO07058

Pre Gene Modal

BGIBMGA010446

Annotation

PREDICTED:_UBX_domain-containing_protein_1_[Papilio_polytes]

Location

Bomo_Chr12(-):2935011-2938644      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.042

CDS

ATGGCAGAAATACAGACATTGATCGAGATGGGTTTTCCCAAAGAACGAGCAGAAAAAGCTTTAGCCGTGACCAATTATAAGGGTGTAGAGCCTGCCATGGAGTGGCTTTTGGCTCACGCCGAGGACCTCGCAGTATCCTCGGAACCCTCTAATTCACAAGCTGGCGAGTCTTCAGCACCTGTCCCTGATTCAACTCCGGCTCCTTCGACTGAGACTCCTACAGCAGAAGAAAGTGATGCTAAGTCTTTAAAATGCGACGAATGTGGGAAGCTGTTCAAAAATCAAGATGAGATTGAGTACCACGCCGCAAAAACGAATCACAGTAGTTTCTCAGAGTCTACTGAAGAAAAAAAACCATTAACTGAAGAGGAAAAGAAGGCGCAACTGGCGCTCCTAGAAGAGAGAATGAAACAAAAGCGTAAGGAAAGAGAAGAGAGAGAAAAGGCTGAAGCTCTTGATCGTGAACGTGATCGAATCAAGTCTGGTAAAGAATTACAAGATGCCAAGCAACGACTTCAAGAGCAAGAGATGCAAAAACTGGTTGAACAACGAAGGATGGAGAAAATTGAAGACCAGAAGGCTAGAGAACGTGTCCGTGCTCAAATAGAAGCGGACAAACAGGCTAGAAAATTAGCAGCATTAGGAAAAACAGCAGCACCTTCAGTCCCAGCACCCACCCCTGCCGCCATACCAACAACAGCTCCGAACCCCAAAGTATCATATGAGCAAGCAAGAATACAACTGCGATTACCCGACGGAAGGGCTCTTTCACAGACATTTGGAGCTAAAGAACAGTTGTCTGCAGTACGACTGTATTTACAAATGCATGCACATGAATATGCACAATCAGATAACTACAAATTAATGACCACATTTCCAAAAAAAGTATTTACCAGTGAAGATTATGATAAACCTCTGGATTTTTTGGGTCTTGTACCATCTGCAGTGATTATAGTCTCGAAAAGCCAAGGACAGTAG

Protein

MAEIQTLIEMGFPKERAEKALAVTNYKGVEPAMEWLLAHAEDLAVSSEPSNSQAGESSAPVPDSTPAPSTETPTAEESDAKSLKCDECGKLFKNQDEIEYHAAKTNHSSFSESTEEKKPLTEEEKKAQLALLEERMKQKRKEREEREKAEALDRERDRIKSGKELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQARKLAALGKTAAPSVPAPTPAAIPTTAPNPKVSYEQARIQLRLPDGRALSQTFGAKEQLSAVRLYLQMHAHEYAQSDNYKLMTTFPKKVFTSEDYDKPLDFLGLVPSAVIIVSKSQGQ

Uniprot

H9JLP4   A0A2W1BIU2   A0A2A4JB84   A0A194PHZ9   A0A194QPJ3   A0A2H1VM97   + More
A0A212ETA0   A0A1A9WCE8   A0A182GYK1   A0A023EPP2   A0A182H399   A0A0L0C765   Q17M31   A0A1S4EXY1   W8BQN1   A0A182T768   A0A1Q3F7J8   A0A182LZJ0   A0A182RBJ7   A0A182IK84   B3NF71   A0A0K8UGM6   A0A1W4VA98   A0A182WGR7   B4PCD3   A0A0C9PXU5   B0WUA6   A0A034VNQ6   A0A182F2F4   A0A3B0KSS7   B4HIX9   B4QKZ3   A0A1I8MYA1   A0A182JUF9   T1PGF1   Q9VSC5   A0A034VPS0   A0A1B0AQ49   A0A1A9ZMR4   D3TN97   A0A1A9XTW0   Q7Q1D3   A0A1A9UVT2   A0A1L8DSR2   A0A1B6EI22   A0A2J7PU10   U5EYS9   A0A067R9Y2   Q8SYN6   B4KUP8   A0A151WQT8   A0A151J443   A0A151I4Q0   A0A158NZC0   F4W569   A0A195D0X3   A0A0A9XYU0   B4J104   A0A1W4X9R8   A0A336LRM7   A0A1D2MJI9   A0A0F7IQ20   Q29EQ1   B3M5P3   A0A1B6H9G2   V3ZPC9   E0W3T5   A0A026WBR8   A0A0M4EY72   A0A1B0FF42   E2C0H7   B4LHS6   I5AMV1   A0A2P8Z3D9   A0A2S2QZ01   A0A069DSU0   A0A195FTJ1   A0A0P4VW08   T1IQR2   A0A0V0GBB8   A0A154PAS7   C4WS85   A0A0T6AW89   A0A1S3KHC0   E9IUX6   A0A1Q3F7T0   A0A2L2Y1N0   A0A1S3DBA4   A0A1B6KSA6   E9GLL0   A0A0P4WST3   A0A0P5ZSV9   G3MKC6   A0A023GKU8   A0A0P5K2W9   R4G8Q7   A0A2J7PU01   A0A0C9R2K4  

Pubmed

19121390    28756777    26354079    22118469    26483478    24945155    + More
26108605    17510324    24495485    17994087    17550304    25348373    22936249    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20353571    12364791    24845553    21347285    21719571    25401762    26823975    27289101    15632085    23254933    20566863    24508170    30249741    20798317    29403074    26334808    27129103    21282665    26561354    21292972    22216098    26131772   

EMBL

BABH01005299    KZ150015    PZC74982.1    NWSH01002283    PCG68682.1    KQ459603    + More
KPI92942.1    KQ461194    KPJ06895.1    ODYU01003339    SOQ41965.1    AGBW02012613    OWR44722.1    JXUM01097784    JXUM01097785    KQ564370    KXJ72369.1    GAPW01002600    JAC10998.1    JXUM01106933    JXUM01106934    JXUM01106935    KQ565095    KXJ71341.1    JRES01000820    KNC28110.1    CH477209    EAT47713.1    GAMC01014716    JAB91839.1    GFDL01011562    JAV23483.1    AXCM01001931    CH954178    EDV50413.1    GDHF01026500    JAI25814.1    CM000159    EDW93818.1    GBYB01006318    JAG76085.1    DS232103    EDS34878.1    GAKP01014848    JAC44104.1    OUUW01000012    SPP86948.1    CH480815    EDW40633.1    CM000363    CM002912    EDX09626.1    KMY98256.1    KA647846    AFP62475.1    AE014296    AY069272    AAF50499.1    AAL39417.1    GAKP01014850    JAC44102.1    JXJN01001674    EZ422899    ADD19175.1    AAAB01008980    EAA14256.3    GFDF01004568    JAV09516.1    GECZ01032183    JAS37586.1    NEVH01021216    PNF19808.1    GANO01000093    JAB59778.1    KK852649    KDR19499.1    AY071423    AAL49045.1    CH933809    EDW18276.1    KQ982821    KYQ50173.1    KQ980249    KYN17097.1    KQ976448    KYM85864.1    ADTU01004398    GL887605    EGI70665.1    KQ977004    KYN06506.1    GBHO01019581    GBRD01008435    GDHC01008681    JAG24023.1    JAG57386.1    JAQ09948.1    CH916366    EDV96859.1    UFQS01000093    UFQT01000093    SSW99231.1    SSX19611.1    LJIJ01001056    ODM93168.1    KP280173    AKG97523.1    CH379070    EAL30009.1    CH902618    EDV40677.1    GECU01036351    JAS71355.1    KB203149    ESO86202.1    DS235883    EEB20291.1    KK107295    QOIP01000003    EZA53086.1    RLU24918.1    CP012525    ALC43400.1    CCAG010021538    GL451783    EFN78570.1    CH940647    EDW70651.1    CM000070    EIM52286.1    PYGN01000215    PSN51014.1    GGMS01013778    MBY82981.1    GBGD01002152    JAC86737.1    KQ981276    KYN43607.1    GDKW01000336    JAI56259.1    JH431312    GECL01000837    JAP05287.1    KQ434864    KZC09019.1    ABLF02024439    ABLF02024440    AK340086    BAH70755.1    LJIG01022683    KRT79268.1    GL766096    EFZ15623.1    GFDL01011448    JAV23597.1    IAAA01009229    LAA02048.1    GEBQ01025672    JAT14305.1    GL732551    EFX79529.1    GDRN01028418    JAI67617.1    GDIP01043208    LRGB01000626    JAM60507.1    KZS17603.1    JO842327    AEO33944.1    GBBM01001665    JAC33753.1    GDIQ01189980    JAK61745.1    ACPB03020875    GAHY01000552    JAA76958.1    PNF19809.1    GBZX01001480    JAG91260.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000091820    + More
UP000069940    UP000249989    UP000037069    UP000008820    UP000075901    UP000075883    UP000075900    UP000075880    UP000008711    UP000192221    UP000075920    UP000002282    UP000002320    UP000069272    UP000268350    UP000001292    UP000000304    UP000095301    UP000075881    UP000000803    UP000092460    UP000092445    UP000092443    UP000007062    UP000078200    UP000235965    UP000027135    UP000009192    UP000075809    UP000078492    UP000078540    UP000005205    UP000007755    UP000078542    UP000001070    UP000192223    UP000094527    UP000001819    UP000007801    UP000030746    UP000009046    UP000053097    UP000279307    UP000092553    UP000092444    UP000008237    UP000008792    UP000245037    UP000078541    UP000076502    UP000007819    UP000085678    UP000079169    UP000000305    UP000076858    UP000015103   

PRIDE

H9JLP4    Q9VSC5    Q8SYN6   

Pfam

PF00789   UBX        + More
PF00627   UBA
PF04502   DUF572

Interpro

IPR015940   UBA        + More
IPR041923   UBA_UBXN1       
IPR013087   Znf_C2H2_type       
IPR029071   Ubiquitin-like_domsf       
IPR001012   UBX_dom       
IPR009060   UBA-like_sf       
IPR007590   Saf4/Yju2       

SUPFAM

SSF54236   SSF54236        + More
SSF46934   SSF46934       

CDD

cd14302  UBA_UBXN1

ProteinModelPortal

H9JLP4   A0A2W1BIU2   A0A2A4JB84   A0A194PHZ9   A0A194QPJ3   A0A2H1VM97   + More
A0A212ETA0   A0A1A9WCE8   A0A182GYK1   A0A023EPP2   A0A182H399   A0A0L0C765   Q17M31   A0A1S4EXY1   W8BQN1   A0A182T768   A0A1Q3F7J8   A0A182LZJ0   A0A182RBJ7   A0A182IK84   B3NF71   A0A0K8UGM6   A0A1W4VA98   A0A182WGR7   B4PCD3   A0A0C9PXU5   B0WUA6   A0A034VNQ6   A0A182F2F4   A0A3B0KSS7   B4HIX9   B4QKZ3   A0A1I8MYA1   A0A182JUF9   T1PGF1   Q9VSC5   A0A034VPS0   A0A1B0AQ49   A0A1A9ZMR4   D3TN97   A0A1A9XTW0   Q7Q1D3   A0A1A9UVT2   A0A1L8DSR2   A0A1B6EI22   A0A2J7PU10   U5EYS9   A0A067R9Y2   Q8SYN6   B4KUP8   A0A151WQT8   A0A151J443   A0A151I4Q0   A0A158NZC0   F4W569   A0A195D0X3   A0A0A9XYU0   B4J104   A0A1W4X9R8   A0A336LRM7   A0A1D2MJI9   A0A0F7IQ20   Q29EQ1   B3M5P3   A0A1B6H9G2   V3ZPC9   E0W3T5   A0A026WBR8   A0A0M4EY72   A0A1B0FF42   E2C0H7   B4LHS6   I5AMV1   A0A2P8Z3D9   A0A2S2QZ01   A0A069DSU0   A0A195FTJ1   A0A0P4VW08   T1IQR2   A0A0V0GBB8   A0A154PAS7   C4WS85   A0A0T6AW89   A0A1S3KHC0   E9IUX6   A0A1Q3F7T0   A0A2L2Y1N0   A0A1S3DBA4   A0A1B6KSA6   E9GLL0   A0A0P4WST3   A0A0P5ZSV9   G3MKC6   A0A023GKU8   A0A0P5K2W9   R4G8Q7   A0A2J7PU01   A0A0C9R2K4  

PDB

1WHC     E-value=8.67654e-08,     Score=134

KEGG

101746859    no KO assigned | (RefSeq) UBX domain-containing protein 1

GO

GO:0003676   GO:0005737   GO:0005634   GO:0046872   GO:0005515   GO:0003700   GO:0008270   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

Length:

325

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00319

Exp number, first 60 AAs:

0.00017

Total prob of N-in:

0.01418

outside

1  -  325

 

 

Pi

189.121703

Theta

140.424239

Tajima's D

0.821541

CLR

0.179982

CSRT

0.609369531523424

Interpretation

Uncertain