Gene

KWMTBOMO07037

Pre Gene Modal

BGIBMGA010512

Annotation

Uncharacterized_protein_OBRU01_18342_[Operophtera_brumata]

Location

Bomo_Chr12(+):2293010-2293684      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.709

CDS

ATGGAAAATTGTCTAAAGAATAAAGTGGTCATTGTGACTGGAAGCAGTTCCGGTATTGGAGAAGCTATTGCTGTAGAATTAGTATCTCAAGGAGCAAAAGTTGCTATAATTGGTAGAAGAGAACATAAACTGAAATTAGTAGCAGCAAGATGTGAACTAGTTGGTAAAAAGACATTGGCAATCAGGGCAGATGTGACTAAAGATGATGATAGAAGAATGATCATTAAAAGGACAATAAAACATTTTGGGAAGTTAAATGTGCTTGTGAATTGTGCTGGTGTAGCCAAATTCATCAGTATTTTGTCCAATGAAGCAATTGAAATGTTTGATGAAGCTTTGTCCATCAATCTTCGATCCATTGTGCATTTGGTTCATCTTTCGGCTTCATATTTGATTGCAAGTAAAGGATCCATTAATAATATTGGAAGTGTTGGAGGTATCGCTCCGATAGCGTCTGAGAAATTTTCTTACTGTATTTCCAAGGCTGCATTACATCATTTTAAGAAATGTTTGGCTTTAGAGCTGGCTAGTAAGAATGTCCGAGTGAATCTTATTGCCCCGGGCCCAGTGAGAACATATACCAGATTCAAACCGACCACTTAA

Protein

MENCLKNKVVIVTGSSSGIGEAIAVELVSQGAKVAIIGRREHKLKLVAARCELVGKKTLAIRADVTKDDDRRMIIKRTIKHFGKLNVLVNCAGVAKFISILSNEAIEMFDEALSINLRSIVHLVHLSASYLIASKGSINNIGSVGGIAPIASEKFSYCISKAALHHFKKCLALELASKNVRVNLIAPGPVRTYTRFKPTT

Similarity

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Uniprot

H9JLW0   A0A2H1WTS2   A0A0L7KZ86   A0A0L7LH86   A0A2A4JIH1   A0A2H1X3K0   + More
A0A2A4JHX2   H9JHN5   A0A2H1X3T6   A0A2A4IZG3   A0A2A4ITT1   I4DS66   A0A0N0PC39   A0A2H1VBR9   A0A2H1WUW2   A0A2A4JIX4   A0A2A4JH23   A0A212ETR6   A0A0N1PFW5   A0A194PIN0   A0A194PXT8   A0A0N0PB24   A0A2A4J0E8   A0A194PJG5   A0A0L7KLX4   A0A0N1IFH9   A0A2A4JHN9   A0A194PR87   A0A194PID7   A0A2A4J134   A0A2H1WFW5   A0A212EP45   A0A0L7KN57   D2SNW1   A0A194PT74   A0A212EJ88   A0A2W1BUV9   A0A2A4IZU2   A0A2H1WS78   Q9NBB5   A0A212EJ84   A0A194PKC3   A0A0L7KSS2   A0A0L7LK01   A0A2H1VC89   A0A2H1WMX1   A0A1Q3G5G6   A0A0L7KPN2   A0A2W1BZ77   A0A2A4J612   A0A0L7LIU8   A0A0L7KSR6   A0A2W1BSW8   A0A0N0PAS3   A0A2H1VAH5   A0A2H1VYS0   H9JUE7   A0A194PHJ7   I4DQC6   H6AGY1   A0A2A4JIE3   H9JUQ7   A0A0N1IGV7   I4DPW2   A0A2H1VFS6   A0A2A4K5A7   H9JUI0   H9JUK8   A0A0N1IIA2   H9JUQ8   R7UCY2   A0A1Q3G5H6   A0A212F231   A0A1B6HST6   H9JG62   V3ZL06   A0A1S4FIL2   A0A1S3IQP8   A0A0N0PET2   H9JKZ2   A0A132AEX4   A0A194Q286   A0A194RRD7   A0A212F276   A0A194PZN2   A0A182GNQ0   A0A182G1S1   A0A0N0PDP5   A0A0N1IDX2   Q16ZI6   A0A1J1IKD1   A0A158NTG1   A0A1S3IQ98   A0A0L8HGD3   A0A158NTI2   A0A1Q3G5L3   A0A194PPC7   K1QNK4   A0A182G1S0   F4WG13  

Pubmed

19121390    26227816    22651552    26354079    22118469    20074338    + More
28756777    10861234    23254933    26555130    26483478    17510324    21347285    22992520    21719571   

EMBL

BABH01005252    ODYU01010994    SOQ56451.1    JTDY01004206    KOB68460.1    JTDY01001151    + More
KOB74729.1    NWSH01001398    PCG71374.1    ODYU01012735    SOQ59194.1    PCG71376.1    BABH01012981    ODYU01013212    SOQ59906.1    NWSH01004416    PCG65151.1    NWSH01006959    PCG63175.1    AK405443    BAM20756.1    KQ460655    KPJ12937.1    ODYU01001522    SOQ37852.1    ODYU01011234    SOQ56848.1    PCG71373.1    PCG71375.1    AGBW02012537    OWR44869.1    KQ461178    KPJ07786.1    KQ459602    KPI93177.1    KQ459595    KPI95965.1    KPJ07785.1    PCG65148.1    KPI93178.1    JTDY01009080    KOB64125.1    KPJ12939.1    NWSH01001353    PCG71567.1    KPI95966.1    KPI93176.1    PCG65150.1    ODYU01008068    SOQ51354.1    AGBW02013539    OWR43254.1    JTDY01008777    KOB64404.1    EZ407245    ACX53802.1    KPI95964.1    AGBW02014512    OWR41545.1    KZ149910    PZC78151.1    PCG65149.1    ODYU01010604    SOQ55826.1    AF255341    AAF70499.1    OWR41546.1    KPI93179.1    JTDY01006084    KOB66312.1    JTDY01000816    KOB75772.1    SOQ37854.1    ODYU01009744    SOQ54378.1    GEYN01000194    JAV44795.1    JTDY01007623    KOB65070.1    PZC78150.1    NWSH01003146    PCG66863.1    JTDY01000942    KOB75350.1    KOB66313.1    PZC78149.1    KPJ07784.1    SOQ37853.1    ODYU01005275    SOQ45968.1    BABH01022835    KQ459604    KPI92523.1    AK404043    BAM20116.1    JF433973    AEM17060.1    PCG71569.1    KPJ12938.1    AK403809    BAM19952.1    ODYU01002131    SOQ39232.1    NWSH01000134    PCG79206.1    BABH01022636    BABH01022634    BABH01022635    KQ460317    KPJ16010.1    AMQN01008323    KB302824    ELU03849.1    GEYN01000184    JAV44805.1    AGBW02010784    OWR47781.1    GECU01029959    JAS77747.1    BABH01002061    KB203357    ESO84957.1    KQ459717    KPJ20326.1    BABH01011332    JXLN01013636    KPM09493.1    KQ459579    KPI99448.1    KQ459765    KPJ20037.1    AGBW02010783    OWR47824.1    KQ459582    KPI98781.1    JXUM01076841    KQ562972    KXJ74735.1    JXUM01038914    KQ561184    KXJ79439.1    KQ460254    KPJ16339.1    KQ460650    KPJ13113.1    CH477489    EAT40088.1    CVRI01000054    CRL00218.1    ADTU01025891    KQ418194    KOF88292.1    ADTU01025889    ADTU01025890    GEYN01000185    JAV44804.1    KQ459596    KPI95296.1    JH819182    EKC38462.1    JXUM01038912    KXJ79438.1    GL888128    EGI66780.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000007151    UP000053268    + More
UP000014760    UP000030746    UP000085678    UP000069940    UP000249989    UP000008820    UP000183832    UP000005205    UP000053454    UP000005408    UP000007755   

PRIDE

H9JLW0    H9JHN5    H9JUE7    H6AGY1    H9JUQ7    H9JUI0    + More
H9JUK8    H9JUQ8    H9JG62    H9JKZ2   

Pfam

PF00106   adh_short        + More
PF00292   PAX

Interpro

IPR036291   NAD(P)-bd_dom_sf        + More
IPR020904   Sc_DH/Rdtase_CS       
IPR002347   SDR_fam       
IPR036388   WH-like_DNA-bd_sf       
IPR009057   Homeobox-like_sf       
IPR001523   Paired_dom       

SUPFAM

SSF51735   SSF51735        + More
SSF46689   SSF46689       

Gene 3D

1.10.10.10    

ProteinModelPortal

H9JLW0   A0A2H1WTS2   A0A0L7KZ86   A0A0L7LH86   A0A2A4JIH1   A0A2H1X3K0   + More
A0A2A4JHX2   H9JHN5   A0A2H1X3T6   A0A2A4IZG3   A0A2A4ITT1   I4DS66   A0A0N0PC39   A0A2H1VBR9   A0A2H1WUW2   A0A2A4JIX4   A0A2A4JH23   A0A212ETR6   A0A0N1PFW5   A0A194PIN0   A0A194PXT8   A0A0N0PB24   A0A2A4J0E8   A0A194PJG5   A0A0L7KLX4   A0A0N1IFH9   A0A2A4JHN9   A0A194PR87   A0A194PID7   A0A2A4J134   A0A2H1WFW5   A0A212EP45   A0A0L7KN57   D2SNW1   A0A194PT74   A0A212EJ88   A0A2W1BUV9   A0A2A4IZU2   A0A2H1WS78   Q9NBB5   A0A212EJ84   A0A194PKC3   A0A0L7KSS2   A0A0L7LK01   A0A2H1VC89   A0A2H1WMX1   A0A1Q3G5G6   A0A0L7KPN2   A0A2W1BZ77   A0A2A4J612   A0A0L7LIU8   A0A0L7KSR6   A0A2W1BSW8   A0A0N0PAS3   A0A2H1VAH5   A0A2H1VYS0   H9JUE7   A0A194PHJ7   I4DQC6   H6AGY1   A0A2A4JIE3   H9JUQ7   A0A0N1IGV7   I4DPW2   A0A2H1VFS6   A0A2A4K5A7   H9JUI0   H9JUK8   A0A0N1IIA2   H9JUQ8   R7UCY2   A0A1Q3G5H6   A0A212F231   A0A1B6HST6   H9JG62   V3ZL06   A0A1S4FIL2   A0A1S3IQP8   A0A0N0PET2   H9JKZ2   A0A132AEX4   A0A194Q286   A0A194RRD7   A0A212F276   A0A194PZN2   A0A182GNQ0   A0A182G1S1   A0A0N0PDP5   A0A0N1IDX2   Q16ZI6   A0A1J1IKD1   A0A158NTG1   A0A1S3IQ98   A0A0L8HGD3   A0A158NTI2   A0A1Q3G5L3   A0A194PPC7   K1QNK4   A0A182G1S0   F4WG13  

PDB

1XKQ     E-value=1.66367e-24,     Score=275

KEGG

101738856    no KO assigned | (RefSeq) dehydrogenase/reductase SDR family member 2, mitochondrial-like

GO

GO:0016491   GO:0016021   GO:0005634   GO:0007275   GO:0003677   GO:0006355   GO:0007186   GO:0004965   GO:0030286   GO:0005515   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

Subcellular location

Nucleus  

Length:

200

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.83871999999999

Exp number, first 60 AAs:

0.28731

Total prob of N-in:

0.41589

outside

1  -  200

 

 

Pi

262.682539

Theta

209.037625

Tajima's D

0.807917

CLR

0

CSRT

0.608269586520674

Interpretation

Uncertain