Gene

KWMTBOMO07057  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010520

Annotation

PREDICTED:_ribonuclease_Oy_[Papilio_machaon]

Location

Bomo_Chr12(+):2931405-2933563      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.395 Extracellular   Reliability : 1.495

CDS

ATGTGGAGAAATTTGAGTTATGCTATATTTTTGCTGTCGTGTTTTACATATGCAGAACTAAGCGACACAAAAAATAATGAGTGGGATTTTCTAATATTCACGCAACACTGGCCGGCGACTATATGCAGAATATGGATGGAGAAACCTACGCACTCTTGTATTATGCCACACGAGCAGAATTCATGGACTATTCATGGTATATGGCCAAATAAAAATCACTCCATGGGACCATTTTTCTGTAATAAGACTTGGTCATTTGACCCTGATCAAGTTAAATCTATTGAAACAGACTTGGAAGAATCTTGGGGCAATATTGAGAAAGAACAATCATTGTACAGTTTATGGGCCCACGAATGGACAAAACACGGTACTTGCGCCGCATCAATCGAGCCCCTTAACTGCGAGCTGAAATACTTCACGAAAGGGTTAGAATGGCTGAAAAAGTATACCATGAAAAATATTTTGAACAATGCAGGTATCACCCCTTCAGACATGAAAGAGTACAAAGCTATTGATTTTCATAATGCTGTGAAAACTAAACTTGGATTTAAACCAATGGTTGAATGTCACAAAGTTGACGGTAAACAATTCTTGTTTGAAATACGCATATGCTTCTCAAAGTCACTTGAATTGATTGACTGTGAAGATACACATATGACTAATACGGATATTATTACGAATTGTAAGCCAACTGAAGGGATTATATATCCGGTAAATGAGAAACCTCCCAAAAGATATTTGATACAGCTTCATAGATTATTGTCATGGTTACGTTGGTTCACAGTGTAA

Protein

MWRNLSYAIFLLSCFTYAELSDTKNNEWDFLIFTQHWPATICRIWMEKPTHSCIMPHEQNSWTIHGIWPNKNHSMGPFFCNKTWSFDPDQVKSIETDLEESWGNIEKEQSLYSLWAHEWTKHGTCAASIEPLNCELKYFTKGLEWLKKYTMKNILNNAGITPSDMKEYKAIDFHNAVKTKLGFKPMVECHKVDGKQFLFEIRICFSKSLELIDCEDTHMTNTDIITNCKPTEGIIYPVNEKPPKRYLIQLHRLLSWLRWFTV

Similarity

Belongs to the RNase T2 family.

Uniprot

H9JLW8   A0A2H1VND0   A0A2W1BMY3   A0A2A4J987   A0A3S2LQR4   A0A194QNG1   + More
A0A194PIR6   I4DQ25   A0A212ETF2   A0A0L7KA08   S4PX45   A0A1B6DBJ7   A0A088AN65   A0A1B0CEA7   W8B448   A0A2A4J9C6   A0A2P8Z3D4   A0A1B6MA73   A0A2W1BTC8   A0A1B6I0C2   A0A1B6JJ87   B4KUP5   A0A0A1XLT4   A0A1J1I4U7   A0A336MN48   E9GQD7   B4LHS3   B4PCD0   D3TLW3   A0A1B0DAP6   A0A1L8DPQ1   B4QKZ0   A0A0L0BPC5   A0A1A9ZMR2   A0A1L8DXL4   U5EP87   B4HIX6   Q95TA4   A0A1W4VNI4   A0A0P5FWM6   A0A0P6AGE2   A0A0P6JJU3   Q9VSC3   Q24485   Q5U199   A0A336M662   B3NF74   A0A0P5M3G1   A0A2J7PTZ5   A0A067RJE8   A0A0P5LAE3   A0A0P5GJK9   A0A034VRC3   A0A0N8CV52   A0A0M4EJW8   B4J107   A0A0N1ITF6   A0A0K8WAA3   A0A0P5C0W7   A0A0N8A6Q3   A0A1A9WCE6   A0A1A9UVT1   Q29EP9   A0A1B6FQF4   A0A1Q3FNT2   A0A0L7RDF1   F4W570   B4H2B9   B3M5P6   Q1HQZ4   A0A1W4X0F2   A0A3B0K2R9   A0A158NYY0   A0A023ENC4   A0A1B0AQ50   A0A2A3EE73   A0A1W6EWB1   A0A1A9XTW2   B4N5I7   A0A2M3Z635   A0A1S3IDK3   A0A2M3Z6X1   B0WUA5   T1PE88   A0A1I8M8I6   A0A2M4AIE7   A0A2M4AI59   T1GHR4   W5J922   A0A195D0W7   A0A0T6AVS1   A0A0P4VI06   A0A0A9Z961   A0A146KWQ2   A0A0V0G625   E9IUX5   T1IEB5   A0A224XGW2   A0A232EJ98   U4UBW7  

Pubmed

19121390    28756777    26354079    22651552    22118469    26227816    + More
23622113    24495485    29403074    17994087    25830018    21292972    17550304    20353571    22936249    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    7607542    24845553    25348373    15632085    21719571    17204158    17510324    21347285    24945155    25315136    20920257    23761445    27129103    25401762    26823975    21282665    28648823    23537049   

EMBL

BABH01005299    ODYU01003339    SOQ41962.1    KZ150015    PZC74985.1    NWSH01002283    + More
PCG68687.1    RSAL01000028    RVE51874.1    KQ461194    KPJ06894.1    KQ459603    KPI92943.1    AK403899    BAM20015.1    AGBW02012613    OWR44721.1    JTDY01010212    KOB59940.1    GAIX01005678    JAA86882.1    GEDC01014288    JAS23010.1    AJWK01008710    GAMC01014717    JAB91838.1    PCG68685.1    PYGN01000215    PSN51011.1    GEBQ01031434    GEBQ01007156    JAT08543.1    JAT32821.1    PZC74983.1    GECU01037365    GECU01027343    GECU01020107    GECU01012462    JAS70341.1    JAS80363.1    JAS87599.1    JAS95244.1    GECU01033845    GECU01032693    GECU01028046    GECU01008507    JAS73861.1    JAS75013.1    JAS79660.1    JAS99199.1    CH933809    EDW18273.1    GBXI01002375    JAD11917.1    CVRI01000037    CRK93401.1    UFQS01000824    UFQT01000824    SSX07065.1    SSX27408.1    GL732558    EFX78360.1    CH940647    EDW70648.1    CM000159    EDW93815.1    CCAG010021538    EZ422415    ADD18691.1    AJVK01004585    GFDF01005665    JAV08419.1    CM000363    CM002912    EDX09623.1    KMY98252.1    JRES01001665    JRES01000968    KNC21079.1    KNC26671.1    GFDF01002935    JAV11149.1    GANO01000265    JAB59606.1    CH480815    EDW40630.1    AY060258    AAL25297.1    GDIQ01249372    JAK02353.1    GDIP01029745    JAM73970.1    GDIQ01005229    JAN89508.1    AE014296    AAF50502.1    X74932    CAA52884.1    BT015993    AAV36878.1    UFQS01000610    UFQT01000610    SSX05344.1    SSX25705.1    CH954178    EDV50416.1    GDIQ01161110    JAK90615.1    NEVH01021216    PNF19797.1    KK852649    KDR19500.1    GDIQ01182554    JAK69171.1    GDIQ01239580    JAK12145.1    GAKP01014851    GAKP01014849    GAKP01014847    JAC44103.1    GDIP01095831    JAM07884.1    CP012525    ALC43397.1    CH916366    EDV96862.1    KQ435824    KOX72128.1    GDHF01004191    JAI48123.1    GDIP01177114    JAJ46288.1    GDIP01177113    JAJ46289.1    CH379070    EAL30011.2    GECZ01017341    JAS52428.1    GFDL01005897    JAV29148.1    KQ414613    KOC69007.1    GL887605    EGI70666.1    CH479203    EDW30471.1    CH902618    EDV40680.2    DQ440300    CH477209    ABF18333.1    EAT47712.1    OUUW01000012    SPP86952.1    ADTU01004398    GAPW01002680    GEHC01000533    JAC10918.1    JAV47112.1    JXJN01001674    KZ288269    PBC30010.1    KY563593    ARK20002.1    CH964101    EDW79626.1    GGFM01003231    MBW23982.1    GGFM01003437    MBW24188.1    DS232103    EDS34877.1    KA647092    AFP61721.1    GGFK01007196    MBW40517.1    GGFK01006977    MBW40298.1    CAQQ02054978    ADMH02001841    ETN60942.1    KQ977004    KYN06507.1    LJIG01022683    KRT79267.1    GDKW01003212    JAI53383.1    GBHO01005259    GBRD01000269    JAG38345.1    JAG65552.1    GDHC01017715    JAQ00914.1    GECL01002622    JAP03502.1    GL766096    EFZ15615.1    ACPB03020873    GFTR01004689    JAW11737.1    NNAY01004054    OXU18440.1    KB632191    ERL89818.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000005203    UP000092461    UP000245037    UP000009192    UP000183832    UP000000305    UP000008792    UP000002282    UP000092444    UP000092462    UP000000304    UP000037069    UP000092445    UP000001292    UP000192221    UP000000803    UP000008711    UP000235965    UP000027135    UP000092553    UP000001070    UP000053105    UP000091820    UP000078200    UP000001819    UP000053825    UP000007755    UP000008744    UP000007801    UP000008820    UP000192223    UP000268350    UP000005205    UP000092460    UP000242457    UP000092443    UP000007798    UP000085678    UP000002320    UP000095301    UP000015102    UP000000673    UP000078542    UP000015103    UP000215335    UP000030742   

PRIDE

H9JLW8    Q95TA4    Q9VSC3    Q24485    Q5U199   

Pfam

PF00445   Ribonuclease_T2        + More
PF12796   Ank_2
PF00005   ABC_tran
PF01061   ABC2_membrane

Interpro

IPR036430   RNase_T2-like_sf        + More
IPR001568   RNase_T2-like       
IPR033130   RNase_T2_His_AS_2       
IPR033697   Ribonuclease_T2_eukaryotic       
IPR020683   Ankyrin_rpt-contain_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR002110   Ankyrin_rpt       
IPR003593   AAA+_ATPase       
IPR003439   ABC_transporter-like       
IPR017871   ABC_transporter_CS       
IPR027417   P-loop_NTPase       
IPR018188   RNase_T2_His_AS_1       
IPR013525   ABC_2_trans       

SUPFAM

SSF55895   SSF55895        + More
SSF48403   SSF48403       
SSF52540   SSF52540       

Gene 3D

3.90.730.10     1.25.40.20    

CDD

cd01061  RNase_T2_euk
cd00204  ANK

ProteinModelPortal

H9JLW8   A0A2H1VND0   A0A2W1BMY3   A0A2A4J987   A0A3S2LQR4   A0A194QNG1   + More
A0A194PIR6   I4DQ25   A0A212ETF2   A0A0L7KA08   S4PX45   A0A1B6DBJ7   A0A088AN65   A0A1B0CEA7   W8B448   A0A2A4J9C6   A0A2P8Z3D4   A0A1B6MA73   A0A2W1BTC8   A0A1B6I0C2   A0A1B6JJ87   B4KUP5   A0A0A1XLT4   A0A1J1I4U7   A0A336MN48   E9GQD7   B4LHS3   B4PCD0   D3TLW3   A0A1B0DAP6   A0A1L8DPQ1   B4QKZ0   A0A0L0BPC5   A0A1A9ZMR2   A0A1L8DXL4   U5EP87   B4HIX6   Q95TA4   A0A1W4VNI4   A0A0P5FWM6   A0A0P6AGE2   A0A0P6JJU3   Q9VSC3   Q24485   Q5U199   A0A336M662   B3NF74   A0A0P5M3G1   A0A2J7PTZ5   A0A067RJE8   A0A0P5LAE3   A0A0P5GJK9   A0A034VRC3   A0A0N8CV52   A0A0M4EJW8   B4J107   A0A0N1ITF6   A0A0K8WAA3   A0A0P5C0W7   A0A0N8A6Q3   A0A1A9WCE6   A0A1A9UVT1   Q29EP9   A0A1B6FQF4   A0A1Q3FNT2   A0A0L7RDF1   F4W570   B4H2B9   B3M5P6   Q1HQZ4   A0A1W4X0F2   A0A3B0K2R9   A0A158NYY0   A0A023ENC4   A0A1B0AQ50   A0A2A3EE73   A0A1W6EWB1   A0A1A9XTW2   B4N5I7   A0A2M3Z635   A0A1S3IDK3   A0A2M3Z6X1   B0WUA5   T1PE88   A0A1I8M8I6   A0A2M4AIE7   A0A2M4AI59   T1GHR4   W5J922   A0A195D0W7   A0A0T6AVS1   A0A0P4VI06   A0A0A9Z961   A0A146KWQ2   A0A0V0G625   E9IUX5   T1IEB5   A0A224XGW2   A0A232EJ98   U4UBW7  

PDB

3T0O     E-value=5.98448e-26,     Score=290

KEGG

101746995    K01166 ribonuclease T2 [EC:4.6.1.19] | (RefSeq) ribonuclease Oy

GO

GO:0003723   GO:0033897   GO:0016021   GO:0005576   GO:0004521   GO:0006401   GO:0005615   GO:0004540   GO:0032504   GO:0005524   GO:0016887   GO:0016747   GO:0003700   GO:0005634   GO:0008270   GO:0005515   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

PANTHER

PTHR11240  

SignalP

Position:   1 - 18,         Likelihood:  0.986120

 

 

Length:

262

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10163

Exp number, first 60 AAs:

0.10163

Total prob of N-in:

0.04444

outside

1  -  262

 

 

Pi

177.807095

Theta

143.53233

Tajima's D

0.35451

CLR

0.071134

CSRT

0.475126243687816

Interpretation

Uncertain