Gene

KWMTBOMO07047

Pre Gene Modal

BGIBMGA010450

Annotation

PREDICTED:_uncharacterized_protein_LOC105842101_[Bombyx_mori]

Location

Bomo_Chr12(-):2728572-2729234      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.543 Nuclear   Reliability : 2.208

CDS

ATGTCATCTTGGGCAGAGAATTTCACAACTGCAGCGACTTGGCAATTGAAACACCAAATCGCTTATTGGAAGTCAAAAGCGAAGGCATTGGAATATGAAAACAAACTACTACATGATATTATTAAGAAAAATTACACAAGCGACCTTCCTGTACAGGAACAAAAGGTCAAGAAAGAACAAAGTTTGAAACACGAGTCTAATATCGACGACGAAGAAATTTGCGAAGAAAATAATGAAATTGAAGTGAGCGAGGAGTTTATACAGTTTTTGAAAGATAATGCGAAGTTTAAAGAAGACGCTAGACTGGAACGCGAAAAGTTAAAAACCAAGTTAGATTCAGAAAATCCCCAGGATGCAAACATGTCTGAGCCTTCTAACAAAGCAGAGAGTTCTGAGGAAAAATTAAAGGCCTTGTATGGAAAAGATTGGCAGAGGATGTGTGCTTTAGAAATGTCACTAGAATGTGAGTTTTTAGATTCCTGTGAAAGAGATAAACCTATGCATTGGCCCAACATACCATTCAATTTCAATTTTAGTTGA

Protein

MSSWAENFTTAATWQLKHQIAYWKSKAKALEYENKLLHDIIKKNYTSDLPVQEQKVKKEQSLKHESNIDDEEICEENNEIEVSEEFIQFLKDNAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKALYGKDWQRMCALEMSLECEFLDSCERDKPMHWPNIPFNFNFS

Uniprot

H9JLP8   A0A2H1W6X2   A0A2W1BIV0   A0A194PIS3   A0A194QNF6   A0A1E1WVT3   + More
A0A212FIA9   S4PTG3   A0A0L7RDX6   A0A067RMM0   A0A0C9RJ36   A0A1B6L7J7   A0A1B6LB74   A0A2A3EHJ7   A0A088AN24   A0A1B6L9L4   A0A0J7L6S6   A0A154PAR2   A0A0N0BEU1   E2C0G9   E9IQK5   A0A232EVQ4   D2A0X8   A0A026VU22   A0A026WAS2   A0A1B6J2X7   D2A0N0  

Pubmed

19121390    28756777    26354079    22118469    23622113    24845553    + More
20798317    21282665    28648823    18362917    19820115    24508170    30249741   

EMBL

BABH01005279    ODYU01006707    SOQ48797.1    KZ150015    PZC74992.1    KQ459603    + More
KPI92948.1    KQ461194    KPJ06889.1    GDQN01010964    GDQN01000163    JAT80090.1    JAT90891.1    AGBW02008401    OWR53474.1    GAIX01012088    JAA80472.1    KQ414613    KOC69010.1    KK852532    KDR21855.1    GBYB01008245    GBYB01008246    JAG78012.1    JAG78013.1    GEBQ01020386    JAT19591.1    GEBQ01019027    JAT20950.1    KZ288245    PBC31190.1    GEBQ01019611    JAT20366.1    LBMM01000433    KMQ98371.1    KQ434864    KZC09026.1    KQ435824    KOX72122.1    GL451783    EFN78562.1    GL764834    EFZ17157.1    NNAY01001967    OXU22427.1    KQ971338    EFA01612.2    KK111572    EZA46354.1    KK107295    QOIP01000003    EZA53078.1    RLU24921.1    GECU01014180    JAS93526.1    EFA02533.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000007151    UP000053825    UP000027135    + More
UP000242457    UP000005203    UP000036403    UP000076502    UP000053105    UP000008237    UP000215335    UP000007266    UP000053097    UP000279307   

PRIDE

H9JLP8   

Pfam

PF15348   GEMIN8        + More
PF00028   Cadherin
PF12947   EGF_3
PF07645   EGF_CA
PF00058   Ldl_recept_b
PF07474   G2F
PF12068   PH_RBD
PF00566   RabGAP-TBC
PF06119   NIDO

Interpro

IPR034754   GEMIN8        + More
IPR002126   Cadherin-like_dom       
IPR015919   Cadherin-like_sf       
IPR020894   Cadherin_CS       
IPR000152   EGF-type_Asp/Asn_hydroxyl_site       
IPR011042   6-blade_b-propeller_TolB-like       
IPR000742   EGF-like_dom       
IPR013032   EGF-like_CS       
IPR000195   Rab-GTPase-TBC_dom       
IPR006605   G2_nidogen/fibulin_G2F       
IPR021935   SGSM1/2_RBD       
IPR003886   NIDO_dom       
IPR035969   Rab-GTPase_TBC_sf       
IPR009017   GFP       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR024731   EGF_dom       
IPR001881   EGF-like_Ca-bd_dom       
IPR000033   LDLR_classB_rpt       

SUPFAM

SSF49313   SSF49313        + More
SSF54511   SSF54511       
SSF57184   SSF57184       
SSF47923   SSF47923       

Gene 3D

2.120.10.30    

ProteinModelPortal

H9JLP8   A0A2H1W6X2   A0A2W1BIV0   A0A194PIS3   A0A194QNF6   A0A1E1WVT3   + More
A0A212FIA9   S4PTG3   A0A0L7RDX6   A0A067RMM0   A0A0C9RJ36   A0A1B6L7J7   A0A1B6LB74   A0A2A3EHJ7   A0A088AN24   A0A1B6L9L4   A0A0J7L6S6   A0A154PAR2   A0A0N0BEU1   E2C0G9   E9IQK5   A0A232EVQ4   D2A0X8   A0A026VU22   A0A026WAS2   A0A1B6J2X7   D2A0N0  

KEGG

105842101    no KO assigned | (RefSeq) uncharacterized LOC105842101

GO

GO:0032797   GO:0000387   GO:0005509   GO:0005886   GO:0007156   GO:0016021   GO:0007160   GO:0016020   GO:0034719  

PANTHER

PTHR16238  

Length:

179

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00015

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.12926

outside

1  -  179

 

 

Pi

173.727892

Theta

192.222082

Tajima's D

-0.524919

CLR

190.773215

CSRT

0.234788260586971

Interpretation

Uncertain