Gene

KWMTBOMO07029

Pre Gene Modal

BGIBMGA010460

Annotation

PREDICTED:_gamma-aminobutyric_acid_type_B_receptor_subunit_2_[Bombyx_mori]

Location

Bomo_Chr12(-):2056850-2110559      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.343

CDS

ATGTACGAGCCAAATATATCAAACGAAACAAATATATTGAATGAAAATTTTAATGACTTAACGAACAACACCAATAATGAGTTTTCAGAAGACGTTCACGAATTTATTGGTACAGTGAAACTGGAAAATATAACTAAAGATCTAATCACTGATTTTAATGCAACAATATCTGAATCTAATGAATCAGATATTGGTGACGATTTAAAAGCTATAGAAATAGGTGTACTTAATATAGAAAATAAAGATAATTCAATGGAAAAACTCAGAGTCGATGACGTAACGAGAACTAAAATATTTTACGATTTTTCGACCACAGTCAACAAGAAAGATGACAGAAATTTAATTACTAATGAAACGTTTACAGTAAAATTCAATTTAGATAAAAACAAAACGACTGAGGCCAAAATACGTGACTTAAAGAATTATCCGAGCGGATCTTTTCATCCTATCCTAAATCCTCCCGCTCAAATTACGGACGTGAATACTTCTAGTTCAACTTTTATAAACGAATTACCAAGAGCCACAACCAGCCGCGTCGTGTCTATCCTCGGTCTCTTCGAGTTGTCTGTGGGAGATACACCAAGAGTGGACGGAGCATCAGAGCTCGCTGCTGCCAAGCTCGCAGTGGAACATGTCAACAAAAGGAACCTACTCCCTGGGTATAAGTTGCATCTCATCACCAATGACACAAAGTGCGATCCAGGTGTGGGCGTGGATAGGTTCTTTCACGCCCTCTACACGGAGCGGGAGTCAAGAATGGTCATGCTGCTGGGGACTGCTTGTTCTGAAGTCACGGAGAGCATCGCGAAAATCGTACCCTATTGGAACATTGTACAGGTGTCCTTCGGTTCCACGTCACCAGCTCTGAGTGATAGATCAGAATTTCCCCTCTTCTGCCGCACCGTCGCGCCTGATTCCTCACATAACCCCGCACGGATAGCTTTCATCAGACAATTCGGATGGGACACGGTGACGGCTTTCTCGCAGAACGAGGAGGTTTACTCGTTGGCTGTGAACGAGCTGGTCACGCAACTAGAAGCCGCCAATATCACCTGTGCCGCCTCCATCACCTTCGCGGAGTCGGACTTCAAGGAGCAACTGCAACAGTTAAAGGAACTAGATACAAGAATTATAATCGGAAGCTTTTCTCAGGAGATGATACCGAAAATATTTTGCGAGGCTTTCCGGTTGGGGATGTTTGGAGCGGAATATGCCTGGCTTGTTGCCGGCATGCCGCCTCGCATTAGAGGCACCGCGCCTTGCGCCAGGTCTCAGCTGGCCAGGGCCTTAGAAGGCCTCGTCACAGTCACAGCTTATAGAGGAATCGTGGGAGACGTGGCTTCATTCTCTGGGTTGACAAACCAAATGTTTCACCGTGAGATGGAAGCCGTAGGAGTACCAGTCGCTCCGTACGCCCCACAAACCTACGACGCAGTCTGGGTCATAGCACTAGCACTAAGCAGAGCTGAACAGCAATGGAGTCAGGGTATCAATGGAACGCCTACGAACAATAAACTGGCCCTTGACCATTTCGACTACGACCGGAAGGACATGGCCGAGGACTTCCTCAATCAGTTGGAGAGTTTGAGTTTTTTGGGTGTTTCTGGACCTGTATCGTTCAATGGCGCAGACAGAATCGGTACATCAGCGTTTTATCAAATTCAAGGTGGTCGTCCAAAAACCGTTGCATTATACACCCATGGCAGAGAAATCTCGTGTACTGACTGCGCCAAGCCACAATGGGCTGGTGGCATACCCGCGGCCAGACGGGTACTCGTTCTAAGGGTCGATTCCGTGTGGGCTCCCGCTAGACTGGCGGTGGCTACATTGGCAGCAGCTGGCGTGGCTCTTGCGCTGGCATTTCTGGTCTTTAATTTACACTACAGTAAAAGAAGATCAATAAAACTCTCATCTCCGAGACTGAACAACATGACTCTGATTGGTTGCGTGCTAGTATATACTGCTGTTGCGTTATTGGGCGTCGACAATGCCACTTTACCATCATACGTGCCCTTTTCTGCCATGTGTACTGGTAGAGTGTACATTCTGTCGGCTGGTTTTTCATTGGCTTTTGGTTCGATGTTTGCCAAAACGTACAGAGTTCATCGGATATTTGTAAGTAACAGAAGTGGTGTCTGCAAAACGAAGCTACTCCAAGATACGCCTCTCATATCCCTGGTCTGCGCTTTACTTGTGATCGACGGCATGATCGTCACTCTCTGGACCATCCTAGATCCAATGGAGAGACACCTGAAGAACTTGACGATTGAGATCAGCGCTAACGATAGAAGCGTGATTTATCAACCTCAGCTAGAAGTCTGCAAGTCTCAGAACACAACGGGCTGGCTTTGCGCTTTATACGCTTACAAGGGCCTCCTTCTCATAGTGGGGGTGTACATGGCTTGGGAGACCAGAAACGTTAAGATTTCTGCCCTAAACGACTCGAAATACATCGGAATCAGTGTTTATTCTGTTGTGATCACCAGCGCAAGTGTTGTTGTTATAGGAACCATAATTTCCGAAAGAGCCACTTTGGCTTACATCAGTATAACTAGTTTGATCCTTATTACAACGACATCAACGCTCTGTTTGCTGTTCTTGCCGAAAATTGTCGCAATTAGAAGGAATATTGAAGAAGACCCCGTCATACAAAGCATGGGCCTGAGGCTGGAGTGTAAAACCAGAAGGTTCGTTACGGACGAAACCCAAGAACTACATTTCAGGATAGAAATACAGAATAAAGTGTTCAGGAGAGAAGTGGCGGCGCTGGACAAAGAAATCGGAAGACTTGAGAAACTGCTATCAGAGCCGCTAGACTTCACTGGGTCAAACGCCTCGATATCCTTGCAGAGACGCTTGGAGCTCAACACAGTCGAAGAGGAAGGTAATCTACGTTACGACGATCGACGTACTCCAAGCATCGGCGGTGGCCTACCCATGCTCCTGCTGTCAGTTCTACCGCCAGTCATACCCCGAGCAAGCTGGCCCTCAGCCGAAGCCTATCGCGGCAGGAACTCCGTCAGTTTCAGCTCGCAACCTAAGCTCGACCAAAGGAAATCGCATCCAGCGATCGACTTATACAATTTGTGTCTCAATAAACGAGAACAGCCCGGCTTACTCAGAAGACTGAAAAGCTTCTTCGGCAGTAGACCTTCCAGTAGAAAGGCGTCTGCCATATCAATAGCCGACCCGACAAGTCAAAGCATCGCGGCAGCTTTGAAAATGCACGTCGGAATGATCGCAGGATTAGTTCCGGGAACCAGAAAGCACTCAATGGTGTTATCCTGCAACACGCTACACGTGCCGAACCCCGAGATGAAACTGAGAAGAGAGTCTTACGCGAAAAGCGGCCCTATCATTCGGGTAACCGATGACGAGCCGTCCTGCTCAAGTTACATTCCGGAGAACAGCGTACACATAGGGCCCCAGAAATATATTGCTGAGCACGAGACCAAAGTAAACTTTGTATTACCACCGACACATCAAAGACCAATGTCCCACCAGAGCTCGTATGAAAAAATCAAGGGCTCTCCAAGGTTTCCTCATAGGATAACTCCTACAGCTAGCAGCTTGACCAATAGTCTTCTAGATACAAGAAAAACCAGTGCCGGTAGCATTTTGAGCGTGTCTGGCAAGGCCTTTGATGAGCAGCGAAGGTTTAGTCATCAGAACGTCAGCCATCAAGAAGATAGAGGAAAGACCCTACTAGAAAGCAGATCGAAGTCTACAGAAGACGCAATGCCTGGGCCTTCGACGAGGAATGATTAA

Protein

MYEPNISNETNILNENFNDLTNNTNNEFSEDVHEFIGTVKLENITKDLITDFNATISESNESDIGDDLKAIEIGVLNIENKDNSMEKLRVDDVTRTKIFYDFSTTVNKKDDRNLITNETFTVKFNLDKNKTTEAKIRDLKNYPSGSFHPILNPPAQITDVNTSSSTFINELPRATTSRVVSILGLFELSVGDTPRVDGASELAAAKLAVEHVNKRNLLPGYKLHLITNDTKCDPGVGVDRFFHALYTERESRMVMLLGTACSEVTESIAKIVPYWNIVQVSFGSTSPALSDRSEFPLFCRTVAPDSSHNPARIAFIRQFGWDTVTAFSQNEEVYSLAVNELVTQLEAANITCAASITFAESDFKEQLQQLKELDTRIIIGSFSQEMIPKIFCEAFRLGMFGAEYAWLVAGMPPRIRGTAPCARSQLARALEGLVTVTAYRGIVGDVASFSGLTNQMFHREMEAVGVPVAPYAPQTYDAVWVIALALSRAEQQWSQGINGTPTNNKLALDHFDYDRKDMAEDFLNQLESLSFLGVSGPVSFNGADRIGTSAFYQIQGGRPKTVALYTHGREISCTDCAKPQWAGGIPAARRVLVLRVDSVWAPARLAVATLAAAGVALALAFLVFNLHYSKRRSIKLSSPRLNNMTLIGCVLVYTAVALLGVDNATLPSYVPFSAMCTGRVYILSAGFSLAFGSMFAKTYRVHRIFVSNRSGVCKTKLLQDTPLISLVCALLVIDGMIVTLWTILDPMERHLKNLTIEISANDRSVIYQPQLEVCKSQNTTGWLCALYAYKGLLLIVGVYMAWETRNVKISALNDSKYIGISVYSVVITSASVVVIGTIISERATLAYISITSLILITTTSTLCLLFLPKIVAIRRNIEEDPVIQSMGLRLECKTRRFVTDETQELHFRIEIQNKVFRREVAALDKEIGRLEKLLSEPLDFTGSNASISLQRRLELNTVEEEGNLRYDDRRTPSIGGGLPMLLLSVLPPVIPRASWPSAEAYRGRNSVSFSSQPKLDQRKSHPAIDLYNLCLNKREQPGLLRRLKSFFGSRPSSRKASAISIADPTSQSIAAALKMHVGMIAGLVPGTRKHSMVLSCNTLHVPNPEMKLRRESYAKSGPIIRVTDDEPSCSSYIPENSVHIGPQKYIAEHETKVNFVLPPTHQRPMSHQSSYEKIKGSPRFPHRITPTASSLTNSLLDTRKTSAGSILSVSGKAFDEQRRFSHQNVSHQEDRGKTLLESRSKSTEDAMPGPSTRND

Similarity

Belongs to the G-protein coupled receptor 3 family.

Uniprot

H9JLQ8   A0A2H1V0S0   A0A3S2LEA5   A0A194QTK8   A0A194PIT2   A0A336LRP5   + More
A0A067RF46   A0A154PTY8   B4JDS6   B4LTP6   A0A0C9QHY7   B4P2W6   B3MLQ9   B3N7T8   A0A0J9QTA5   A0A3B0JBL7   Q9BML5   B4KF86   Q9VPS7   Q29LM3   A0A3L8DVA8   B4ID07   A0A1W4UQ97   A0A088AN28   A0A2A3EI96   B4N0S2   A0A158NYX1   A0A195BUN8   A0A0L7RDY1   B4Q6J0   A0A1B0CFC1   A0A0M8ZYE3   A0A026WBP1   A0A151WQG7   A0A151J159   A0A182GGK9   A0A1J1I188   A0A182Y5U1   A0A182V1P6   A0A232F408   A0A182X7M6   A0A182F168   A0A1S4H1D5   Q171A7   A0A182IE41   W5JV31   A0A182TPY1   A0A084VPF7   A0A1S4J7W5   B0W5U1   A0A195FTL5   Q7PFP4   A0A195D0T9   A0A0N8NZ11   A0A182Q0P0   A0A182NEE9   A0A182P375   A0A182RGF3   A0A182VUZ2   A0A182KGY4   A0A182LUW1   B4GPQ7   A0A182JFC5   A0A2J7RC43   D2A100   T1HAH4  

Pubmed

19121390    26354079    24845553    17994087    17550304    22936249    + More
11168554    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    15632085    30249741    21347285    24508170    26483478    25244985    28648823    12364791    17510324    20920257    23761445    24438588    18362917    19820115   

EMBL

BABH01005228    BABH01005229    BABH01005230    BABH01005231    ODYU01000155    SOQ34445.1    + More
RSAL01000028    RVE51879.1    KQ461194    KPJ06881.1    KQ459603    KPI92958.1    UFQT01000134    SSX20630.1    KK852674    KDR18733.1    KQ435102    KZC14670.1    CH916368    EDW03446.1    CH940649    EDW65019.1    GBYB01014278    JAG84045.1    CM000157    EDW87173.1    CH902620    EDV30780.1    CH954177    EDV57264.1    CM002910    KMY87357.1    KMY87359.1    OUUW01000004    SPP79744.1    AF318274    AAK13422.1    CH933807    EDW13069.2    KRG03565.1    KRG03566.1    KRG03567.1    KRG03568.1    AE014134    AAF51465.2    AAN10484.2    AFH03503.1    AHN54069.1    CH379060    EAL34022.3    QOIP01000003    RLU24420.1    CH480829    EDW45433.1    KZ288245    PBC31194.1    CH963920    EDW77685.2    ADTU01004332    ADTU01004333    ADTU01004334    ADTU01004335    ADTU01004336    ADTU01004337    ADTU01004338    ADTU01004339    ADTU01004340    ADTU01004341    KQ976407    KYM91462.1    KQ414613    KOC69015.1    CM000361    EDX03256.1    AJWK01009929    AJWK01009930    AJWK01009931    AJWK01009932    AJWK01009933    AJWK01009934    KQ435824    KOX72109.1    KK107295    EZA53061.1    KQ982821    KYQ50152.1    KQ980571    KYN15529.1    JXUM01061926    KQ562175    KXJ76496.1    CVRI01000038    CRK94045.1    NNAY01000996    OXU25566.1    AAAB01008839    CH477460    EAT40585.2    APCN01004559    ADMH02000366    ETN66815.1    ATLV01015001    KE524999    KFB39851.1    DS231844    EDS35744.1    KQ981276    KYN43632.1    EAA45235.2    KQ977004    KYN06530.1    KPU73028.1    KPU73029.1    AXCN02000859    AXCM01002236    CH479187    EDW39579.1    NEVH01005887    PNF38414.1    KQ971338    EFA01604.1    ACPB03017385   

Proteomes

UP000005204    UP000283053    UP000053240    UP000053268    UP000027135    UP000076502    + More
UP000001070    UP000008792    UP000002282    UP000007801    UP000008711    UP000268350    UP000009192    UP000000803    UP000001819    UP000279307    UP000001292    UP000192221    UP000005203    UP000242457    UP000007798    UP000005205    UP000078540    UP000053825    UP000000304    UP000092461    UP000053105    UP000053097    UP000075809    UP000078492    UP000069940    UP000249989    UP000183832    UP000076408    UP000075903    UP000215335    UP000076407    UP000069272    UP000008820    UP000075840    UP000000673    UP000075902    UP000030765    UP000002320    UP000078541    UP000007062    UP000078542    UP000075886    UP000075884    UP000075885    UP000075900    UP000075920    UP000075881    UP000075883    UP000008744    UP000075880    UP000235965    UP000007266    UP000015103   

PRIDE

H9JLQ8    Q9BML5    Q9VPS7   

Pfam

PF00003   7tm_3        + More
PF01094   ANF_receptor

Interpro

IPR002455   GPCR3_GABA-B        + More
IPR028082   Peripla_BP_I       
IPR001828   ANF_lig-bd_rcpt       
IPR017978   GPCR_3_C       
IPR000337   GPCR_3       

SUPFAM

SSF53822   SSF53822       

ProteinModelPortal

H9JLQ8   A0A2H1V0S0   A0A3S2LEA5   A0A194QTK8   A0A194PIT2   A0A336LRP5   + More
A0A067RF46   A0A154PTY8   B4JDS6   B4LTP6   A0A0C9QHY7   B4P2W6   B3MLQ9   B3N7T8   A0A0J9QTA5   A0A3B0JBL7   Q9BML5   B4KF86   Q9VPS7   Q29LM3   A0A3L8DVA8   B4ID07   A0A1W4UQ97   A0A088AN28   A0A2A3EI96   B4N0S2   A0A158NYX1   A0A195BUN8   A0A0L7RDY1   B4Q6J0   A0A1B0CFC1   A0A0M8ZYE3   A0A026WBP1   A0A151WQG7   A0A151J159   A0A182GGK9   A0A1J1I188   A0A182Y5U1   A0A182V1P6   A0A232F408   A0A182X7M6   A0A182F168   A0A1S4H1D5   Q171A7   A0A182IE41   W5JV31   A0A182TPY1   A0A084VPF7   A0A1S4J7W5   B0W5U1   A0A195FTL5   Q7PFP4   A0A195D0T9   A0A0N8NZ11   A0A182Q0P0   A0A182NEE9   A0A182P375   A0A182RGF3   A0A182VUZ2   A0A182KGY4   A0A182LUW1   B4GPQ7   A0A182JFC5   A0A2J7RC43   D2A100   T1HAH4  

PDB

4MS4     E-value=8.13954e-50,     Score=502

KEGG

101738582    K04615 gamma-aminobutyric acid type B receptor | (RefSeq) gamma-aminobutyric acid type B receptor su

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0004965   GO:0004930   GO:0030431   GO:0007186   GO:0007214   GO:0038039   GO:0030286   GO:0005515   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

PANTHER

PTHR10519  

Length:

1255

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

169.27548

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00038

outside

1  -  605

TMhelix

606  -  628

inside

629  -  640

TMhelix

641  -  660

outside

661  -  679

TMhelix

680  -  702

inside

703  -  721

TMhelix

722  -  744

outside

745  -  778

TMhelix

779  -  801

inside

802  -  817

TMhelix

818  -  840

outside

841  -  844

TMhelix

845  -  867

inside

868  -  1255

 

 

Pi

25.832165

Theta

213.453592

Tajima's D

-1.508289

CLR

0.635174

CSRT

0.0590970451477426

Interpretation

Uncertain