Gene

KWMTBOMO07021

Pre Gene Modal

BGIBMGA010508

Annotation

PREDICTED:_probable_methyltransferase_TARBP1_[Bombyx_mori]

Location

Bomo_Chr12(+):1984200-1990016      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.982

CDS

ATGCTGAAAACTAAGATAATAGAATATGGACCAGCGAGAAATATTTCACTATATTTTCTGACAAGGCAGTTGAATAAAAAAGAAATTTTAACATCAGAACTAGTGTATGTTATATGTGAAATTCTGCTATACAATCCTGTACTTAAAAAGGATCAGAGGACTATAGAAAATATTGAAATTGATATTAAGAATAATGGAAAATTTAAATTGAAAGATAAAAGCTTCCGCAATCATCACAACTACGAAATACAGTACCTGGCGTTGTCTACTCTAAGTAAAATAAATGACTTGGAAACGCTAAAAATAATTATCAACATTTTCATGAATAAAATGAATGAAGTGTTCAAGAATAAAGTCAGATATCACGGCAATTCTCAGACGCACAGGCTCATCGCGACGGCTCTACAGAATACACTGTTCATTGCGTTGTTAGATTCGAGAACAATCGACGATGGCGCAATGGATTGGTGTTTGAAACTATTAGGAAAATTACCTCATCAAGCCAGTGTTAAAATCTATCTTGAATGGCATATTTCTTTATGTTTGTATTTGAAGAAAATTATTCTCAATGAGGACTTACAAAAACTCCTTGGCTCGTACAATATCCCAATATCATCACAGTTCATGATATTGTACTGGTTAATGAAACGCAAATTGTCGACAAAACGATTCGTTAACGACGAATATGATTTTGTGATGGACACTTTGCTGTCGCACACTATGGGACAGATGTTCAACACCAGACTCCACGCTCAATATCTAGCCGCAGACTTGTATCGGCGTAACGAGATTCACGCAGCCAAATACGAATACACAATTCGAGTCATAGAAAAAACGTTTGCCGAAAGTAAAAGAGACAAGAACTTTCTGAAACTGAAAAACGATTATTTTGTTAATAATTTCGATATAATCAATAATCTAACACCGTATTTCATTTATGAATGTTCATCGAAATTATCTGACGCTACTCTCAATGAGGTAAAAGATTTGGAAACAGTAAAACATCAATTGAATGTTATTAATGAAAATATAAAAATAGATATGGGTGACGATTTGAAAACTGAGTGGCTACGGGGACATGCGTCTGACGAAGAATTTGAAGAATACGAACGTATTTGTGTGTTAAATCAAAGGGAAGACTACAGTAAGGAATGTGTGGGAACAATACAGAAGAAATATATACCGTGGAAGAATATGAGTGATGTTAACTCGTATGATCACAGCAAAAAGTATTGA

Protein

MLKTKIIEYGPARNISLYFLTRQLNKKEILTSELVYVICEILLYNPVLKKDQRTIENIEIDIKNNGKFKLKDKSFRNHHNYEIQYLALSTLSKINDLETLKIIINIFMNKMNEVFKNKVRYHGNSQTHRLIATALQNTLFIALLDSRTIDDGAMDWCLKLLGKLPHQASVKIYLEWHISLCLYLKKIILNEDLQKLLGSYNIPISSQFMILYWLMKRKLSTKRFVNDEYDFVMDTLLSHTMGQMFNTRLHAQYLAADLYRRNEIHAAKYEYTIRVIEKTFAESKRDKNFLKLKNDYFVNNFDIINNLTPYFIYECSSKLSDATLNEVKDLETVKHQLNVINENIKIDMGDDLKTEWLRGHASDEEFEEYERICVLNQREDYSKECVGTIQKKYIPWKNMSDVNSYDHSKKY

Uniprot

A0A2W1B6J2   A0A2A4K8N7   A0A2H1W2V7   A0A212EII6   A0A1S3DAS3   L7MGU6   + More
L7MGL0   A0A1B6IZ52   A0A131YUS7   A0A1B6LX73   A0A1B6CIL5   H3C2M8   A0A147BM09   H3DGP4   Q4RQ83   F6ULL7   A0A0P4VNN4   W5NH85   W5NH82   A0A147BCS0   U3KGK4   U3KGK6   A0A3L7I1C3   A0A091S828   A0A2R5L604   A0A2J7R4Y8   A0A2I4BC51   A0A2I4BCB6   A0A3P9BC93   K1P8Q1   A0A1L8G8H3   A0A2Y9LCX1   A0A2Y9L6X4   A0A2Y9L1V9   A0A315VS85  

Pubmed

28756777    22118469    25576852    26830274    15496914    29652888    + More
20431018    27129103    29704459    25186727    22992520    27762356    29703783   

EMBL

KZ150274    PZC71659.1    NWSH01000039    PCG80366.1    ODYU01005904    SOQ47276.1    + More
AGBW02014643    OWR41281.1    GACK01002625    JAA62409.1    GACK01002626    JAA62408.1    GECU01015514    JAS92192.1    GEDV01006265    JAP82292.1    GEBQ01011743    JAT28234.1    GEDC01024048    GEDC01020462    JAS13250.1    JAS16836.1    GEGO01003574    JAR91830.1    CAAE01015006    CAG09449.1    AAMC01050656    AAMC01050657    AAMC01050658    AAMC01050659    AAMC01050660    AAMC01050661    AAMC01050662    AAMC01050663    AAMC01050664    AAMC01050665    GDKW01003900    JAI52695.1    AHAT01001667    GEGO01006850    JAR88554.1    AGTO01020278    RAZU01000110    RLQ71933.1    KK716360    KFQ36630.1    GGLE01000783    MBY04909.1    NEVH01007399    PNF35897.1    JH817871    EKC20062.1    CM004474    OCT80105.1    NHOQ01001229    PWA26081.1   

Proteomes

UP000218220    UP000007151    UP000079169    UP000007303    UP000008143    UP000018468    + More
UP000016665    UP000273346    UP000235965    UP000192220    UP000265160    UP000005408    UP000186698    UP000248482   

PRIDE

L7MGU6    L7MGL0   

Pfam

PF00588   SpoU_methylase

Interpro

IPR029028   Alpha/beta_knot_MTases        + More
IPR001537   SpoU_MeTrfase       
IPR029026   tRNA_m1G_MTases_N       
IPR016024   ARM-type_fold       
IPR025806   Prob_MeTrfase_TARBP1       

SUPFAM

SSF75217   SSF75217        + More
SSF48371   SSF48371       

Gene 3D

3.40.1280.10    

ProteinModelPortal

A0A2W1B6J2   A0A2A4K8N7   A0A2H1W2V7   A0A212EII6   A0A1S3DAS3   L7MGU6   + More
L7MGL0   A0A1B6IZ52   A0A131YUS7   A0A1B6LX73   A0A1B6CIL5   H3C2M8   A0A147BM09   H3DGP4   Q4RQ83   F6ULL7   A0A0P4VNN4   W5NH85   W5NH82   A0A147BCS0   U3KGK4   U3KGK6   A0A3L7I1C3   A0A091S828   A0A2R5L604   A0A2J7R4Y8   A0A2I4BC51   A0A2I4BCB6   A0A3P9BC93   K1P8Q1   A0A1L8G8H3   A0A2Y9LCX1   A0A2Y9L6X4   A0A2Y9L1V9   A0A315VS85  

KEGG

101738311    K15333 tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34] | (RefSeq) probable methyltransferase TAR

GO

GO:0008173   GO:0006396   GO:0003723   GO:0030488   GO:0016423  

Length:

411

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.71536

Exp number, first 60 AAs:

0.39646

Total prob of N-in:

0.07392

outside

1  -  411

 

 

Pi

155.367643

Theta

147.640238

Tajima's D

-1.186079

CLR

402.289679

CSRT

0.104744762761862

Interpretation

Uncertain