Gene

KWMTBOMO07009  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA010472

Annotation

PREDICTED:_nesprin-1-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr12(-):1611446-1636363      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.845 Nuclear   Reliability : 1.848

CDS

ATGTCACTTCAAGAGGCATGCTTGGAACAAGAAGCCAGGGTAGCTGAACTCCGATCATTGGCGGCGAGAGTCGCTGCAGAAACTGGATCTAGGGCTCTCCAGGCCGACGCTGACGCACTGGCCCGAAGGCTGCAGCTGGTCGCCGGCGCTGTCCAGGTCCTGGCGGATCTGGGCGAAGCCCGGCAGAGCGCACGAGCTAAAGCGCAGCACGCCAAAGAGAAACTATGTGACATGAGACAGGACTTGGCTCCGCTGCACGAAGACGGAGAAATCGTTGAAGACAAACTGATAGCGTTACGAGAAAACCTTATCGCGCTGGGTAAGAGTGAAGCGGACATCGCTCCAGCCACGGCGGAACTGCCCGACATCGATAGAGACGTTTCCGAAGAACATTCGATCGTTAGGATCTTGGAACTATGGCAGGCTATGTTCAGAGACACATTCTTGCATTACCACAGGCTATCGACCGCCCTGGTTAGGTCTGGTGATGCGGCCACTGCGCTCAGACTATGGCACGAGTACTTGATCGACTTACAGTCGTTCTTGTCAAGCGGAGTTCCAACAGATTACGAAAACCTAACAGAGCACAAACGTCTGTGCAGGGTTCACAGAAATCTACTCACTTCGCAACGCTCAGTCCTAATAAACGAAAACAGGGATACTAAGAATAAGGACTTGGCCGACAAATTCGACACCCTTACTAATCTCCACAATGAAACCCTAGCGAGAATTGTCGAAAGACACGATGAAGTGTGCGCCCGCATCGGAGCCTGGGACGACTATAGAGAGAATTACACAGAACTATTGAGATGGCTTAAAGAAATGGAACGCGAAAAAGAAAAGCTGCAACTCAGATACGTTCACATGAAGAGGATACACAAGATCTTATCCAAAATACAGAATCTCGCTGACAAAGTGCCCGAAGGCCGCAAACAGTCTGATAAACTTCTAGTCAATCTCAAGAAAGTCTTACAGTTTACTGAGGAAGCTTATGGAGCCTCCGTCAAAATGGAATACGCCGGGAGTGTGAAGAGAGTCGAGAATCTGCAAGCTAGCCTCGACACATGGAGAGACTTCTTAACTCGAATTCTAGGCCTGATCGGTGAATACGAACGCTTGACAAGTGATTTACACAAAATGTACTCAAAGACACAAGACGACATTAGTTCATATACTGACGAGGAGAAATTATCTCGACCGCAACTCAAAAAAATTATTGATAAATATACAGATTTACGGACAAAGATCGAAAAGAGCGAAACGCAGATTGAGGCTTTGAGCGTCATCCAGGAACAGTTGAAAGAATGCCTGAGTCCGCAGGATATGAGAATAGTGAACCAAAGAATATGGCAACTGAGGCAACAACGCGCTGACCTTGAACATCAACTATCTATCATCATTCACAGACTTCAAGAACGACTGGAAATTTACGCCATATTTGATACGCGATTCAAACGATTCACGGAATGGATTACAACTGTCGAAACGCGTTTAGAGACTTCGGGCAGTAGCAGTAGCGACATCACCGCTTTAGATCCCCACGATTTGATCAGAAGGCTAAACGCTGATGTTCAAGCAGAAACTGCTATGAAGGAACGTGAATTTGAATGGCTCTCTGAAACCGGTAGCTCTCTTATAGAGGTAGCAAAGAAAGAGGAAAAGTCATATAGCAAAAACACGTCAAAACAGTTGAAGGACATGGAAGAAAGATGGCGAAAACTCCAGGAAACTGGTAGATCTAGAATTGTGAAAATTACTGAATTACTAGAAACTATAACACAGCTCGAAGAGAGGCTTACAGAAATCAGAATAAAACTACACGTCATAGAGTCGAAATTGACAACGACTGTTATCTTAGAATACCTAACGACAAAGAGCGTGGATGAGAAATTCAAAGAACGAGACGATACACATAAAGAAATTGAAGCCGAAAGTGGAGAGGTGTGTGAAACTTTGAATCTCTGCGATCTTGTGTTCAACGACCCCGATGTTCTCAAAGGTAACTTCGATCTCAGAAACTTAAGAACCGGAGTGGACATCGTCGAAAAGAAATGGAAAAATATTTGCGACACTTCTGAACATCGCAAGAATACGCTGAAAGAAATTCGTAAATCTGCCGAACTATCTTCGTCTGTTCTACCTAAATTCGTCAAGAAACTCGATTCAATCGAGAAGAGAGTTGAGAAAATTGAAACCCGAAAACAACGTGGTGAACATGAAGATGAAACGGTTTCGAAGGCCGTAATTAAAGACTTGGAAGCATTAGAACCCAACCTCAAGCGGATAGAGGACGCATACAGCCGCGTAGCGTCTGCAAGAGGCGTAGAGCTTCGTGGCCAAGGGGCAGACGAAGCTGCCAAGATGCGGTCGGCGATCCGTCGCTGGCAACAGCTCAGGGGCAGGGTAGACGCCGCTGGCGCAGACGTCCACAGACAGTTCGTGGCGGCACACGGAAAAGCAGTCGTCGCGTTGGCCGAAGTCGACGTCAGACTGACCAGAGCTCTGCATCTTGCTCCCACTCCCTTGGACAAAGAGGCCACCTTAAAAGAGCTAGAGTTGGTTGAAAAAGAACTGGCTGAATGTCAAGCATTAGTGGATGACGCCGATCGCTTGGCTGCTAAAGTCTCGACAGCGCAAGGCGTTTCTGAAATGGTCGCAGAGTACCGCGCCTTATATGCGGATGTCAGGTTGCGACTGGACCTGGCCAGAGCAGAGGTCGTCGGCGACGTGGACACCGCCGTTCAAGTTGACACTTTAAAATGGGAGACGGACGCAGCCCTACAAGTAGACACCCTCACCTCGAAGGAGACGTACCGAGCTGAACTGGCGTCGGCCGTGAGGGACACCTCGGAGGCGCTCGAAGTGCTGGAACTCGCGTTGCAGCAGCAGCTCAAAGACAACGCTGGAAGCGACGAACTGGCCGCGGCCGCAAAAGAAATCGCCAAAGCCGGAGCCAAGCCCGGACAGACCTTAGAGCTGGCCAAGCACCTCTCGGAGCTGCTGCTGACCGAGTGCGACGCGACTGAGGACGAAGCCATGATGAAGGAAGTTGAGTCTCTCTCGTTGCGGTACGAAGACCTGTTGACGCAAGCCAAGAAGAGGGAGCTCCAAATCAACAACCTGAGCGAGTCTGGTAGGCTGACCTGCCCACTGTGCTCGGAGAGGAACTGGAAACAGCTGGACAATGACCTTTGGCGGCTGGAGCAGTGGCTGCAGTTCGCCGAAGCCACGGAAGCTTCCAGAACCGAGCCGCCCGAACAATACGACTTACTCGAAGACGCTATACAGGACCACCGCGAGTTCCTGCTGGACCTGGACTCGCACAAGTCGATCGTGGTGTCGTTGAACGTGGTCGGCGGGCACGTGGCGGCGCATGCGCACGACGCTCGTGACGCGGCGCGCGTGCGGGCCCGCCTGGCCGCCGCCAACGCGCGCTGGGACCGCGCATGCGCACTCGCCGCCGACCGACAGAAGCTGCTGCAGCACGCGCTCGTGCACAACAGACAGTTCCACGATATCGTGGTCGAGTTAGTGGCGCAGCTGGCAGCGGCAGAACGCGGCGTGCGCGGCAGAGAGCCGCTGCGCTTGTCGCGTCCGGCGGACGAGCTGCAGCGCGACTTCAGACGCTTCAGTGAGCTGCGCGACGAGCTGCAGCGCGCCGAGCCGCGGGTGCACGCGCTGCACGACGCCGCACAGTTGCTGCGGACCGAGGACGCTCCCCCGCACTCGGACGACATCTGCCGCAGGCTAGCGGAACTCCGGCTGCGCCTGCAGTCCCTGCGCAAGTTGTCCGGTGTGTACGCGCTGAAGCTCGGCGCGGCACTGGCCCGGCGGCCCGCGCGCCCCGCCCCCGCCCCCGCCTCCGCCGCGCTCGCCGCCGCCGCCCTCGCCGCCGCGCCACAGCTAATGGAAGAGGAAGACGAGGAACTATCCACCATGACCCTGCCTCCGTTCGACGAGAATGAGGCGGAAGCCGATGAGCCGGCGAGCGAGGAGGAGACGCTGAGTGGCATGCAGCGCGGGCTGCGCTTCGTGTGCCGCGTGGCGCGTGCCTCCTTGCCCTTCCAAGCGCTCTTGCTGCTCGTGCTGGGCGCCGCCGCGCTGGCCCCGCACGCGCGCACCGAGTGCCGGGGCGGACTCGACCCCGTACTGCCCGTGCTGCGATACCCGCACGGGCCACCGCCGCTCTGA

Protein

MSLQEACLEQEARVAELRSLAARVAAETGSRALQADADALARRLQLVAGAVQVLADLGEARQSARAKAQHAKEKLCDMRQDLAPLHEDGEIVEDKLIALRENLIALGKSEADIAPATAELPDIDRDVSEEHSIVRILELWQAMFRDTFLHYHRLSTALVRSGDAATALRLWHEYLIDLQSFLSSGVPTDYENLTEHKRLCRVHRNLLTSQRSVLINENRDTKNKDLADKFDTLTNLHNETLARIVERHDEVCARIGAWDDYRENYTELLRWLKEMEREKEKLQLRYVHMKRIHKILSKIQNLADKVPEGRKQSDKLLVNLKKVLQFTEEAYGASVKMEYAGSVKRVENLQASLDTWRDFLTRILGLIGEYERLTSDLHKMYSKTQDDISSYTDEEKLSRPQLKKIIDKYTDLRTKIEKSETQIEALSVIQEQLKECLSPQDMRIVNQRIWQLRQQRADLEHQLSIIIHRLQERLEIYAIFDTRFKRFTEWITTVETRLETSGSSSSDITALDPHDLIRRLNADVQAETAMKEREFEWLSETGSSLIEVAKKEEKSYSKNTSKQLKDMEERWRKLQETGRSRIVKITELLETITQLEERLTEIRIKLHVIESKLTTTVILEYLTTKSVDEKFKERDDTHKEIEAESGEVCETLNLCDLVFNDPDVLKGNFDLRNLRTGVDIVEKKWKNICDTSEHRKNTLKEIRKSAELSSSVLPKFVKKLDSIEKRVEKIETRKQRGEHEDETVSKAVIKDLEALEPNLKRIEDAYSRVASARGVELRGQGADEAAKMRSAIRRWQQLRGRVDAAGADVHRQFVAAHGKAVVALAEVDVRLTRALHLAPTPLDKEATLKELELVEKELAECQALVDDADRLAAKVSTAQGVSEMVAEYRALYADVRLRLDLARAEVVGDVDTAVQVDTLKWETDAALQVDTLTSKETYRAELASAVRDTSEALEVLELALQQQLKDNAGSDELAAAAKEIAKAGAKPGQTLELAKHLSELLLTECDATEDEAMMKEVESLSLRYEDLLTQAKKRELQINNLSESGRLTCPLCSERNWKQLDNDLWRLEQWLQFAEATEASRTEPPEQYDLLEDAIQDHREFLLDLDSHKSIVVSLNVVGGHVAAHAHDARDAARVRARLAAANARWDRACALAADRQKLLQHALVHNRQFHDIVVELVAQLAAAERGVRGREPLRLSRPADELQRDFRRFSELRDELQRAEPRVHALHDAAQLLRTEDAPPHSDDICRRLAELRLRLQSLRKLSGVYALKLGAALARRPARPAPAPASAALAAAALAAAPQLMEEEDEELSTMTLPPFDENEAEADEPASEEETLSGMQRGLRFVCRVARASLPFQALLLLVLGAAALAPHARTECRGGLDPVLPVLRYPHGPPPL

Uniprot

H9JLS0   A0A1E1WEX9   A0A2A4K5N4   A0A2A4K507   A0A2W1BG96   A0A2H1VHU2   + More
A0A194QMV9   A0A194PHT3   A0A3S2P852   S4P231   A0A139WB86   A0A139WBA3   F4WE47   A0A1Y1KSX3   A0A1Y1KUH4   A0A2J7PKB3   A0A067QJW7   A0A1Y1KS42   A0A232FGF1   A0A2J7PKB2   A0A158NAJ8   K7IR54   A0A1B6DG88   A0A1B6E5A8   A0A1B6CXV6   A0A1B6DMW6   A0A1B6CV70   N6U3Z2   A0A2A3E623   A0A1B6D4Z1   A0A0K8VI29   A0A0K8ULV4   A0A0K8W5S8   A0A0K8UT28   A0A034V3H3   W8ACW0   A0A1I8NZ30   A0A1I8NZ48   A0A1I8NZ28   A0A1I8NZ37   T1PF00   A0A1I8NZ29   A0A1I8NZ34   T1PF45   A0A1I8NZ33   A0A1I8NZ39   A0A1I8NZ32   Q86NN0   A0A1I8NZ53   A0A1I8MJ32   T1PFA7   A0A1I8NZ27   A0A1I8NZ35   Q71JA7   A0A0Q5W9I9   A0A0Q5WL44   M9PCM8   A0A0Q5W9E3   A0A0Q5WML9   A0A0Q5W9W9   A0A0Q5WLN5   A0A0Q5WIA3   A0A0Q5W9M2   M9MRF5   A0A0Q5WIM2   M9MRD1   M9PC84   A0A0Q5W9E6   B4I1D8   A0A0J9QX12   A0A0J9TG08   M9PEP8   A0A0R1DPS7   A0A0P8XW67   A0A0R1DK94   A0A0Q9X1R5   A0A0R1DKF4   A0A0Q9X345   A0A0R1DLC2   A0A0R1DK77   A0A0R1DKK7   M9PC23   A0A0Q5WGF6   A0A0Q5W943   M9MRD6   A0A0J7KHX8   A0A1W4UVD8   A0A0K8VNW4   A0A0R1DKM4   A0A0R1DKF0   A0A0C9Q0K0   A0A0R1DK70   A0A0C9R924   A0A0Q9WG99   A0A0R1DKG6   A0A0R1DKC6   A0A0R1DRR2   A0A0R1DML2   A0A0R1DRN5  

Pubmed

19121390    28756777    26354079    23622113    18362917    19820115    + More
21719571    28004739    24845553    28648823    21347285    20075255    23537049    25348373    24495485    25315136    12408964    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    17550304   

EMBL

BABH01005183    GDQN01005511    JAT85543.1    NWSH01000120    PCG79336.1    PCG79335.1    + More
KZ150161    PZC72704.1    ODYU01002637    SOQ40398.1    KQ461194    KPJ06862.1    KQ459603    KPI92976.1    RSAL01000003    RVE54732.1    GAIX01012210    JAA80350.1    KQ971372    KYB25172.1    KYB25173.1    GL888102    EGI67485.1    GEZM01079111    JAV62516.1    GEZM01079110    JAV62517.1    NEVH01024940    PNF16770.1    KK853251    KDR09330.1    GEZM01079112    JAV62515.1    NNAY01000242    OXU29765.1    PNF16774.1    ADTU01000006    ADTU01000007    ADTU01000008    GEDC01012591    JAS24707.1    GEDC01004185    JAS33113.1    GEDC01019215    JAS18083.1    GEDC01010252    JAS27046.1    GEDC01019926    JAS17372.1    APGK01050252    APGK01050253    APGK01050254    APGK01050255    APGK01050256    APGK01050257    APGK01050258    APGK01050259    APGK01050260    APGK01050261    KB741169    ENN73302.1    KZ288363    PBC26934.1    GEDC01016570    JAS20728.1    GDHF01013755    JAI38559.1    GDHF01024637    JAI27677.1    GDHF01005897    JAI46417.1    GDHF01022641    JAI29673.1    GAKP01022652    JAC36300.1    GAMC01020795    GAMC01020794    GAMC01020793    JAB85760.1    KA647373    KA647375    KA647377    AFP62006.1    KA647417    AFP62046.1    BT004506    AAO42670.1    KA647372    KA647374    KA647376    AFP62003.1    AF495912    AAN60444.1    CH954177    KQS70163.1    KQS70162.1    AE014134    AGB92625.1    KQS70166.1    KQS70168.1    KQS70164.1    KQS70170.1    KQS70171.1    KQS70172.1    ADV36946.1    KQS70169.1    ADV36944.1    AGB92626.1    KQS70161.1    CH480820    EDW54345.1    CM002910    KMY88259.1    KMY88260.1    AGB92627.1    CM000157    KRJ97730.1    CH902620    KPU73618.1    KRJ97735.1    CH963920    KRF98693.1    KRJ97724.1    KRF98695.1    KRJ97726.1    KRJ97719.1    KRJ97720.1    AGB92624.1    KQS70165.1    KQS70167.1    ADV36947.1    LBMM01007303    KMQ89862.1    GDHF01011766    JAI40548.1    KRJ97736.1    KRJ97722.1    GBYB01007388    JAG77155.1    KRJ97723.1    GBYB01009357    JAG79124.1    CH940649    KRF81287.1    KRJ97738.1    KRJ97732.1    KRJ97721.1    KRJ97725.1    KRJ97728.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000283053    UP000007266    + More
UP000007755    UP000235965    UP000027135    UP000215335    UP000005205    UP000002358    UP000019118    UP000242457    UP000095300    UP000095301    UP000008711    UP000000803    UP000001292    UP000002282    UP000007801    UP000007798    UP000036403    UP000192221    UP000008792   

PRIDE

H9JLS0    Q86NN0    Q71JA7    M9PCM8    M9MRF5    M9MRD1    + More
M9PEP8    M9PC23    M9MRD6   

Pfam

PF00435   Spectrin        + More
PF10541   KASH
PF00307   CH

Interpro

IPR002017   Spectrin_repeat        + More
IPR012315   KASH       
IPR018159   Spectrin/alpha-actinin       
IPR001589   Actinin_actin-bd_CS       
IPR036872   CH_dom_sf       
IPR001715   CH-domain       

SUPFAM

SSF47576   SSF47576       

Gene 3D

1.10.418.10    

CDD

cd00014  CH

ProteinModelPortal

H9JLS0   A0A1E1WEX9   A0A2A4K5N4   A0A2A4K507   A0A2W1BG96   A0A2H1VHU2   + More
A0A194QMV9   A0A194PHT3   A0A3S2P852   S4P231   A0A139WB86   A0A139WBA3   F4WE47   A0A1Y1KSX3   A0A1Y1KUH4   A0A2J7PKB3   A0A067QJW7   A0A1Y1KS42   A0A232FGF1   A0A2J7PKB2   A0A158NAJ8   K7IR54   A0A1B6DG88   A0A1B6E5A8   A0A1B6CXV6   A0A1B6DMW6   A0A1B6CV70   N6U3Z2   A0A2A3E623   A0A1B6D4Z1   A0A0K8VI29   A0A0K8ULV4   A0A0K8W5S8   A0A0K8UT28   A0A034V3H3   W8ACW0   A0A1I8NZ30   A0A1I8NZ48   A0A1I8NZ28   A0A1I8NZ37   T1PF00   A0A1I8NZ29   A0A1I8NZ34   T1PF45   A0A1I8NZ33   A0A1I8NZ39   A0A1I8NZ32   Q86NN0   A0A1I8NZ53   A0A1I8MJ32   T1PFA7   A0A1I8NZ27   A0A1I8NZ35   Q71JA7   A0A0Q5W9I9   A0A0Q5WL44   M9PCM8   A0A0Q5W9E3   A0A0Q5WML9   A0A0Q5W9W9   A0A0Q5WLN5   A0A0Q5WIA3   A0A0Q5W9M2   M9MRF5   A0A0Q5WIM2   M9MRD1   M9PC84   A0A0Q5W9E6   B4I1D8   A0A0J9QX12   A0A0J9TG08   M9PEP8   A0A0R1DPS7   A0A0P8XW67   A0A0R1DK94   A0A0Q9X1R5   A0A0R1DKF4   A0A0Q9X345   A0A0R1DLC2   A0A0R1DK77   A0A0R1DKK7   M9PC23   A0A0Q5WGF6   A0A0Q5W943   M9MRD6   A0A0J7KHX8   A0A1W4UVD8   A0A0K8VNW4   A0A0R1DKM4   A0A0R1DKF0   A0A0C9Q0K0   A0A0R1DK70   A0A0C9R924   A0A0Q9WG99   A0A0R1DKG6   A0A0R1DKC6   A0A0R1DRR2   A0A0R1DML2   A0A0R1DRN5  

KEGG

101737504    K19326 nesprin-1 | (RefSeq) nesprin-1-like

GO

GO:0016021   GO:0090286   GO:0034993   GO:0051015   GO:0005737   GO:0007097   GO:0005640   GO:0051647   GO:0060361   GO:0048471   GO:0008092   GO:0051646   GO:0040011   GO:0051643   GO:0007498   GO:0006997   GO:0034453   GO:0030018   GO:0007303   GO:0007523   GO:0008335   GO:0016477   GO:0005635   GO:0007015   GO:0007519   GO:0005829   GO:0019901   GO:0003779   GO:0005884   GO:0005515   GO:0003777   GO:0007018   GO:0030286   GO:0004319   GO:0004320   GO:0016295   GO:0016296  

Length:

1396

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.55403

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.00003

outside

1  -  1396

 

 

Pi

172.988368

Theta

171.170073

Tajima's D

-1.505515

CLR

17.626904

CSRT

0.0627468626568672

Interpretation

Uncertain