SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07019  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010464
Annotation
PREDICTED:_probable_DNA-directed_RNA_polymerase_subunit_delta_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 3.193
 

Sequence

CDS
ATGAGCACCAATGAAAATAACAGTGAAGTGGCCGTTGACAAGGTCGGCGATGAGAATAAAGGTGACGCCAAAAGTGAACTAAAAGGAGCGAAAAGGGCAGCAGAGGAAAAAACGACAGAGGCGAAAAAGGCGCGAAAGGAAGAAAACGGAGGAGGTGACGAAGACGACGAACACAGTGATGATGAAGACGTCGACGGGCTTTTTGAGGGAGAGGAGGATGACGACGATGAAGAAGTAGTGGAAGGTGAAGAAGATGATGAGGAGTTAGGAGAAGAAGAGGATGAAGATATCGAAGGCGAAGGTGAAGAAGAATTAATTGCAGAGGAGGAAGAAGACGATGCGTAA
Protein
MSTNENNSEVAVDKVGDENKGDAKSELKGAKRAAEEKTTEAKKARKEENGGGDEDDEHSDDEDVDGLFEGEEDDDDEEVVEGEEDDEELGEEEDEDIEGEGEEELIAEEEEDDA

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
114
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.36005
outside
1  -  114
 
 

Population Genetic Test Statistics

Pi
49.862054
Theta
69.482067
Tajima's D
-1.09536
CLR
0.818165
CSRT
0.12144392780361
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 IEEISISK 100.00 7e-09
26280517 SSSSSYVVEIVDGK 100.00 7e-09
28467696 STNENNSEVAVDK 100.00 7e-09
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