Gene

KWMTBOMO07017

Pre Gene Modal

BGIBMGA010466

Annotation

PREDICTED:_neutral_ceramidase-like_[Papilio_machaon]

Location

Bomo_Chr12(-):1900155-1906623      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 1.326

CDS

ATGGCATTATCTTTTGTGGGAAATGTCGTGATTACCGTGATCGTATTGGGCGTAATCAGTGGCACGAGTGCTACTTTCACTTTTAAAACCAAGGACAATATTGATAATCATGAAGATGATCAGTCTAAGCAGTTTCCGAGGCCAGAGCCAGAGGCGGCTTCGTCTTACGAAGTCGGCGTTGGTATTGCAGATATGACCGGACCCTGTGTTGAAATAACATTTATGGGTTACGCTGAGCTCGGACAGTCTGGCGAAGGTATACATTTGAGGCAGTTTTCCAGAGCCTTCATATTTTCGAAGGGGAATACCAGAGTGGTACTAGTCACAGCTGAAGTGCAGGCAGTAGGCATTGCCGTCAGGAGACAGGTGGTGAAGAATTTGCAAGAGCGTTACGGTGACATGTACAGCCTCCGCAACGTGATAATCACTGGAACGCACACGCACAGCACCCCTGGTGGATATCTGGTGGATTTCATTCTGGACGTTAGCATATTAGGATTCTCTAAGGAGACTTTCAATGCCTACGTTGACGGAATTACTAGGAGCATAGTCCGCGCCCATGAAAACATGGTACCAGCGCGTTTGGTGTTCGCTCAGACGAAAGTAAAGAACGCCCACAAGAACCGATCTCCCTACTCCTATAATAACAATCCTGCTGAGGAACGAGCTAGCCCACCTGGTGTTAAGAGGTAA

Protein

MALSFVGNVVITVIVLGVISGTSATFTFKTKDNIDNHEDDQSKQFPRPEPEAASSYEVGVGIADMTGPCVEITFMGYAELGQSGEGIHLRQFSRAFIFSKGNTRVVLVTAEVQAVGIAVRRQVVKNLQERYGDMYSLRNVIITGTHTHSTPGGYLVDFILDVSILGFSKETFNAYVDGITRSIVRAHENMVPARLVFAQTKVKNAHKNRSPYSYNNNPAEERASPPGVKR

Uniprot

H9JLR4   A0A2A4K9P2   A0A1E1VZH0   A0A2W1BEQ2   A0A2H1VBN7   A0A3S2LIR5   + More
A0A194QND7   A0A194PJR3   A0A0L7LV17   A0A212EIG5   V5GRC4   A0A194QTJ8   A0A1E1WP24   A0A194PI22   A0A2H1VZ93   A0A182G996   A0A2W1B8Z5   A0A2H1VYE1   V5GV97   A0A2A4K9C0   A0A087ZNN1   Q173S2   A0A1S4FFJ2   Q173S3   A0A0L7RCF7   A0A084VN16   B0XLL1   A0A182QIH4   A0A1Q3FFP1   W5JJX8   A0A182RL44   A0A0J7KWV6   A0A182Y541   A0A182LIT5   A0A1Q3FFN4   A0A182MJ71   A0A182W445   A0A182PPX0   Q7QI06   A0A182JG20   A0A2P8Y9J9   A0A1B0CQR1   A0A182IDP2   A0A182US50   D6X3Y5   A0A182XNH7   E2ADY5   A0A182U547   A0A2K8JRS6   A0A2M4ATB9   A0A1L8DPV5   B0WGE6   A0A023F618   A0A224XFS4   A0A146ME47   A0A0A9W5T8   A0A182MZX1   A0A1Q3FNN9   A0A1L8DQ15   A0A1Q3FNI5   A0A1Q3FNM7   A0A1Q3FNZ9   A0A182FIG3   A0A336ML87   R4N4U2   N6TBZ0   D6X3Y4   N6U9H2   U4TTS5   A0A232F654   A0A0M8ZWP9   A0A195BAE0   A0A182PKG1   T1HX07   A0A154P9R8   K7ITX7   A0A2M4BFF7   F4X8U0   A0A034V4F0   A0A2M4ACS0   A0A2M4ACS3   A0A0P4VKF0   T1PE63   A0A1I8PNB8   A0A2M4BF47   A0A195DRJ6   E9IRA3   A0A182I907   A0A2M4ADN9   A0A151I6X0   A0A182UYT8   A0A182LAZ3   A0A182U2Y6   A0A182WVC6   A0A2M4BF41   A0A0K8USE8   A0A195FCN6   A0A0L0BLG6   Q7QG18  

Pubmed

19121390    28756777    26354079    26227816    22118469    26483478    + More
17510324    24438588    20920257    23761445    25244985    20966253    12364791    14747013    17210077    29403074    18362917    19820115    20798317    25474469    26823975    25401762    23601004    23537049    28648823    20075255    21719571    25348373    27129103    25315136    21282665    26108605   

EMBL

BABH01005206    BABH01005207    BABH01005208    NWSH01000039    PCG80382.1    GDQN01010918    + More
JAT80136.1    KZ150341    PZC71310.1    ODYU01001690    SOQ38260.1    RSAL01000003    RVE54728.1    KQ461194    KPJ06869.1    KQ459603    KPI92969.1    JTDY01000041    KOB79229.1    AGBW02014643    OWR41276.1    GALX01004309    JAB64157.1    KPJ06871.1    GDQN01002261    JAT88793.1    KPI92967.1    ODYU01005219    SOQ45862.1    JXUM01049339    KQ561600    KXJ78038.1    PZC71311.1    ODYU01005218    SOQ45860.1    GALX01004308    JAB64158.1    PCG80383.1    CH477417    EAT41313.1    EAT41312.1    KQ414616    KOC68485.1    ATLV01014673    KE524978    KFB39360.1    DS234534    EDS34360.1    AXCN02002023    GFDL01008667    JAV26378.1    ADMH02000912    ETN64687.1    LBMM01002475    KMQ94783.1    GFDL01008699    JAV26346.1    AXCM01006278    AAAB01008811    EAA04917.3    PYGN01000778    PSN40922.1    AJWK01023885    AJWK01023886    AJWK01023887    APCN01004753    KQ971379    EEZ97352.2    GL438827    EFN68218.1    KY030989    ATU82740.1    GGFK01010693    MBW44014.1    GFDF01005592    JAV08492.1    DS231926    EDS26943.1    GBBI01002065    JAC16647.1    GFTR01007768    JAW08658.1    GDHC01001347    JAQ17282.1    GBHO01040465    GBRD01013004    GBRD01013003    JAG03139.1    JAG52822.1    GFDL01005826    JAV29219.1    GFDF01005593    JAV08491.1    GFDL01005885    JAV29160.1    GFDL01005878    JAV29167.1    GFDL01005839    JAV29206.1    UFQT01001467    SSX30700.1    JX569799    AGL39308.1    APGK01043745    APGK01043746    APGK01043747    APGK01043748    APGK01043749    APGK01043750    APGK01043751    APGK01043752    APGK01043753    KB741017    ENN75248.1    EEZ97353.1    ENN75247.1    KB631644    ERL84934.1    NNAY01000885    OXU26062.1    KQ435847    KOX71109.1    KQ976540    KYM81192.1    ACPB03025916    KQ434839    KZC07968.1    GGFJ01002644    MBW51785.1    GL888932    EGI57359.1    GAKP01021563    JAC37389.1    GGFK01005263    MBW38584.1    GGFK01005262    MBW38583.1    GDKW01001794    JAI54801.1    KA646243    AFP60872.1    GGFJ01002534    MBW51675.1    KQ980581    KYN15461.1    GL765107    EFZ16859.1    APCN01003147    GGFK01005584    MBW38905.1    KQ978455    KYM93916.1    GGFJ01002535    MBW51676.1    GDHF01022808    GDHF01014766    GDHF01001327    JAI29506.1    JAI37548.1    JAI50987.1    KQ981673    KYN38173.1    JRES01001702    KNC20803.1    AAAB01008844    EAA05985.5   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000037510    + More
UP000007151    UP000069940    UP000249989    UP000005203    UP000008820    UP000053825    UP000030765    UP000002320    UP000075886    UP000000673    UP000075900    UP000036403    UP000076408    UP000075882    UP000075883    UP000075920    UP000075885    UP000007062    UP000075880    UP000245037    UP000092461    UP000075840    UP000075903    UP000007266    UP000076407    UP000000311    UP000075902    UP000075884    UP000069272    UP000019118    UP000030742    UP000215335    UP000053105    UP000078540    UP000015103    UP000076502    UP000002358    UP000007755    UP000095301    UP000095300    UP000078492    UP000078542    UP000078541    UP000037069   

PRIDE

H9JLR4   

Pfam

PF17048   Ceramidse_alk_C        + More
PF04734   Ceramidase_alk

Interpro

IPR031329   NEUT/ALK_ceramidase_N        + More
IPR038445   NCDase_C_sf       
IPR006823   Ceramidase_alk       
IPR031331   NEUT/ALK_ceramidase_C       

Gene 3D

2.60.40.2300    

ProteinModelPortal

H9JLR4   A0A2A4K9P2   A0A1E1VZH0   A0A2W1BEQ2   A0A2H1VBN7   A0A3S2LIR5   + More
A0A194QND7   A0A194PJR3   A0A0L7LV17   A0A212EIG5   V5GRC4   A0A194QTJ8   A0A1E1WP24   A0A194PI22   A0A2H1VZ93   A0A182G996   A0A2W1B8Z5   A0A2H1VYE1   V5GV97   A0A2A4K9C0   A0A087ZNN1   Q173S2   A0A1S4FFJ2   Q173S3   A0A0L7RCF7   A0A084VN16   B0XLL1   A0A182QIH4   A0A1Q3FFP1   W5JJX8   A0A182RL44   A0A0J7KWV6   A0A182Y541   A0A182LIT5   A0A1Q3FFN4   A0A182MJ71   A0A182W445   A0A182PPX0   Q7QI06   A0A182JG20   A0A2P8Y9J9   A0A1B0CQR1   A0A182IDP2   A0A182US50   D6X3Y5   A0A182XNH7   E2ADY5   A0A182U547   A0A2K8JRS6   A0A2M4ATB9   A0A1L8DPV5   B0WGE6   A0A023F618   A0A224XFS4   A0A146ME47   A0A0A9W5T8   A0A182MZX1   A0A1Q3FNN9   A0A1L8DQ15   A0A1Q3FNI5   A0A1Q3FNM7   A0A1Q3FNZ9   A0A182FIG3   A0A336ML87   R4N4U2   N6TBZ0   D6X3Y4   N6U9H2   U4TTS5   A0A232F654   A0A0M8ZWP9   A0A195BAE0   A0A182PKG1   T1HX07   A0A154P9R8   K7ITX7   A0A2M4BFF7   F4X8U0   A0A034V4F0   A0A2M4ACS0   A0A2M4ACS3   A0A0P4VKF0   T1PE63   A0A1I8PNB8   A0A2M4BF47   A0A195DRJ6   E9IRA3   A0A182I907   A0A2M4ADN9   A0A151I6X0   A0A182UYT8   A0A182LAZ3   A0A182U2Y6   A0A182WVC6   A0A2M4BF41   A0A0K8USE8   A0A195FCN6   A0A0L0BLG6   Q7QG18  

PDB

4WGK     E-value=5.14812e-35,     Score=367

KEGG

101744377    K12349 neutral ceramidase [EC:3.5.1.23] | (RefSeq) neutral ceramidase-like

PATHWAY

00600    Sphingolipid metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0017040   GO:0046514   GO:0046512   GO:0005576   GO:0042759  

PANTHER

PTHR12670  

SignalP

Position:   1 - 24,         Likelihood:  0.680466

 

 

Length:

230

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.2768

Exp number, first 60 AAs:

21.92079

Total prob of N-in:

0.68667

POSSIBLE N-term signal

sequence

inside

1  -  4

TMhelix

5  -  27

outside

28  -  230

 

 

Pi

293.014068

Theta

39.027322

Tajima's D

1.869836

CLR

0.319551

CSRT

0.859457027148643

Interpretation

Uncertain