SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07014  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA010506
Annotation
hypothetical_protein_N300_14849?_partial_[Calypte_anna]
Location in the cell
Nuclear   Reliability : 2.526
 

Sequence

CDS
ATGAAGCAAGTCACAACGGTTGCGTTCGGCATTATCCTGCTGATTGTAAGCATTGGCGTTCAAGATGCCAGATCCGTCAGCTTACACAGAAGGTCCTTGAAAGATACGGAAGGTTTGAGCAAAGGCTTGGGAGCGGTTGACAGGCAAGTTGAAAAAAACGAAGATGACGGCTCGCAGCTGCGTCAAAAAGTCTACATCATCAAACTCAGCGAGAAAAAGGGCAAGCAGGATGTGGGCAAAGGATTAGGAGTCGTTGAGAAGGCTTCTGAGAGCGACAAGGACTCGTCGCTGCGTACACGCTTCATCAAACGTGGTGGAAAGGACGTTTCCAAACGTGACCTAGCTGGCACGGTATTAGATAGCGCTCCAAGCTACGGTGCAATAAGTCATTATAAAAACCGACATGATCTTTTTCGTGGTGTTCCAAAACCGGAAGACGAGAGCGTAGCAAATCGTAATATTCACGGTCAGAACACGGTATTAGATAGCGCTCCAAGCTACAGTGCAGCAAATCGTAATATTCACGATCACAACACGGTATTAGATAGCGCTCCAAGCTACAGTGCAGCAAATCGTAATATTCAGGATCACAACACGGTATTAGATAGCGCTCCAAGCTACAGTGCAGCAAATCGTGGTATTTACCTACGAGATGAATTTCGTGGTGTTCCAAAGCCGGAAGATGAGAACGTAGCAAATCGTAATATTCACGGTCAGAACACTGTATTAGATAGCGCTCCAAGCTACAGTGCAGCAAATCGTAATATTCACGGTCAGAACACGGTATTAGATAGCGCTCCAAGCTACAGTGCAGGAGGTCGTACTATTTACCTACGAGATGAATTTCGTGGTGTTCCAAAGCCGGAAGATGTGAACGTAGTATAA
Protein
MKQVTTVAFGIILLIVSIGVQDARSVSLHRRSLKDTEGLSKGLGAVDRQVEKNEDDGSQLRQKVYIIKLSEKKGKQDVGKGLGVVEKASESDKDSSLRTRFIKRGGKDVSKRDLAGTVLDSAPSYGAISHYKNRHDLFRGVPKPEDESVANRNIHGQNTVLDSAPSYSAANRNIHDHNTVLDSAPSYSAANRNIQDHNTVLDSAPSYSAANRGIYLRDEFRGVPKPEDENVANRNIHGQNTVLDSAPSYSAANRNIHGQNTVLDSAPSYSAGGRTIYLRDEFRGVPKPEDVNVV

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 25,         Likelihood:  0.861355
 
 
Length:
294
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
13.84585
Exp number, first 60 AAs:
13.84346
Total prob of N-in:
0.60087
POSSIBLE N-term signal
sequence
outside
1  -  294
 
 

Population Genetic Test Statistics

Pi
57.618373
Theta
85.299727
Tajima's D
-1.236675
CLR
176.984524
CSRT
0.0946952652367382
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
24093152 GVGYAIADNFIK 100.00 0.010
24402669 GVNTFSPEGR 100.00 0.010
24093152 GVPKPEDENVANR 100.00 0.013
24402669 GVPKPEDENVANR 100.00 0.013
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